BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg945476
Length=979
Score E
Sequences producing significant alignments: (Bits) Value
AT4G26010.1 | Symbols: | Peroxidase superfamily protein | chr4... 1290 0.0
AT1G34510.1 | Symbols: | Peroxidase superfamily protein | chr1... 514 6e-145
AT1G34330.1 | Symbols: | pseudogene, putative peroxidase, simi... 385 5e-106
> AT4G26010.1 | Symbols: | Peroxidase superfamily protein | chr4:13200593-13201941
FORWARD LENGTH=1246
Length=1246
Score = 1290 bits (698), Expect = 0.0
Identities = 881/967 (91%), Gaps = 21/967 (2%)
Strand=Plus/Plus
Query 10 CATCATACGAAATGAGGGCAATCACAGCTTTGTTTTTCCTTTTCTGTTTCGTTGCTCCCT 69
||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |
Sbjct 50 CATCATACGAAATGAGGTCAATCACAGCTTTGTTTTTCCTTTTCTGTTTCCTTGCTCCTT 109
Query 70 CTGCTTTGGCGCAGCTCCG-ACAAGGGTTCTACGGCCGCTCATGCCCTCGAGCTGAATCT 128
||||||||||||||||||| || ||||||||| ||||||||||||| || || ||||||
Sbjct 110 CTGCTTTGGCGCAGCTCCGAAC-TGGGTTCTACAGCCGCTCATGCCCCCGTGCCGAATCT 168
Query 129 ATCGTTGCTAATGTTGTTGCCAGCCGTTTCCGCCGTGAC-CGTTCCATCACTGCTGCATT 187
||||| |||| ||||||||||| ||||||| | ||||| | ||||| ||||| |||||
Sbjct 169 ATCGTGGCTAGTGTTGTTGCCAACCGTTTCAGAAGTGACAAG-TCCATTACTGCAGCATT 227
Query 188 TCTTCGTATGCAGTTTCATGATTGCTTTGTCAGGGGTTGTGATGCTTCCCTCTTGATCGA 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 228 TCTTCGTATGCAGTTTCATGATTGCTTTGTCAGGGGTTGTGATGCTTCCCTCTTGATCGA 287
Query 248 CCCAAGACCTGGAAGGCCATCAGAGAAAAGCACTGGACCAAACGCAAGCGTGAGAGGCTA 307
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 288 CCCAAGACCTGGAAGGCCATCAGAGAAAAGCACTGGACCAAATGCAAGCGTGAGAGGCTA 347
Query 308 CGAGGTCATTGATGAGGCTAAGAGACAACTAGAGGCTGCATGTCCCCGAACTGTCTCATG 367
|||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 348 CGAGATCATTGATGAGGCTAAGAGACAGCTCGAGGCTGCATGTCCCCGAACTGTCTCATG 407
Query 368 CGCAGACATTGTAACTCTAGCCACAAGAGACTCGGTCGCATTAGCCGGCGGTCCAAGATA 427
|||||||||||||||||| |||||||||||||||||||||||||| || |||||||| |
Sbjct 408 CGCAGACATTGTAACTCTTGCCACAAGAGACTCGGTCGCATTAGCTGGTGGTCCAAGGTT 467
Query 428 CTCAGTACCAACAGGTAGACGTGATGGATTAAGGTCAAACCCTGGTGATGTGAACTTACC 487
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 468 CTCAGTACCAACAGGAAGACGTGATGGATTAAGGTCAAACCCCAATGATGTGAACTTACC 527
