BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg945397

Length=208
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G25720.1 | Symbols: ATQC, QC, QCT | glutaminyl cyclase | chr...   202    1e-51


> AT4G25720.1 | Symbols: ATQC, QC, QCT | glutaminyl cyclase | chr4:13099818-13102578 
REVERSE LENGTH=1182
Length=1182

 Score =  202 bits (109),  Expect = 1e-51
 Identities = 125/133 (94%), Gaps = 0/133 (0%)
 Strand=Plus/Plus

Query  1    AGGTTGAATTTCTTGAAAAAATGGGCAATATATATTTTGGAGAGGGTTTAACACTCCTTG  60
            |||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct  476  AGGTTGAAATTCTTGAAAAAATGGACAATACATATTTTGGAGAGGGTTTAACACTCCTTG  535

Query  61   GAGAAAGGCTCTGTCAAATAGCATGGTTGACGAACACGGGTTTCACATATGACCTTCGCA  120
            |||||||||||| |||| | ||||||||||| ||||||||||||||||||||||||||||
Sbjct  536  GAGAAAGGCTCTTTCAAGTCGCATGGTTGACAAACACGGGTTTCACATATGACCTTCGCA  595

Query  121  ACTTAAGCAAAGT  133
            ||||||| |||||
Sbjct  596  ACTTAAGTAAAGT  608



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 9305749935


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5