BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg945467
Length=2764
Score E
Sequences producing significant alignments: (Bits) Value
AT4G26090.1 | Symbols: RPS2 | NB-ARC domain-containing disease ... 4180 0.0
AT4G26095.1 | Symbols: | other RNA | chr4:13224338-13227622 RE... 4065 0.0
> AT4G26090.1 | Symbols: RPS2 | NB-ARC domain-containing disease
resistance protein | chr4:13224338-13227872 FORWARD LENGTH=3535
Length=3535
Score = 4180 bits (2263), Expect = 0.0
Identities = 2606/2771 (94%), Gaps = 25/2771 (1%)
Strand=Plus/Plus
Query 1 AGAGCGAAAAATTCATCGAAATGGATTTCATCTCATCTCTAATCGTGGGCTTTGCTCAGG 60
||||||| ||| |||||||||||||||||||||||||||| ||||| |||| ||||||||
Sbjct 240 AGAGCGAGAAA-TCATCGAAATGGATTTCATCTCATCTCTTATCGTTGGCTGTGCTCAGG 298
Query 61 TGTTGTGTGAATCTATGAATATGGCGGACAGAAGAGGACACAACACTGATCTCAGACAAG 120
|||||||||||||||||||||||||||| ||||||||||| || |||||||| |||||||
Sbjct 299 TGTTGTGTGAATCTATGAATATGGCGGAGAGAAGAGGACATAAGACTGATCTTAGACAAG 358
Query 121 CCATCACTGATCTCGAAACAGCCATCGGTGACTTGAAGGCCATACGTGATGACCTGAATT 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 359 CCATCACTGATCTTGAAACAGCCATCGGTGACTTGAAGGCCATACGTGATGACCTGACTT 418
Query 181 TACGGATCCAACAAGACGATCTAGAGGGACGAAGCTGCTCCAATCGTGCCAGAGAGTGGC 240
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 419 TACGGATCCAACAAGACGGTCTAGAGGGACGAAGCTGCTCAAATCGTGCCAGAGAGTGGC 478
Query 241 TTAGCGCGGTGCAAGCAACAGAGACTAAAGCAG-CCTCCATTTTAGTGAGGTTTAGGCGT 299
|||| |||||||||| ||| ||||||||| ||| ||| | ||||||||||||||||||||
Sbjct 479 TTAGTGCGGTGCAAGTAACGGAGACTAAAACAGCCCTAC-TTTTAGTGAGGTTTAGGCGT 537
Query 300 CGGGAACAGAGGAC-CAGAATGCGGAGGAGATGCCTCGGTTGTTTCGGCTGTGCCGACTA 358
|||||||||||||| | ||||| ||||||||| |||| |||||||||| |||||||||||
Sbjct 538 CGGGAACAGAGGACGC-GAATGAGGAGGAGATACCTCAGTTGTTTCGGTTGTGCCGACTA 596
Query 359 CAAACTGTGCAATAAGGTTTGTGCGACATTGAAGAGCATTGATGAGCTGAGAGAACGCTC 418
|||||||||||| ||||||| ||| | |||||||||||||| ||||||||||||||||||
Sbjct 597 CAAACTGTGCAAGAAGGTTTCTGCCATATTGAAGAGCATTGGTGAGCTGAGAGAACGCTC 656
Query 419 TGAAGATATTAAAACAGATGGCGGGTCAATTCAACAAACATGTAGGGAGATACCCATCAA 478
||||| ||| |||||||||||||||||||||||| ||| ||||| ||||||||||||||
Sbjct 657 TGAAGCTATCAAAACAGATGGCGGGTCAATTCAAGTAACTTGTAGAGAGATACCCATCAA 716
Query 479 GTCCGTGGTCGGAAATACCACGATGATGGAACGGGTTATGGAATTTCTTAGTGAAGAAGA 538
|||||| ||||||||||||||||||||||||| |||| |||||||||| |||||||||||
Sbjct 717 GTCCGTTGTCGGAAATACCACGATGATGGAACAGGTTTTGGAATTTCTCAGTGAAGAAGA 776
Query 539 AGAAAGAGGAATCATCGGGGTTTACGGACCTGGTGGGGTTGGGAAGACAACGTTAATGCA 598