Query 488 CGGACCAACAATTCCGGTTAGCGCATCTATCCAATTGTTTGCAGCTCAAGGTATGAATAC 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 528 CGGACCAACAATTCCGGTTAGCGCATCTATCCAATTGTTTGCAGCTCAAGGTATGAATAC 587
Query 548 CAACGATATGGTTACACTTATTGGTGGTGGACACAGCGTTGGTGTTGCACATTGCAGTCT 607
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 588 CAACGATATGGTTACACTTATTGGTGGTGGCCACAGCGTCGGTGTTGCACATTGCAGTCT 647
Query 608 CTTC-AGGGACAGGCTTGCCGACCCAGCAATGGA-CAGGTCATTGAA-TGCTAGGTTGAG 664
|||| ||| |||||||| |||||| |||||||| | |||||||| | |||| |||||
Sbjct 648 CTTCCAGG-ACAGGCTTTCCGACCGTGCAATGGAACCC-TCATTGAAGT-CTAGCTTGAG 704
Query 665 GAACACATGTC-GTGCCCCAAATGACCCGACAGTC-TTTTTGGACCAAAGGACTCCATTT 722
|| | ||| | || |||| || ||||| ||| | ||||||||||||| |||| |||||
Sbjct 705 GAGGAAATG-CAGTTCCCCTAACGACCCAACAA-CGTTTTTGGACCAAAAGACTTCATTT 762
Query 723 ACTGTGGATAACGCAATCTATGGAGAGATCCGACGTCAAAGAGGAATTCTAAGAATTGAT 782
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 763 ACTGTGGATAACGCAATCTATGGAGAGATCCGAAGACAAAGAGGAATTCTAAGAATTGAT 822
Query 783 CAAAACTTGGGTCTCTC-TGGATCAACCCGTGGGATTGTGTC-GAGTTTTGCATCAAGCA 840
|||||||||||||| | | |||||||| ||||||||||||| | ||| |||||||||||
Sbjct 823 CAAAACTTGGGTCT-TGATAGATCAACCAGTGGGATTGTGTCTG-GTTATGCATCAAGCA 880
Query 841 ATACACTCTTCAGACAGAGATTTGCCCAAGCAATGGTGAAAATGGGCACCATTAGGGTTC 900
|||||||||||||| ||||||||||| ||||| ||||||||||||| ||||||| |||||
Sbjct 881 ATACACTCTTCAGAAAGAGATTTGCCGAAGCATTGGTGAAAATGGGTACCATTAAGGTTC 940
Query 901 TCACTGGACGGTCCGGAGAGATCAGGAGAAACTGCAGACTGTTCAACAAC-G-G-ACGTT 957
| || ||||| || |||||||||||||||||||||||| | ||||||||| | | |||||
Sbjct 941 TTACCGGACGTTCTGGAGAGATCAGGAGAAACTGCAGAGTCTTCAACAACTGAGGACGTT 1000
Query 958 GATTCTT 964
|||||||
Sbjct 1001 GATTCTT 1007
> AT1G34510.1 | Symbols: | Peroxidase superfamily protein | chr1:12615733-12617032
REVERSE LENGTH=1208
Length=1208
Score = 514 bits (278), Expect = 6e-145
Identities = 742/960 (77%), Gaps = 56/960 (6%)
Strand=Plus/Plus
Query 19 AAATGAGGGCAATCACAGCTTTGTTTTTCCTTTTCTGTTTCGTTGCTCCCTCTGCTTTGG 78
|||||||||||||| |||||| ||||||| ||||||||| | ||| |||||||| ||| |
Sbjct 79 AAATGAGGGCAATCGCAGCTTGGTTTTTCATTTTCTGTTACCTTGTTCCCTCTGTTTTTG 138
Query 79 CGCAGCTCCGACAAGGGTTCTACGGCCGCT-CATGCCCTCGAGCTGAATCTATCGTTGCT 137
|||||||||| || ||||| ||| | | | ||||||||| |||||||||||||| | |
Sbjct 139 CGCAGCTCCGGCATGGGTTTTAC-GAGGGTACATGCCCTCCCGCTGAATCTATCGTGGGT 197
