BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg945451 Length=641 Score E Sequences producing significant alignments: (Bits) Value AT4G26240.1 | Symbols: | unknown protein; Has 30201 Blast hits... 979 0.0 > AT4G26240.1 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:13286774-13288971 REVERSE LENGTH=909 Length=909 Score = 979 bits (530), Expect = 0.0 Identities = 601/636 (94%), Gaps = 2/636 (0%) Strand=Plus/Plus Query 1 TGCAATCTGAAGAAAAATCAAATGAAGAAGTTAGCGAGAAAATGGCGAAGAACTCGTCGC 60 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 55 TGCAATCTGAAGAAAAATCAAATGAAGAAGTTAGCGAGAAAATGGCGGAGAACTCGTCGT 114 Query 61 GATGAAGATGATGATAAGTTCGTCCTTCCTACTTCCGACGACGTCGATTCTCGGCCTATC 120 || |||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 115 GACGAAGATGATGATAAGTTCGTCCTTCCTACTTCTGAAGACGTCGATTCTCGGCCTATT 174 Query 121 GATACGCAAGAGCAAGAAGAGTACGTTAGGTCGCTTGAGGAAGCTCATGCTCAGCAAAGT 180 |||||||||||||| || ||||||||| ||| ||||||||||||||||||||||||||| Sbjct 175 GATACGCAAGAGCAGGAGGAGTACGTTCGGTATCTTGAGGAAGCTCATGCTCAGCAAAGT 234 Query 181 CGGCAATGGAGGAGTGTGTTCGTGGTTCTCCTGATCTGCTATGGAGCTTTTCTCTTCTAC 240 | ||||||||||| ||||| |||||||| |||||||||| ||||||||| ||||||||| Sbjct 235 CTTCAATGGAGGAGCGTGTTTGTGGTTCTTCTGATCTGCTTTGGAGCTTTCCTCTTCTAC 294 Query 241 TCTATTTTTCAGCAGTTCATGTCACCATGGGAACTGCGGTATCATGCCTACTTCATGGAA 300 || ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 295 TCCATTTTCCAGCAGTTCATGTCACCATGGGAACTGCGGTATCATGCCTACTTTATGGAA 354 Query 301 GATCTCAAGTCATGGATGGTCATTTCAGCTGAGTGGATCGCTATCATGACTTGCTGCCTC 360 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct 355 GATCTCAAGTCATGGATGGTCATTTCAGCTGAGTGGATCGCTATCATGGCTTGCTCCCTC 414 Query 361 TCCATTGTCGGGCTACGAGATAAGAAGAATGATCATAGACGATGGTTCTGGTACTCATGT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 415 TCCATTGTCGGGCTACGAGATAAGAAGAATGATCATAGACGATGGTTCTGGTACTCTTGT 474 Query 421 GTTGTTGGATCTGCATTGACCATCTTTTGGCTTTATTACTTACTGAGGCTTCCGAAATTC 480 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 475 GTTGTTGGATCTGCATTGACCATCTTTTGGCTTTATTACTTGCTGAGGCTTCCGAAATTC 534 Query 481 CGATGGGATGCTATCTGGCTTCCGTTTGGGCCGCTTTGTGGAGCTGGAATTTGTCTATAC 540 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 535 CGGTGGGATGCTATCTGGCTTCCGTTTGGGCCGCTTTGTGGAGCTGGAATTTGTCTATAC 594 Query 541 GTGGACCATCTACTAGAGGAATCATCTGAGGAAGTGAAAAAATTAAGGAACTATATGTAT 600 ||||||||||| |||||||| ||||||||||||||||||||| | ||||||||||||||| Sbjct 595 GTGGACCATCTTCTAGAGGAGTCATCTGAGGAAGTGAAAAAACTGAGGAACTATATGTAT 654 Query 601 GCATATAAAGCAAGGTAGAGA--TGATCGCTACTTT 634 |||||||||||| |||||||| | || |||||||| Sbjct 655 GCATATAAAGCACGGTAGAGAGATAATAGCTACTTT 690 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 30944234552 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5