BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg945393
Length=2116
Score E
Sequences producing significant alignments: (Bits) Value
AT4G26700.1 | Symbols: ATFIM1, FIM1 | fimbrin 1 | chr4:13463544... 3278 0.0
AT5G55400.1 | Symbols: | Actin binding Calponin homology (CH) ... 1755 0.0
> AT4G26700.1 | Symbols: ATFIM1, FIM1 | fimbrin 1 | chr4:13463544-13467599
FORWARD LENGTH=2453
Length=2453
Score = 3278 bits (1775), Expect = 0.0
Identities = 2003/2112 (95%), Gaps = 19/2112 (1%)
Strand=Plus/Plus
Query 2 GTGAATGGTAAAACAGTGAGAGATGTCTGGGTTCGTGGGTGTTGTCCTTTCGGATCCATG 61
||||||||||| |||||||||||||||||||| ||||||||||||| |||| ||||||||
Sbjct 195 GTGAATGGTAAGACAGTGAGAGATGTCTGGGTACGTGGGTGTTGTCGTTTCTGATCCATG 254
Query 62 GCTACAGAGCCAGTTCACTCAAGTCGAACTTCGGACTCTCAATTCCAAGTATGTGTCTAT 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 255 GCTACAGAGCCAGTTCACTCAAGTCGAACTTCGGACTCTCAATTCCAAGTATGTGTCGGT 314
Query 122 GAAGAATCAGAGTGGAAAGATCACTATTGAATATCTCCCTCCTCTATTGGCAAAGCTCAA 181
||||||||||| ||||||| ||||||||||| |||||||||||||||| |||||||| ||
Sbjct 315 GAAGAATCAGAATGGAAAGGTCACTATTGAAGATCTCCCTCCTCTATTTGCAAAGCTGAA 374
Query 182 GGCACTTAGTGCAACATTTAAGGAGGATGAAATCAAGGGGATACTAGGGGAAGTGGGTTC 241
|||||||||||||||||||||||| || ||||||||||| || ||||||||| |||||||
Sbjct 375 GGCACTTAGTGCAACATTTAAGGAAGACGAAATCAAGGGTATGCTAGGGGAATTGGGTTC 434
Query 242 TGATACAAGCACTGATGTGAGTTTTGAAGAGTTTCTCAAGATATATCTCAACTTACTAAG 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 435 TGATACAAGCACTGATGTGAGTTTTGAAGAGTTTCTCAAGATATATCTCAACTTACTAAG 494
Query 302 TAAAGCAGCTGAGAAATCTGGTGG---TCATAAGAACTCATCCTCGTTTCTTAAATCTTG 358
|||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||
Sbjct 495 TAAAGCAGCTGAGAAATCTGGTGGTCATCATAAGAACTCATCCTCGTTTCTGAAAGCTTG 554
Query 359 TACAACGACACTTCTTCACACTATATATCAGTCGGAGAAGGGTTCTTTTGTTCAGCACAT 418
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 555 TACAACGACACTTCTTCACACTATATATCAGTCGGAGAAGGGTCCTTTTGTTCAGCACAT 614
Query 419 CAATAGATATCTTA-AGGATGACCCCTTTTTGAAGCAGTTCCTTCCTCTTGACCCTCATT 477
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 615 CAATAGATATC-TAGGGGATGACCCCTTTTTGAAGCAGTTCCTTCCTCTTGACCCTCATT 673
Query 478 CTAATGAATTGTATGAACTTGTGAAAGATGGTGTACTTCTTTGTAAGCTTATAAATGTAG 537
||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 674 CTAATCAATTGTATGAACTTGTGAAAGATGGTGTCCTTCTATGTAAGCTTATAAATGTAG 733
Query 538 CAGTTCCTGGGACAATAGATGAACGAGCGATCAACACGAAGAGGGTACTTAATCCGTGGG 597
| ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 734 CTGTTCCCGGGACAATTGATGAACGAGCGATCAACACTAAGAGGGTACTTAATCCGTGGG 793
Query 598 AGAGAAATGAGAATCACACGCTTTGTCTAAACTCTGCTAAAGCTATTGGATGCTCTGTTG 657
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct 794 AGAGAAATGAGAATCACACGCTTTGTCTCAACTCTGCTAAAGCTGTTGGATGCTCTGTTG 853
Query 658 TTAATATTGGGACACAGGACCTTGCCGAAGGACGGCCTCACCTGGTGCTTGGATTGATTT 717
|||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 854 TTAATATTGGCACACAAGACCTGGCCGAAGGACGGCCTCACCTGGTGCTCGGATTGATTT 913
Query 718 CACAACTCATAAAGATTCAACTACTTGCTGATCTCAATTTAAAGAAGACGCCTCAGCTTG 777
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 914 CACAACTCATAAAGATTCAAGTACTTGCTGATCTCAATTTAAAGAAGACGCCTCAGCTTG 973
Query 778 TTGAGCTGCTTGAGGACAGCGATGATGTCGAGGAGTTGCTGAGATTACCCCCTGAGAAAG 837
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 974 TTGAGTTGCTTGAGGACAGCGATGATGTCGAGGAGTTGCTGAGATTACCCCCTGAGAAAG 1033
Query 838 TCTTACTGAAATGGATGAACTTCCATCTTAAGAAAGGGGGTTACAAGAAAACTGTCTCAA 897
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1034 TCTTACTGAAATGGATGAACTTCCATCTTAAGAAAGGGGGTTACAAGAAAACCGTCTCAA 1093
Query 898 ACTTTTCCGCAGATTTGAAGGATGCACAAGCCTATGCCTTTCTGCTCAATGTTCTCGCAC 957
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1094 ACTTTTCCGCAGATTTGAAGGATGCACAAGCGTATGCCTTTCTGCTCAATGTTCTCGCAC 1153
Query 958 CTGAACACTGTGACCCGGCTACACTAGATGCAAAGGATCCTCTTGAAAGGGCTGAACTGG 1017
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 1154 CTGAACACTGTGACCCGGCTACACTAGATGCAAAGGATCCTCTTGAAAGAGCTGAATTGG 1213
Query 1018 TTCTCAGTCATGCAGAGAGAATGAACTGCAAGCGATACTTGACTGCAGAAGAGATCGTTG 1077
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1214 TTCTCAGTCATGCAGAGAGAATGAACTGCAAGCGATACTTGACTGCAGAGGAGATCGTTG 1273
Query 1078 AAGGATCTCCAACTTTGAATCTTGCCTTTGTGGCACAAATATTCCATGAAAGGAATGGTC 1137
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1274 AAGGATCTTCAACTTTGAATCTTGCCTTTGTGGCACAAATCTTCCATGAAAGGAATGGTC 1333
Query 1138 TAAATACCGATGGTAAGTATTCATTTGCGGAGATGATGACCGAAGATGTACAGACTTGTA 1197
|||| | |||||||||||| ||||||||||||||||||||||||| ||| |||||||||
Sbjct 1334 TAAACAAGGATGGTAAGTATGCATTTGCGGAGATGATGACCGAAGACGTAGAGACTTGTA 1393
Query 1198 GAGAGGAACGATGCTACCGGCTATGGATCAACAGCCTGGGGATTGACATTTATGTCAATA 1257
|||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct 1394 GAGATGAACGATGCTACCGGCTATGGATCAACAGCCTCGGGATTGACAGTTATGTCAATA 1453
Query 1258 ATGTATTTGAAGATGTTAGAAATGGATGGATTCTTCTTGAAGTTCTTGACAAGATCTCTC 1317
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 1454 ATGTATTTGAAGATGTTAGAAATGGATGGATTCTTCTTGAGGTTCTTGACAAGGTCTCTC 1513
