BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg945083 Length=1202 Score E Sequences producing significant alignments: (Bits) Value AT5G39560.1 | Symbols: | Galactose oxidase/kelch repeat superf... 108 2e-22 > AT5G39560.1 | Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr5:15841692-15843169 REVERSE LENGTH=1478 Length=1478 Score = 108 bits (58), Expect = 2e-22 Identities = 122/152 (80%), Gaps = 8/152 (5%) Strand=Plus/Plus Query 714 CAATGCTTTCCAAGGAAAGCTTTATGTAAG-GGGAGATACAAAGGACTACACTTACGAGC 772 ||||||||| ||||||||||||| || || || | | | ||| |||||||||||||||| Sbjct 820 CAATGCTTTGGAAGGAAAGCTTTACGT-AGCGGCACAGATAAATGACTACACTTACGAGC 878 Query 773 CGAAAGAAGGTACATGGGAAGTTGTTAAAGAGAAAGCAAGT-GCA-TATA-TAGAGGTTT 829 | ||||| | ||||||| |||||| | ||| ||| ||||| | | | || |||||| Sbjct 879 CCAAAGATGATACATGGAAAGTTG-T-AAG-CAAATCAAGTATAAGAAGAGTAAAGGTTT 935 Query 830 GGTGTGTGATAGAGAATGTAATTTATGGTTGC 861 |||||||||||||||||||||| || | |||| Sbjct 936 GGTGTGTGATAGAGAATGTAATGTACGCTTGC 967 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59035840920 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5