||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct 777 AGAAAGAGGAATCATTGGTGTTTATGGACCTGGTGGGGTTGGGAAGACAACGTTAATGCA 836
Query 599 GAGTATTAACAACGAGCTGATCACAAAAGGACATCAGTATGATGTACTGATTTGGGTTCA 658
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 837 GAGCATTAACAACGAGCTGATCACAAAAGGACATCAGTATGATGTACTGATTTGGGTTCA 896
Query 659 AATGTCCCGAGAATTCGGCGAGTGTACAATTCAGCAAGCTGTTGGAGCGCGGTTGGGTTT 718
||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 897 AATGTCCAGAGAATTCGGCGAGTGTACAATTCAGCAAGCCGTTGGAGCACGGTTGGGTTT 956
Query 719 ATCTTGGGACGAGAAGGAGACCGGTGAAAACAGAGCTTTGAAGATATACAGAGCTTTGAG 778
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 957 ATCTTGGGACGAGAAGGAGACCGGCGAAAACAGAGCTTTGAAGATATACAGAGCTTTGAG 1016
Query 779 TCAGAAACGTTTCTTGTTGTTGCTAGATGATGTCTGGGAAGAGATAGACTTGGAGAAAAC 838
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1017 ACAGAAACGTTTCTTGTTGTTGCTAGATGATGTCTGGGAAGAGATAGACTTGGAGAAAAC 1076
Query 839 TGGAGTTCCTCGACCTGACAGGGAAAACAAATGCAAGATGATGTTCACGACACGGTCTAT 898
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1077 TGGAGTTCCTCGACCTGACAGGGAAAACAAATGCAAGGTGATGTTCACGACACGGTCTAT 1136
Query 899 GGCATTATGCAGCAATATGGGTGCGGAATACAAGTTGAGAGTGGAGTTTCTGGAGAAGAA 958
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1137 AGCATTATGCAACAATATGGGTGCGGAATACAAGTTGAGAGTGGAGTTTCTGGAGAAGAA 1196
Query 959 ATACGCGTGGGAGCTGTTCTGTAGTAAGGTAGGGAGAAAAGATCTCTTGGAGTCATCATC 1018
| ||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||
Sbjct 1197 ACACGCGTGGGAGCTGTTCTGTAGTAAGGTATGGAGAAAAGATCTTTTAGAGTCATCATC 1256
Query 1019 AATTCGCCGGCTCGCTGAGATTATAGTGAGTAAATGTGGAGGATTGCCGCTAGCGTTGAT 1078
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1257 AATTCGCCGGCTCGCGGAGATTATAGTGAGTAAATGTGGAGGATTGCCACTAGCGTTGAT 1316
Query 1079 CACTTTAGGAGGAGCCATGGCTCACAGAGAGACCGAAGAAGAGTGGATCCACGCTAGTGA 1138
|||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||
Sbjct 1317 CACTTTAGGAGGAGCCATGGCTCATAGAGAGACAGAAGAAGAGTGGATCCATGCTAGTGA 1376
Query 1139 AGTTCTGACTAGATTTCCAGCAGAGATGAAGGGTATGAACTATGTATTTGCCCTTTTAAA 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1377 AGTTCTGACTAGATTTCCAGCAGAGATGAAGGGTATGAACTATGTATTTGCCCTTTTGAA 1436
Query 1199 ATTCAGCTACGACAATCTCGATAGTGATCTGCTCCGGTCTTGTTTCTTGTACTGCGCTTT 1258
||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1437 ATTCAGCTACGACAACCTCGAGAGTGATCTGCTTCGGTCTTGTTTCTTGTACTGCGCTTT 1496
Query 1259 ATTCCCGGAAGAACATTCTATAGAGATAGAACAGCTTGTTGAGTACTGGGTGGGCGAAGG 1318