Query 138 A-ATGTTGTTGCCAGCCGTTTCCG-CCGTGACCGTTCCATCACTGCTGCATTTCTTCGTA 195
| | |||||| || || || | |||| |||| | | ||||| ||||| |||||||
Sbjct 198 AGA-GTTGTTTTCAACC-ATTGGGACCGTAACCGAACGGTTACTGCAGCATTGCTTCGTA 255
Query 196 TGCAGTTTCATGATTGCT-TTGTCAGGGGTTGTGATGCTTCCCTCTTGATCGACCCAAGA 254
|||||||||||||||| | |||||| ||||||||||||||||||||||||||||||| |
Sbjct 256 TGCAGTTTCATGATTG-TGTTGTCAAAGGTTGTGATGCTTCCCTCTTGATCGACCCAACA 314
Query 255 -CCTGGAAGGCCATCAGAGAAAAGCA-CTGGACCAAACGCAAGCGTGAGAGGCTACGAGG 312
|| | ||| ||||||||||||||| | || | ||| ||| | |||||||| | ||||
Sbjct 315 ACC-GAAAGACCATCAGAGAAAAGCGTCGGG-CGAAATGCAGGGGTGAGAGGTTTCGAGA 372
Query 313 TCATTGATGAGGCTAAGAGACAACTAGAGGCT-GCATGTCCCCGAA--CTGTCTCATGCG 369
|||| ||||| ||||||| | |||| ||| || | || ||| ||| | ||||| ||||
Sbjct 373 TCATAGATGAAGCTAAGAAAGAACTCGAG-CTTGTTTG-CCC-GAAAACAGTCTCTTGCG 429
Query 370 CAGACATTGTAACTCTAGCCACAAGAGACTCGGTCGCATTAGCCGGCGGTCCAA-GATAC 428
|||||||||||||| ||||||| ||||||||| | |||||||| || ||||||| | | |
Sbjct 430 CAGACATTGTAACTATAGCCACCAGAGACTCGATTGCATTAGCGGGTGGTCCAAAGTT-C 488
Query 429 TCAGTACCAACAGGTAGACGTGATGGATTAAGGTCAAACCCTGGTGATGTGAACTTACCC 488
||||| |||||| ||||| ||||||||||| ||||||||| ||||||| || || |
Sbjct 489 AAAGTACGAACAGGAAGACGCGATGGATTAAGATCAAACCCTAGTGATGTTAAATTGCTA 548
Query 489 GGACCAACAATT-CCGGTTAGCG-CATCTATCCAATTGTTTGCAGCTCA-AGGTATGAAT 545
||||||||| || ||| | || |||| ||| || ||| | || | |||| | |||
Sbjct 549 GGACCAACAGTTTCCG-TG-GCTACATCAATCAAAGCATTTAAATCT-ATAGGTTTTAAT 605
Query 546 ACCAA-CGAT-ATGGTTACACTTATTGGTGGTGGACACAGC-GTTGGTGTTGCACATTGC 602
|| | | |||||| |||||||||||||||| |||| | || ||||||||||||||
Sbjct 606 GT-AAGC-ACCATGGTTGCACTTATTGGTGGTGGCCACA-CTGTCGGTGTTGCACATTGT 662
Query 603 AGTCTCTT-CAGGGACAGGCTTGCCGACCC-AGCAATGGACAGGTCATTGA-ATGCTAGG 659
||||| || |||| | ||| || || || | ||||||||| | ||| | |||| |
Sbjct 663 AGTCTTTTTCAGG-ATAGGATTAAGGATCCTAA-AATGGACAGCAAACTGAGA-GCTAAG 719
Query 660 TTGAGGAACACATGTCGTGCCCCAAATGACCCGA-CAGTCTTTTTGGACCAAAGGACTCC 718
|| | ||| ||||||||| ||| || ||||| | |||| || ||||||||| || ||
Sbjct 720 TTAAAGAAGTCATGTCGTGGCCCGAACGACCC-ATCAGTGTTCATGGACCAAAATACGCC 778
Query 719 ATTTACTGTGGATAACGCAATCTATGGAGAGATCCGAC-GTCAAAGAGGAATTCTAAGAA 777
||||| || || || | ||||||| || |||| || | ||| ||| ||| || ||||
Sbjct 779 ATTTAGAGTAGACAATGAAATCTATAGACAGATGATACAG-CAACGAGCAATCCTTAGAA 837