Query 1318 CCGGTTCAGTCAACTGGAAGCATGCTTCCAAACCGCCAATTAAGATGCCGTTTAGAAAAG 1377
|| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 1514 CCAGTTCAGTCAACTGGAAGCATGCTTCCAAACCACCGATTAAGATGCCGTTTAGAAAAG 1573
Query 1378 TAGAGAACTGCAATCAAGTCGTAAAGATCGGGAAACAGCTAAAATTCTCACTTGTGAATG 1437
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct 1574 TAGAGAACTGCAATCAAGTCATAAAGATCGGGAAACAGCTAAAATTCTCACTTGTAAATG 1633
Query 1438 TAGCTGGAAATGATATAGTTCAAGGGAATAAGAAACTCATTCTTGGTCTCTTATGGCAGT 1497
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1634 TAGCTGGAAATGACATAGTTCAAGGGAATAAGAAGCTCATTCTTGGTCTCTTATGGCAGT 1693
Query 1498 TGATGAGATTCCATATGCTCCAACTTCTCAAGAGTCTCCGATCTCGGACACAAGGTAAAG 1557
|||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct 1694 TGATGAGATTCCATATGCTCCAACTTCTCAAGAGTCTCAGATCTCGGACACTAGGTAAAG 1753
Query 1558 AGATGACTGATGCGGATATCCTCAGCTGGGCCAACAGGAAAGTACGAACCATGGGGCGAA 1617
||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||
Sbjct 1754 AGATGACTGATGCAGATATCCTCAGCTGGGCCAACAGGAAAGTAAGAACAATGGGACGAA 1813
Query 1618 AATTGCAAATCGAGAGTTTCAAGGACAAGAGTCTATCGAGCGGGGTATTCTTCCTCAACC 1677
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 1814 AATTGCAAATCGAGAGTTTCAAGGACAAGAGTCTATCGAGTGGGTTATTCTTCCTCAACC 1873
Query 1678 TTTTATGGGCGGTTGAGCCAAGAGTTGTAAACTGGAATCTTGTCACCAAGGGTGAAACAG 1737
|| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1874 TTCTATGGGCGGTTGAACCAAGAGTTGTGAACTGGAATCTTGTCACCAAGGGTGAAACAG 1933
Query 1738 ATGATGAGAAAAGGTTGAATGCTACATACATAGTTAGCGTCGCAAGAAAGCTCGGTTGTT 1797
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1934 ATGATGAGAAGAGGTTGAATGCTACATACATAGTTAGTGTCGCAAGAAAGCTCGGTTGTT 1993
Query 1798 CGGTTTTCTTGTTGCCTGAAGATATTGTGGAGGTGAATCAGAAGATGATTTTAATCTTAA 1857
||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| ||||
Sbjct 1994 CGGTTTTCTTGTTACCTGAAGATATCGTGGAGGTGAATCAGAAGATGATCCTAATTTTAA 2053
Query 1858 CGGCAAGTATAATGTACTGGAGTCTTCAGAGACATTCACCGGAGAGTTCTGATTCGTCGT 1917
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct 2054 CGGCAAGTATAATGTACTGGAGTCTTCAGAGACATTCACGGGAGAGTTCAGATTCGTCGT 2113
Query 1918 CAACTCAGAGCACCACAACGACGTGCACCAGCACAGCCGCGTCCCCTGCTCTATCTGTCA 1977
|||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||
Sbjct 2114 CAACTCAGAGCACCACAACGACGTGCACCAGCACAGCCTCGTCCCCTGCCCCATCTGTCA 2173
Query 1978 CAGAAGAGGAGGAAGTCTCCTCATTGAG-GAGTGAAGTCTCGTGCTTGGCCATTGATGAT 2036
|||||||||||||||||||||||||||| | |||||||| || |||||||| ||| | |