|||||| |||||||||||||||||||| || |||||||||||||||||||| ||||||||
Sbjct 1497 ATTCCCAGAAGAACATTCTATAGAGATCGAGCAGCTTGTTGAGTACTGGGTCGGCGAAGG 1556
Query 1319 GTTTCTCACCAGCTCCCATGGCGTTAACACCATTTACAAGGGATATTTTCTGATTGGGGA 1378
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1557 GTTTCTCACCAGCTCCCATGGCGTTAACACCATTTACAAGGGATATTTTCTCATTGGGGA 1616
Query 1379 TCTGAAAGCTGCATGTTTATTGGAAACCGGAGATGAGAAAACACAGGTGAAGATGCATAA 1438
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1617 TCTGAAAGCGGCATGTTTGTTGGAAACCGGAGATGAGAAAACACAGGTGAAGATGCATAA 1676
Query 1439 TGTGGTAAGAAGCTTTGCACTGTGGATAGCATCTGAACAGGGGACTTACAAGGAGCTGAT 1498
|||||| |||||||||||| ||||||| |||||||||||||||||||| |||||||||||
Sbjct 1677 TGTGGTCAGAAGCTTTGCATTGTGGATGGCATCTGAACAGGGGACTTATAAGGAGCTGAT 1736
Query 1499 CCTAGTTGAGCCTAACATGGGACATACTGAAGCTCCTAAAGCAGAAAACTGGCGACAAGC 1558
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1737 CCTAGTTGAGCCTAGCATGGGACATACTGAAGCTCCTAAAGCAGAAAACTGGCGACAAGC 1796
Query 1559 GTTGGTGATTTCATTGATAGATAACAGAATCCAGACCTTGCCTGAAAAACCCATATGCCC 1618
||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1797 GTTGGTGATCTCATTGTTAGATAACAGAATCCAGACCTTGCCTGAAAAACTCATATGCCC 1856
Query 1619 GAAACTGACAACACTGATGCTCCAACGGAACAGCTCTTTGAAGAAGATTTCAACAGGGTT 1678
|||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 1857 GAAACTGACAACACTGATGCTCCAACAGAACAGCTCTTTGAAGAAGATTCCAACAGGGTT 1916
Query 1679 TTTCATGCATATGCCTACTCTCAGGGTCTTGGACTTGTCTTTCACAAGTATCACTGAGAT 1738
|||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||
Sbjct 1917 TTTCATGCATATGCCTGTTCTCAGAGTCTTGGACTTGTCGTTCACAAGTATCACTGAGAT 1976
Query 1739 TCCGTTGTCTATTAAGTATTTGGTGGAGTTGTATCATCTGTCTATGTCAGGAACAAAGAT 1798
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1977 TCCGTTGTCTATCAAGTATTTGGTGGAGTTGTATCATCTGTCTATGTCAGGAACAAAGAT 2036
Query 1799 AAGTGTATTGCCCCGGGAGCTTGGTAATCTTAGAAAGCTGAAGCATCTGGACCTACAAAG 1858
|||||||||||| | ||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 2037 AAGTGTATTGCCACAGGAGCTTGGGAATCTTAGAAAACTGAAGCATCTGGACCTACAAAG 2096
Query 1859 AACTCAGTTTCTTCAGACGATCCCTCGAGATGCCATATGTTGGCTGAGCAAGCTCGAGGT 1918
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2097 AACTCAGTTTCTTCAGACGATCCCACGAGATGCCATATGTTGGCTGAGCAAGCTCGAGGT 2156
Query 1919 TCTGAACTTGTACTACAGTTATGCGGGTTGGGAACTGCAGAGCTTTGGAGAAGATGAAGT 1978
||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 2157 TCTGAACTTGTACTACAGTTACGCCGGTTGGGAACTGCAGAGCTTTGGAGAAGATGAAGC 2216
Query 1979 AGAAGAACTCGGTTTTGATGACTTGGAATACTTGGAAAACCTAACCACACTTGGTATCAC 2038