Query 778 TTGATCAAAACTTGGGTCTCTCTGGATCAACCCG-TGGGATTGTGTC-GAGTTTTGCAT- 834
||||| | |||||| || | |||||||||| | | | |||||||| || ||||||||
Sbjct 838 TTGATGACAACTTGATTCGCGATGGATCAACCAGGTCG-ATTGTGTCAGA-TTTTGCATA 895
Query 835 CAAGCAATACACTCTTCAGACAGAGATTTGCCCAAGCAATGGTGAAAATGGGC-ACCATT 893
||| ||||| | | |||| | |||| |||||| |||| ||| ||||||||| | ||
Sbjct 896 CAA-CAATAAATTATTCAAAGAGAGTTTTGCCGAAGCGATGCAGAAAATGGGTGAA-AT- 952
Query 894 AGG-GTTCTCACTGGACGGTCC-GGAGAGATCAGGAGAAACTGCAGA-CTGTTCAACAAC 950
||| ||||| || ||| | | | ||||||||||||| |||||||||| | |||||||||
Sbjct 953 AGGAGTTCTTACGGGA-GATTCTGGAGAGATCAGGACAAACTGCAGAGCC-TTCAACAAC 1010
> AT1G34330.1 | Symbols: | pseudogene, putative peroxidase, similar
to anionic peroxidase GI:559235 from (Petroselinum crispum);
blastp match of 35% identity and 2.3e-53 P-value to GP|21426121|gb|AAM52318.1|AC105363_7|AC105363
Putative peroxidase
{Oryza sativa (japonica cultivar-group)} | chr1:12528095-12529132
FORWARD LENGTH=1038
Length=1038
Score = 385 bits (208), Expect = 5e-106
Identities = 571/741 (77%), Gaps = 46/741 (6%)
Strand=Plus/Plus
Query 221 GGGTTGTGATGCTTCCCTCTTGATCGACCCAA-GACCTGGAAGGCCATCAGAGAAAAGCA 279
|||||||||||||||||||||||||||| ||| | || | ||||||||| |||||||||
Sbjct 304 GGGTTGTGATGCTTCCCTCTTGATCGACTCAACG-CCCGAAAGGCCATCTGAGAAAAGCG 362
Query 280 CTGGA-CCAAACGCAAGCGTGAGAGGCTACGAGGTCATTGATGAGGCTAAGAGACAACTA 338
| ||| |||||| |||||||||||||| |||| |||| ||||||| ||||| | | ||
Sbjct 363 C-GGAGGCAAACGTAAGCGTGAGAGGCTTCGAGATCATCGATGAGGTTAAGAAAGAGCTT 421
Query 339 GAGGCT-GCATGTCCC-CGAACTGTCTCATGCGCAGACATTGTAACTCTAGCCACAAGAG 396
|| | | | || ||| ||| |||||||||||||||||||||||||||||||||| ||
Sbjct 422 GA-GATAGTTTG-CCCAAAAACAGTCTCATGCGCAGACATTGTAACTCTAGCCACAAAAG 479
Query 397 ACTCGGTCGCATTAGCCGGCGGTCCAAGATACTCAGTACCAACAGG-TAGACGTGAT--- 452
||||| | |||||||| || |||||| | | | |||||| |||||| ||| || ||
Sbjct 480 ACTCGATTGCATTAGCGGGTGGTCCACGTTTCACAGTACAAACAGGATAG--GTAATTTC 537
Query 453 -G-GATTAAGGTCAAACCCT-GGTGATGTGAACTTACCCGGACCAAC-AATT-CCGGTTA 507
| |||| | |||| ||| || | ||||| || ||||||||| | |||| ||| |
Sbjct 538 CGTGATTTATATCAAGTCCTAGG-GCTGTGATTTTGCCCGGACCA-CTAATTTCCG-TG- 593
Query 508 GC-GCATCTATCCAAT-TGTTTGCAGCTCAAGGTATGAATACCAACGATATGGTTACACT 565
|| | ||| ||| || | |||| || | ||||| ||||| || | | |||||| ||||
Sbjct 594 GCTGTATCAATCAAAGAT-TTTGAAGGTAAAGGTTTGAATGTCACCAACATGGTTGCACT 652