Sbjct 2174 CAGAAGAGGAGGAAGTCTCCTCATTGAGCG-GTGAAGTCACGAGCTTGGCCGTTG--G-T 2229
Query 2037 AACGATGCAGATGCGGTTTCAGACATCACCACTGTCTCAGAGGAAGCAGCCATCGAATAG 2096
||||| | | |||| || |||||||| ||||||||||||||| |||||||||||
Sbjct 2230 ---GATGC-G--G---TTTCTGAAATCACCACGGTCTCAGAGGAAGCATCCATCGAATAG 2280
Query 2097 AGAGAGCGAGAT 2108
||||||||||||
Sbjct 2281 AGAGAGCGAGAT 2292
> AT5G55400.1 | Symbols: | Actin binding Calponin homology (CH)
domain-containing protein | chr5:22455535-22458950 REVERSE
LENGTH=2145
Length=2145
Score = 1755 bits (950), Expect = 0.0
Identities = 1590/1895 (84%), Gaps = 60/1895 (3%)
Strand=Plus/Plus
Query 24 ATGTCTGGGTTCGTGGGTGTTGTCCTTTCGGATCCATGGCTACAGAGCCAG-TTCACTCA 82
|||||||| || ||||||||| | |||||||||||||| |||| || ||| || || ||
Sbjct 1 ATGTCTGGTTTTGTGGGTGTTATTGTTTCGGATCCATGGTTACAAAGTCAGCTT-ACACA 59
Query 83 AGTCGAACTTCGGACTCTCAATTCCAAGTATG-TGTC-TATGAAGAATCAGAGTGGAAAG 140
||| || || ||| ||| |||||||||| || || | | |||||||||||||||| |||
Sbjct 60 AGTTGAGCTAAGGAGTCTTAATTCCAAGTTTGTTG-CGT-TGAAGAATCAGAGTGGTAAG 117
Query 141 ATCACTATT-GAATATC-TCCCTCCTCTATTGG-CAAAGCTCAAGGCACTTAGTGCAACA 197
| || ||| || ||| ||| | || | |||| | ||| | ||| |||||||| || ||
Sbjct 118 GTTAC-ATTAGAGGATCTTCCAT-CTGTGTTGGTC-AAGGTGAAGTCACTTAGTTCATCA 174
Query 198 TTTAAGGAGGATGAAATCAAGGGGATACTAGGGGAAG--TGGGTTCTGA-TA--CAAG-C 251
||||||||| | |||||||| | || || |||| | |||||||||| || |||
Sbjct 175 TTTAAGGAGAAAGAAATCAAAGAAAT-CT-TGGGAGGTTTGGGTTCTGATTATGAAAGTG 232
Query 252 ACTGATG----TGAGTTTTGAAGAGTTTCTCAAGATATATCTCAACTTACTAAG-TAAAG 306
| ||||| ||| ||| ||| |||||||||| ||||||| ||||| | || |||||
Sbjct 233 A-TGATGATCTTGA-TTTCGAATCGTTTCTCAAGGTATATCTAAACTTGC-GAGATAAAG 289
Query 307 CAGCTGAGAAA--T-CTGGTGGTCATAAGAACTCATCCTCGTTTCTTAAATCTTGTACAA 363
| ||||| ||| | |||||||| |||| | ||||| || ||||||||| | | || |
Sbjct 290 CTGCTGATAAAGCTGGTGGTGGTCTTAAGCATTCATCTTCATTTCTTAAAGCCGGCACTA 349
Query 364 CGACACTTCTTCACACTATATATCAGTCGGAGAAGGGTTCTTTTGTTCAGCACATCAATA 423
|| || |||||| || ||| | ||||| ||||||||||||||||||| ||||||||||
Sbjct 350 CG--AC-TCTTCATACCATAAACCAGTCAGAGAAGGGTTCTTTTGTTCTTCACATCAATA 406
Query 424 GATATCTTAAGGATGACCCCTTTTTGAAGCAGTTCCTTCCTCTT-GACCCTCATTCTAAT 482
|||||||| ||||||||| ||||||||||| || |||||| || || || |||| |||
Sbjct 407 GATATCTTGGGGATGACCCGTTTTTGAAGCAATTTCTTCCT-TTAGATCCGGATTCAAAT 465
Query 483 GAATTGTATGAACTTGTGAAAGATGGTGTACTTCTT-TGTAAGCTTATAAATGTAGCAGT 541
|| |||||||||||||||||||||||||| ||| || ||||||||||||||| |||||||
Sbjct 466 GATTTGTATGAACTTGTGAAAGATGGTGTGCTT-TTATGTAAGCTTATAAATATAGCAGT 524