|||||||||||| || | ||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2217 AGAAGAACTCGGATTCGCTGACTTGGAATACTTGGAAAACCTAACCACACTCGGTATCAC 2276
Query 2039 TGTTCTCTCGTTGGAGACCCTAAAAACTCTCTACGAGTTTGGGGCCTTGCATAAACATAT 2098
||||||||| |||||||||||||||||||||| |||||| || || ||||||||||||||
Sbjct 2277 TGTTCTCTCATTGGAGACCCTAAAAACTCTCTTCGAGTTCGGTGCTTTGCATAAACATAT 2336
Query 2099 ACAGCACCTCCACATTGAAGAGTGCAATGGTCTCCTCAACTTCAATCTCCCATCACTCAC 2158
|||||| |||||| ||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 2337 ACAGCATCTCCACGTTGAAGAGTGCAATGAACTCCTCTACTTCAATCTCCCATCACTCAC 2396
Query 2159 TAACCATGGCAGGAACCTGAGAAGACTTAGCATTAAAAGTTGCCATGAGTTGGAGTACCT 2218
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2397 TAACCATGGCAGGAACCTGAGAAGACTTAGCATTAAAAGTTGCCATGACTTGGAGTACCT 2456
Query 2219 GGTCACACCAATAGATGTTGTTGAAAATGATTGGCTTCCAAGACTAGAGGTTCTGACGTT 2278
||||||||| |||| || | ||||||||||||||||| || |||||||||||||||||
Sbjct 2457 GGTCACACCCGCAGAT-TT-T-GAAAATGATTGGCTTCCGAGTCTAGAGGTTCTGACGTT 2513
Query 2279 ACACAGCCTTCATAAATTAAGCAGAGTGTGGAGAAATCCTGTAAGCGAAGAAGAGTGTCT 2338
|||||||||||| || |||| |||||||||| ||||| |||||||| |||| |||||
Sbjct 2514 ACACAGCCTTCACAACTTAACCAGAGTGTGGGGAAATTCTGTAAGCCAAGAT---TGTCT 2570
Query 2339 GCGGAATATCCGTTGCATAAATATTTCACACTGCAACAAGCTGAAGAATGTGTCATGGGT 2398
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 2571 GCGGAATATCCGTTGCATAAACATTTCACACTGCAACAAGCTGAAGAATGTCTCATGGGT 2630
Query 2399 TCCGAAACTCCCAAAGCTAGAGGTGATTGA-CTTGTTCGACTGCAGAGAGCTAGAGGAAT 2457
|| ||||||||||||||||||||||||||| || |||||||||||||||| |||||||||
Sbjct 2631 TCAGAAACTCCCAAAGCTAGAGGTGATTGAACT-GTTCGACTGCAGAGAGATAGAGGAAT 2689
Query 2458 TGATAAGTGAACACGAGAGTCCATCCGTTGAAGATCCAACATTGTTCCCAAGCCTGAAGA 2517
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2690 TGATAAGCGAACACGAGAGTCCATCCGTCGAAGATCCAACATTGTTCCCAAGCCTGAAGA 2749
Query 2518 CCTTGACAGCAAGGGATCTCCCAGAACTAAAGAGCATCCTCCCATCTCGATTTTCTTTCC 2577
|||||| | | |||||||| ||||||||||| ||||||||||||||||||||||| ||||
Sbjct 2750 CCTTGAGAACTAGGGATCTGCCAGAACTAAACAGCATCCTCCCATCTCGATTTTCATTCC 2809
Query 2578 AAAAAGTTGAAACTTTAGTCATCACTAATTGCCCCAAAGTTAAGAAACTGCCATTTCAGG 2637
||||||||||||| ||||||||||| |||||||||| ||||||||||||||| |||||||
Sbjct 2810 AAAAAGTTGAAACATTAGTCATCACAAATTGCCCCAGAGTTAAGAAACTGCCGTTTCAGG 2869
Query 2638 AGACGA--AC--A--TG--C---C-AAGAGTTTATTGTGAGGAGAAATGGTGGAATGCAC 2685
||| || || | || | | || ||||||||||||||||||||||||||| ||||
Sbjct 2870 AGAGGAGGACCCAGATGAACTTGCCAACAGTTTATTGTGAGGAGAAATGGTGGAAAGCAC 2929