Query 566 TATTGGTGGTGGACACAGCGTTGGTGTTGCACATTGCAGTCTCTT-CAGGGACAGGCTTG 624
|||||||||||| |||||||| |||||||||||||||||||| || |||| | ||||||
Sbjct 653 TATTGGTGGTGGTCACAGCGTCGGTGTTGCACATTGCAGTCTTTTTCAGG-ATAGGCTTA 711
Query 625 CCGACCC-AGCAATGGACAGGTCATTGAATGCTAGGTTG-AGGAACACATGTCGTGCCCC 682
|| || | ||||||||| | |||| |||| ||| || ||||||||||||| ||
Sbjct 712 AGGATCCTAA-AATGGACAGCAAACTGAAAGCTAAGTTACAG-AACACATGTCGTGGTCC 769
Query 683 AAATGACCCGA-CAGTCTTTTTGGACCAAAGGACTCCATTT-ACTGTGGATAACGCAA-T 739
||||||||| | |||| | |||||||||| ||| ||| || | || || || ||| |
Sbjct 770 AAATGACCC-ATCAGTGGTCTTGGACCAAATGACGCCACTTGAG-GTAGACAAT-CAAAT 826
Query 740 CTATGGAGAGATCCGACGTCAAAGAGGAATTCTAAGAATTGATCAAAACTTGGGTCTCTC 799
|||| | |||| | ||||||||||||| || ||||||||||||||||||||||||
Sbjct 827 CTATAAACAGATAAAAAGTCAAAGAGGAATCCTTAGAATTGATCAAAACTTGGGTCTCGA 886
Query 800 TGGA-TCAACCCGTGGGATTGTGTCGAGTTTTGCATCAA--GCAATACACTCTTCAGACA 856
|| | |||||| || |||| || || | |||||||| || | || ||| | ||| || |
Sbjct 887 TG-ACTCAACCAGTAGGATCGTATCAAATTTTGCATTAAATG-AA-ACATTATTCGGAGA 943
Query 857 GAGATTTGCCCAAGCAATGGTGAAAATGGGC-ACCATTAGGGTTCTCACTGGACGGTCCG 915
|||||||| |||||||| || |||||| | || | ||||| || ||| || |
Sbjct 944 AAGATTTGCTGAAGCAATGCAGATAATGGGTGAA-ATAAAAGTTCTTACGGGAAATTCTG 1002
Query 916 GAGAGATCAGGAGAAACTGCA 936
|||||||||||| ||||||||
Sbjct 1003 GAGAGATCAGGACAAACTGCA 1023
Score = 147 bits (79), Expect = 3e-34
Identities = 163/203 (80%), Gaps = 8/203 (4%)
Strand=Plus/Plus
Query 21 ATGAGGGCAATCACAGCTTTGTTTTTCCTTTTCTGTTTCGTTGCTCCCTCTGCTTT-GGC 79
||||||||||||||||||| ||||||| ||||||| ||| ||| |||||||| ||| ||
Sbjct 1 ATGAGGGCAATCACAGCTTCGTTTTTCATTTTCTGCTTCCTTGTTCCCTCTGTTTTCGG- 59
Query 80 GCAGCTCCGACAAGGGTTCTACGGCCGCTCATGCCCTCGAGCTGAATCTATCGTTG-CTA 138
| ||||||||| ||||| || | | | |||||||||| |||||||||| || || |||
Sbjct 60 GAAGCTCCGACGTGGGTTTTATGACAGTTCATGCCCTCTCGCTGAATCTACCG-TGTCTA 118
Query 139 -ATGTTGTTGCCAGCCGTTTC-CGCCGTGACCGTTCCATCACTGCTGCATTTCTTCGTAT 196
| |||||||||| | | | | || | ||| || | ||||| || || ||||||||
Sbjct 119 GA-GTTGTTGCCAAACATCACTC-CCTTAACCAAACCGTTACTGCAGCGTTGCTTCGTAT 176
Query 197 GCAGTTTCATGATTGCTTTGTCA 219
|||||||||||||||||||||||
Sbjct 177 GCAGTTTCATGATTGCTTTGTCA 199
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 47923376238
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5