BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg945124 Length=367 Score E Sequences producing significant alignments: (Bits) Value AT4G29020.1 | Symbols: | glycine-rich protein | chr4:14304921-... 372 1e-102 > AT4G29020.1 | Symbols: | glycine-rich protein | chr4:14304921-14305721 FORWARD LENGTH=801 Length=801 Score = 372 bits (201), Expect = 1e-102 Identities = 211/216 (98%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 152 ggtcttggcggtggtgtaggtggtcttggcggtgtaggtggtctaggtggtggttcaggt 211 ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 370 GGTCTAGGCGGTGGTGTAGGTGGTCTTGGCGGTCTAGGTGGTCTAGGTGGTGGTTCAGGT 429 Query 212 cttggtcatggagtaggtggaattggtggtgACCCTGGTATTGGTAGTGGTATCGGTGGA 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 430 CTTGGTCATGGAGTAGGTGGAATTGGTGGTGACCCTGGTATTGGTAGTGGTATCGGTGGA 489 Query 272 CTAGGCGGTGCAGGTGGTCTAGGCGGTATAGGCGGTGTTGGTGGTTTGGGTGGAGTTGGC 331 || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 490 CTCGGCGGTGCAGGTGGTCTAGGCGGTATAGGCGGTGTTGGTGGTTTGGGTGGAATTGGC 549 Query 332 GGTGGAAGCGATTGCGGTGGCGTAATTCCACACCAT 367 ||||||||||||||||||||||||||||| |||||| Sbjct 550 GGTGGAAGCGATTGCGGTGGCGTAATTCCTCACCAT 585 Score = 185 bits (100), Expect = 2e-46 Identities = 129/142 (91%), Gaps = 5/142 (4%) Strand=Plus/Plus Query 11 AAGAGAAGAGATGGCAATTAGGTGTTTATCCGTGTTCCTCGTTGCCT-TCATGGTGGCTC 69 ||| |||||||||||| ||||||||||| ||||||||||||||| || |||||||| ||| Sbjct 103 AAG-GAAGAGATGGCAGTTAGGTGTTTAGCCGTGTTCCTCGTTG-CTCTCATGGTGTCTC 160 Query 70 AAGCAGTCACCGCAACAAGACCGATTCCAGCCAAGAATGTCGGAGCTGGTCTTGACGACC 129 ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct 161 AAGCAGTCACCGCAACAAGACCGGCTCCAACCAAGAATGTCGGAGCTGGTCTTGACGACC 220 Query 130 AAAAGA-CGTTTGGGGCGTTCG 150 |||||| | |||| ||||||| Sbjct 221 AAAAGAAC-TTTGTAGCGTTCG 241 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17241837907 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5