Query 2686 TGGAAAAAGATGAACCAAACAAAGAGCTTTGTTATTTACCGCGCTTTGTTCCAAATTGAT 2745
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2930 TGGAAAAAGATCAACCAAACGAAGAGCTTTGTTATTTACCGCGCTTTGTTCCAAATTGAT 2989
Query 2746 ATGAGAGCTAA 2756
|| ||||||||
Sbjct 2990 ATAAGAGCTAA 3000
> AT4G26095.1 | Symbols: | other RNA | chr4:13224338-13227622
REVERSE LENGTH=3045
Length=3045
Score = 4065 bits (2201), Expect = 0.0
Identities = 2538/2700 (94%), Gaps = 25/2700 (1%)
Strand=Plus/Minus
Query 1 AGAGCGAAAAATTCATCGAAATGGATTTCATCTCATCTCTAATCGTGGGCTTTGCTCAGG 60
||||||| ||| |||||||||||||||||||||||||||| ||||| |||| ||||||||
Sbjct 2806 AGAGCGAGAAA-TCATCGAAATGGATTTCATCTCATCTCTTATCGTTGGCTGTGCTCAGG 2748
Query 61 TGTTGTGTGAATCTATGAATATGGCGGACAGAAGAGGACACAACACTGATCTCAGACAAG 120
|||||||||||||||||||||||||||| ||||||||||| || |||||||| |||||||
Sbjct 2747 TGTTGTGTGAATCTATGAATATGGCGGAGAGAAGAGGACATAAGACTGATCTTAGACAAG 2688
Query 121 CCATCACTGATCTCGAAACAGCCATCGGTGACTTGAAGGCCATACGTGATGACCTGAATT 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2687 CCATCACTGATCTTGAAACAGCCATCGGTGACTTGAAGGCCATACGTGATGACCTGACTT 2628
Query 181 TACGGATCCAACAAGACGATCTAGAGGGACGAAGCTGCTCCAATCGTGCCAGAGAGTGGC 240
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 2627 TACGGATCCAACAAGACGGTCTAGAGGGACGAAGCTGCTCAAATCGTGCCAGAGAGTGGC 2568
Query 241 TTAGCGCGGTGCAAGCAACAGAGACTAAAGCAG-CCTCCATTTTAGTGAGGTTTAGGCGT 299
|||| |||||||||| ||| ||||||||| ||| ||| | ||||||||||||||||||||
Sbjct 2567 TTAGTGCGGTGCAAGTAACGGAGACTAAAACAGCCCTAC-TTTTAGTGAGGTTTAGGCGT 2509
Query 300 CGGGAACAGAGGAC-CAGAATGCGGAGGAGATGCCTCGGTTGTTTCGGCTGTGCCGACTA 358
|||||||||||||| | ||||| ||||||||| |||| |||||||||| |||||||||||
Sbjct 2508 CGGGAACAGAGGACGC-GAATGAGGAGGAGATACCTCAGTTGTTTCGGTTGTGCCGACTA 2450
Query 359 CAAACTGTGCAATAAGGTTTGTGCGACATTGAAGAGCATTGATGAGCTGAGAGAACGCTC 418
|||||||||||| ||||||| ||| | |||||||||||||| ||||||||||||||||||
Sbjct 2449 CAAACTGTGCAAGAAGGTTTCTGCCATATTGAAGAGCATTGGTGAGCTGAGAGAACGCTC 2390
Query 419 TGAAGATATTAAAACAGATGGCGGGTCAATTCAACAAACATGTAGGGAGATACCCATCAA 478
||||| ||| |||||||||||||||||||||||| ||| ||||| ||||||||||||||
Sbjct 2389 TGAAGCTATCAAAACAGATGGCGGGTCAATTCAAGTAACTTGTAGAGAGATACCCATCAA 2330
Query 479 GTCCGTGGTCGGAAATACCACGATGATGGAACGGGTTATGGAATTTCTTAGTGAAGAAGA 538
|||||| ||||||||||||||||||||||||| |||| |||||||||| |||||||||||
Sbjct 2329 GTCCGTTGTCGGAAATACCACGATGATGGAACAGGTTTTGGAATTTCTCAGTGAAGAAGA 2270
Query 539 AGAAAGAGGAATCATCGGGGTTTACGGACCTGGTGGGGTTGGGAAGACAACGTTAATGCA 598