Query 542 TCCTGGGACAATAGATGAACGAGCGATCAACACGAAGAGGGTACTTAATCCGTGGGAGAG 601
|||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||
Sbjct 525 TCCTGGGACAATAGATGAACGAGCGATCAACACGAAAAGGGTACTTAACCCATGGGAGAG 584
Query 602 AAATGAGAATCACACGCTTTGTCTAAACTCTGCTAAAGCTATTGGATGCTCTGTTGTTAA 661
|||||||||||||||||| ||||| |||||||| |||||| |||| ||| ||| |||||
Sbjct 585 AAATGAGAATCACACGCTCTGTCTTAACTCTGCAAAAGCTGTTGGCTGCAGTGTGGTTAA 644
Query 662 TATTGGGACACAGGACCTTGCCGAAGGACGGCCTCACCTGGTGCTTGGATTGATTTCACA 721
||| ||||| |||||||| || |||||||| ||||| ||||||||||||||||| |||||
Sbjct 645 TATCGGGACTCAGGACCTGGCTGAAGGACGACCTCATCTGGTGCTTGGATTGATCTCACA 704
Query 722 ACTCATAAAGATTCAACTACTTGCTGATCTCAATTTAAAGAAGACGCCTCAGCTTGTTGA 781
|||||||||||||||||| ||||| ||||| | ||||||||||| |||||||||||||||
Sbjct 705 ACTCATAAAGATTCAACTGCTTGCCGATCTTAGTTTAAAGAAGATGCCTCAGCTTGTTGA 764
Query 782 GCTGCTTGAGGACAGCGATGATGTCGAGGAGTTGCTGAGATTACCCCCTGAGAAAGTCTT 841
| || | ||||||| ||| ||| | || || || |||||||||||||| |||||||||||
Sbjct 765 GTTGGTGGAGGACAACGAGGATATAGAAGAATTTCTGAGATTACCCCCAGAGAAAGTCTT 824
Query 842 ACTGAAATGGATGAACTTCCATCTTAAGAAAGGGGGTTACAAGAAAACTGTCTC-AAACT 900
|| |||||||||||||||||||| |||||||| |||||||| |||||||| | ||| |
Sbjct 825 GCTCAAATGGATGAACTTCCATCTCAAGAAAGGTGGTTACAAAAAAACTGT-TGGAAATT 883
Query 901 TTTCCGCAGATTTGAAGGATGCACAAGCCTATGCCTTTC-TGCTCAATGTTCTCGCACCT 959
|||| | ||| ||||||| ||||| |||||||| || | |||| ||||||||||||||
Sbjct 884 TTTCATCGGATCTGAAGGACGCACAGGCCTATGC-TTACCTGCTTAATGTTCTCGCACCA 942
Query 960 GAACACTGTGACCCGGCTACACTAGATGCAAAGGATCCTCTTGAAAGGGCTGAAC-TGGT 1018
|| || ||||| || || || ||| ||||| ||||| ||||||||||||| ||| ||||
Sbjct 943 GAGCATTGTGATCCAGCAACTCTAAATGCAGAGGATGATCTTGAAAGGGCT-AACATGGT 1001
Query 1019 TCTC-AGTCATGCAGAGAGAATGAACTGCAAGCGATACTTGACTGCAGAAGAGATCGTTG 1077
||| | || |||||||||||||||||||| || || ||||||||||| ||||| ||||
Sbjct 1002 CCTCGAA-CACGCAGAGAGAATGAACTGCAAACGGTATTTGACTGCAGAGGAGATAGTTG 1060
Query 1078 AAGGATCTCCA-ACTTTGAATCTTGCCTTTGTGGCACAAATATTCCATGAAAGGAATGGT 1136
| || ||| | | ||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct 1061 AGGGGTCTTCGTA-TTTGAATCTAGCATTTGTGGCACAGATATTTCATGAAAGGAATGGC 1119
Query 1137 CTAAATACCGATGGTA-AGTATTCATTTGCGGAGATGATGACCGAAGATGTACAGACTTG 1195
|| | || ||||||| | | | | ||||||||||||||||| || ||| ||||||||||
Sbjct 1120 CTTAGCACTGATGGTAGATTCTCC-TTTGCGGAGATGATGACTGAGGATTTACAGACTTG 1178
Query 1196 TAGAGAGGAACGATGCTACCGGCTATGGATCAACAGCCTGGGGATTGACATTTATGTCAA 1255
||||| ||| |||| |||||||||||||| |||||||| |||||||| | ||| |||||