||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct 2269 AGAAAGAGGAATCATTGGTGTTTATGGACCTGGTGGGGTTGGGAAGACAACGTTAATGCA 2210
Query 599 GAGTATTAACAACGAGCTGATCACAAAAGGACATCAGTATGATGTACTGATTTGGGTTCA 658
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2209 GAGCATTAACAACGAGCTGATCACAAAAGGACATCAGTATGATGTACTGATTTGGGTTCA 2150
Query 659 AATGTCCCGAGAATTCGGCGAGTGTACAATTCAGCAAGCTGTTGGAGCGCGGTTGGGTTT 718
||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 2149 AATGTCCAGAGAATTCGGCGAGTGTACAATTCAGCAAGCCGTTGGAGCACGGTTGGGTTT 2090
Query 719 ATCTTGGGACGAGAAGGAGACCGGTGAAAACAGAGCTTTGAAGATATACAGAGCTTTGAG 778
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2089 ATCTTGGGACGAGAAGGAGACCGGCGAAAACAGAGCTTTGAAGATATACAGAGCTTTGAG 2030
Query 779 TCAGAAACGTTTCTTGTTGTTGCTAGATGATGTCTGGGAAGAGATAGACTTGGAGAAAAC 838
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2029 ACAGAAACGTTTCTTGTTGTTGCTAGATGATGTCTGGGAAGAGATAGACTTGGAGAAAAC 1970
Query 839 TGGAGTTCCTCGACCTGACAGGGAAAACAAATGCAAGATGATGTTCACGACACGGTCTAT 898
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1969 TGGAGTTCCTCGACCTGACAGGGAAAACAAATGCAAGGTGATGTTCACGACACGGTCTAT 1910
Query 899 GGCATTATGCAGCAATATGGGTGCGGAATACAAGTTGAGAGTGGAGTTTCTGGAGAAGAA 958
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1909 AGCATTATGCAACAATATGGGTGCGGAATACAAGTTGAGAGTGGAGTTTCTGGAGAAGAA 1850
Query 959 ATACGCGTGGGAGCTGTTCTGTAGTAAGGTAGGGAGAAAAGATCTCTTGGAGTCATCATC 1018
| ||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||
Sbjct 1849 ACACGCGTGGGAGCTGTTCTGTAGTAAGGTATGGAGAAAAGATCTTTTAGAGTCATCATC 1790
Query 1019 AATTCGCCGGCTCGCTGAGATTATAGTGAGTAAATGTGGAGGATTGCCGCTAGCGTTGAT 1078
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1789 AATTCGCCGGCTCGCGGAGATTATAGTGAGTAAATGTGGAGGATTGCCACTAGCGTTGAT 1730
Query 1079 CACTTTAGGAGGAGCCATGGCTCACAGAGAGACCGAAGAAGAGTGGATCCACGCTAGTGA 1138
|||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||
Sbjct 1729 CACTTTAGGAGGAGCCATGGCTCATAGAGAGACAGAAGAAGAGTGGATCCATGCTAGTGA 1670
Query 1139 AGTTCTGACTAGATTTCCAGCAGAGATGAAGGGTATGAACTATGTATTTGCCCTTTTAAA 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1669 AGTTCTGACTAGATTTCCAGCAGAGATGAAGGGTATGAACTATGTATTTGCCCTTTTGAA 1610
Query 1199 ATTCAGCTACGACAATCTCGATAGTGATCTGCTCCGGTCTTGTTTCTTGTACTGCGCTTT 1258
||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1609 ATTCAGCTACGACAACCTCGAGAGTGATCTGCTTCGGTCTTGTTTCTTGTACTGCGCTTT 1550
Query 1259 ATTCCCGGAAGAACATTCTATAGAGATAGAACAGCTTGTTGAGTACTGGGTGGGCGAAGG 1318
|||||| |||||||||||||||||||| || |||||||||||||||||||| ||||||||
Sbjct 1549 ATTCCCAGAAGAACATTCTATAGAGATCGAGCAGCTTGTTGAGTACTGGGTCGGCGAAGG 1490
Query 1319 GTTTCTCACCAGCTCCCATGGCGTTAACACCATTTACAAGGGATATTTTCTGATTGGGGA 1378
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1489 GTTTCTCACCAGCTCCCATGGCGTTAACACCATTTACAAGGGATATTTTCTCATTGGGGA 1430
Query 1379 TCTGAAAGCTGCATGTTTATTGGAAACCGGAGATGAGAAAACACAGGTGAAGATGCATAA 1438
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1429 TCTGAAAGCGGCATGTTTGTTGGAAACCGGAGATGAGAAAACACAGGTGAAGATGCATAA 1370
Query 1439 TGTGGTAAGAAGCTTTGCACTGTGGATAGCATCTGAACAGGGGACTTACAAGGAGCTGAT 1498
|||||| |||||||||||| ||||||| |||||||||||||||||||| |||||||||||
Sbjct 1369 TGTGGTCAGAAGCTTTGCATTGTGGATGGCATCTGAACAGGGGACTTATAAGGAGCTGAT 1310
Query 1499 CCTAGTTGAGCCTAACATGGGACATACTGAAGCTCCTAAAGCAGAAAACTGGCGACAAGC 1558
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1309 CCTAGTTGAGCCTAGCATGGGACATACTGAAGCTCCTAAAGCAGAAAACTGGCGACAAGC 1250
Query 1559 GTTGGTGATTTCATTGATAGATAACAGAATCCAGACCTTGCCTGAAAAACCCATATGCCC 1618
||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1249 GTTGGTGATCTCATTGTTAGATAACAGAATCCAGACCTTGCCTGAAAAACTCATATGCCC 1190
Query 1619 GAAACTGACAACACTGATGCTCCAACGGAACAGCTCTTTGAAGAAGATTTCAACAGGGTT 1678
|||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 1189 GAAACTGACAACACTGATGCTCCAACAGAACAGCTCTTTGAAGAAGATTCCAACAGGGTT 1130
Query 1679 TTTCATGCATATGCCTACTCTCAGGGTCTTGGACTTGTCTTTCACAAGTATCACTGAGAT 1738
|||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||
Sbjct 1129 TTTCATGCATATGCCTGTTCTCAGAGTCTTGGACTTGTCGTTCACAAGTATCACTGAGAT 1070
Query 1739 TCCGTTGTCTATTAAGTATTTGGTGGAGTTGTATCATCTGTCTATGTCAGGAACAAAGAT 1798
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1069 TCCGTTGTCTATCAAGTATTTGGTGGAGTTGTATCATCTGTCTATGTCAGGAACAAAGAT 1010
Query 1799 AAGTGTATTGCCCCGGGAGCTTGGTAATCTTAGAAAGCTGAAGCATCTGGACCTACAAAG 1858
|||||||||||| | ||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1009 AAGTGTATTGCCACAGGAGCTTGGGAATCTTAGAAAACTGAAGCATCTGGACCTACAAAG 950
Query 1859 AACTCAGTTTCTTCAGACGATCCCTCGAGATGCCATATGTTGGCTGAGCAAGCTCGAGGT 1918
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 949 AACTCAGTTTCTTCAGACGATCCCACGAGATGCCATATGTTGGCTGAGCAAGCTCGAGGT 890
Query 1919 TCTGAACTTGTACTACAGTTATGCGGGTTGGGAACTGCAGAGCTTTGGAGAAGATGAAGT 1978
||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 889 TCTGAACTTGTACTACAGTTACGCCGGTTGGGAACTGCAGAGCTTTGGAGAAGATGAAGC 830
Query 1979 AGAAGAACTCGGTTTTGATGACTTGGAATACTTGGAAAACCTAACCACACTTGGTATCAC 2038
|||||||||||| || | ||||||||||||||||||||||||||||||||| ||||||||