Sbjct 1179 CAGAGACGAAAGATGTTACCGGCTATGGATTAACAGCCTCGGGATTGAGAGTTACGTCAA 1238
Query 1256 TAATGTATTTGAAGATGTTAGAAATGGATGGATTCTTCTTGAAGTTCTTGACAAGATCTC 1315
|||||| ||||||||||||||||| |||||||||||||| |||||| |||| ||| |||
Sbjct 1239 TAATGTGTTTGAAGATGTTAGAAACGGATGGATTCTTCTGGAAGTTGTTGATAAGGTCTA 1298
Query 1316 TCCCGGTTCAGTCAACTGGAAGCATGCTTCCAAACCGCCAATTAAGATGCCGTTTAGAAA 1375
||| || ||||| ||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct 1299 TCCAGGCTCAGTTAACTGGAAGCAGGCTTCAAAACCACCAATTAAGATGCCGTTTAGAAA 1358
Query 1376 AGTAGAGAACTGCAATCAAGTCGTAAAGATCGGGAAACAGCTAAAATTCTCACTTGTGAA 1435
||||||||| |||||||||||||| ||||| |||||| || | | |||||| || || ||
Sbjct 1359 AGTAGAGAATTGCAATCAAGTCGTGAAGATTGGGAAAGAGATGAGATTCTCGCTCGTAAA 1418
Query 1436 TGTAGCTGGAAATGATATAGTTCAAGGGAATAAGAAA-CTCATTCTTGGTCT-CTTATGG 1493
||||||||||||||| || |||||||| ||||| ||| || || || || || |||||||
Sbjct 1419 TGTAGCTGGAAATGACATTGTTCAAGGAAATAA-AAAGCTTATCCTCGG-CTTCTTATGG 1476
Query 1494 CAGTTGATGAGATTC-CATATGCTCCAACTTCTCAAGAGTCTCCGATCTCGGACACAAGG 1552
|||||||||||| | |||||||||||||||||||||||||| |||||||||||| |||
Sbjct 1477 CAGTTGATGAGAA-CACATATGCTCCAACTTCTCAAGAGTCTAAGATCTCGGACACGAGG 1535
Query 1553 TAAAGAGATGACTGA-TGCGGATATCCTCAGCTGGGCCAACAGGAAAGT-ACGAACCATG 1610
||||| ||||| || | | || ||| | |||||||| ||||||||||| | ||| ||||
Sbjct 1536 AAAAGACATGACCGACT-CAGAAATCATAAGCTGGGCTAACAGGAAAGTCA-GAATCATG 1593
Query 1611 GGGCGAAAATTGCAAATCGAGAGTTTCAAGGACAAGAGTCTATCGAGCGGGGTATTCTTC 1670
||||| |||| ||| ||||| || |||||||| || |||||||||||||| ||||||||
Sbjct 1594 GGGCGGAAATCGCAGATCGAAAGCTTCAAGGATAAAAGTCTATCGAGCGGATTATTCTTC 1653
Query 1671 CTCAACCTTTTATGGGCGGTTGAGCCAAGAGTTGTAAACTGGAATCTTGTCACCAAGGGT 1730
||| | ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1654 CTCGATCTTCTATGGGCGGTTGAGCCAAGAGTTGTTAACTGGAATCTTGTCACCAAGGGT 1713
Query 1731 GAAACAGATGATGAGAAAAGGTTGAATGCTACATACATAGTTAGCGTCGCAAGAAAGCTC 1790
||| |||| |||||||| || ||||||||||||||||| || ||||| |||||||||||
Sbjct 1714 GAATCAGACGATGAGAAGAGATTGAATGCTACATACATTGTCAGCGTAGCAAGAAAGCTT 1773
Query 1791 GGTTGTTCGGTTTTCTTGTTGCCTGAAGATATTGTGGAGGTGAATCAGAAGATGATTTTA 1850
||||| ||||||||||||||||| |||||||| |||||||||||||| |||||||| ||
Sbjct 1774 GGTTGCTCGGTTTTCTTGTTGCCAGAAGATATCGTGGAGGTGAATCAAAAGATGATACTA 1833
Query 1851 ATCTTAACGGCAAGTATAATGTACTGGAGTCTTCA 1885
||| ||||||||||||||||||| ||||| |||||
Sbjct 1834 ATCCTAACGGCAAGTATAATGTATTGGAGCCTTCA 1868
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 104919139050
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5