Sbjct 829 AGAAGAACTCGGATTCGCTGACTTGGAATACTTGGAAAACCTAACCACACTCGGTATCAC 770
Query 2039 TGTTCTCTCGTTGGAGACCCTAAAAACTCTCTACGAGTTTGGGGCCTTGCATAAACATAT 2098
||||||||| |||||||||||||||||||||| |||||| || || ||||||||||||||
Sbjct 769 TGTTCTCTCATTGGAGACCCTAAAAACTCTCTTCGAGTTCGGTGCTTTGCATAAACATAT 710
Query 2099 ACAGCACCTCCACATTGAAGAGTGCAATGGTCTCCTCAACTTCAATCTCCCATCACTCAC 2158
|||||| |||||| ||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 709 ACAGCATCTCCACGTTGAAGAGTGCAATGAACTCCTCTACTTCAATCTCCCATCACTCAC 650
Query 2159 TAACCATGGCAGGAACCTGAGAAGACTTAGCATTAAAAGTTGCCATGAGTTGGAGTACCT 2218
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 649 TAACCATGGCAGGAACCTGAGAAGACTTAGCATTAAAAGTTGCCATGACTTGGAGTACCT 590
Query 2219 GGTCACACCAATAGATGTTGTTGAAAATGATTGGCTTCCAAGACTAGAGGTTCTGACGTT 2278
||||||||| |||| || | ||||||||||||||||| || |||||||||||||||||
Sbjct 589 GGTCACACCCGCAGAT-TT-T-GAAAATGATTGGCTTCCGAGTCTAGAGGTTCTGACGTT 533
Query 2279 ACACAGCCTTCATAAATTAAGCAGAGTGTGGAGAAATCCTGTAAGCGAAGAAGAGTGTCT 2338
|||||||||||| || |||| |||||||||| ||||| |||||||| |||| |||||
Sbjct 532 ACACAGCCTTCACAACTTAACCAGAGTGTGGGGAAATTCTGTAAGCCAAGAT---TGTCT 476
Query 2339 GCGGAATATCCGTTGCATAAATATTTCACACTGCAACAAGCTGAAGAATGTGTCATGGGT 2398
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 475 GCGGAATATCCGTTGCATAAACATTTCACACTGCAACAAGCTGAAGAATGTCTCATGGGT 416
Query 2399 TCCGAAACTCCCAAAGCTAGAGGTGATTGA-CTTGTTCGACTGCAGAGAGCTAGAGGAAT 2457
|| ||||||||||||||||||||||||||| || |||||||||||||||| |||||||||
Sbjct 415 TCAGAAACTCCCAAAGCTAGAGGTGATTGAACT-GTTCGACTGCAGAGAGATAGAGGAAT 357
Query 2458 TGATAAGTGAACACGAGAGTCCATCCGTTGAAGATCCAACATTGTTCCCAAGCCTGAAGA 2517
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 356 TGATAAGCGAACACGAGAGTCCATCCGTCGAAGATCCAACATTGTTCCCAAGCCTGAAGA 297
Query 2518 CCTTGACAGCAAGGGATCTCCCAGAACTAAAGAGCATCCTCCCATCTCGATTTTCTTTCC 2577
|||||| | | |||||||| ||||||||||| ||||||||||||||||||||||| ||||
Sbjct 296 CCTTGAGAACTAGGGATCTGCCAGAACTAAACAGCATCCTCCCATCTCGATTTTCATTCC 237
Query 2578 AAAAAGTTGAAACTTTAGTCATCACTAATTGCCCCAAAGTTAAGAAACTGCCATTTCAGG 2637
||||||||||||| ||||||||||| |||||||||| ||||||||||||||| |||||||
Sbjct 236 AAAAAGTTGAAACATTAGTCATCACAAATTGCCCCAGAGTTAAGAAACTGCCGTTTCAGG 177
Query 2638 AGACGA--AC--A--TG--C---C-AAGAGTTTATTGTGAGGAGAAATGGTGGAATGCAC 2685
||| || || | || | | || ||||||||||||||||||||||||||| ||||
Sbjct 176 AGAGGAGGACCCAGATGAACTTGCCAACAGTTTATTGTGAGGAGAAATGGTGGAAAGCAC 117
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 137306922991
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5