BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg945635 Length=1002 Score E Sequences producing significant alignments: (Bits) Value AT4G24650.1 | Symbols: ATIPT4, IPT4 | isopentenyltransferase 4 ... 1585 0.0 > AT4G24650.1 | Symbols: ATIPT4, IPT4 | isopentenyltransferase 4 | chr4:12720394-12721443 FORWARD LENGTH=1050 Length=1050 Score = 1585 bits (858), Expect = 0.0 Identities = 951/997 (95%), Gaps = 2/997 (0%) Strand=Plus/Plus Query 1 GTGTTTATCAGTCTCAATTTACGACATGAATTGTAAAGACAAAATGGTTGTGATCATGGG 60 |||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 48 GTGTTTCTCAATCTCAATTTACGACATGAAGTGTAATGACAAAATGGTTGTGATCATGGG 107 Query 61 TGCCACCGGTTCTGGCAAGTCATCACTCTCGGTTGATCTCGCTTTACATTTCAAAGCCGA 120 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 108 TGCCACCGGTTCTGGCAAGTCATCACTCTCTGTTGATCTCGCTTTACATTTTAAAGCCGA 167 Query 121 GATCATCAACTCTGACAAAATGCAGTTCTATGATGGCTTGAAGATCACCACGAATCAATC 180 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 168 GATCATCAACTCTGACAAAATGCAGTTCTACGATGGCTTGAAGATCACCACGAATCAATC 227 Query 181 GACCATTTCGGATCGACGTGGAGTGCCACATCACCTTCTCGGTGAACTAAACCCGGAGGC 240 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 228 GACCATTGAAGATCGACGTGGAGTGCCACATCACCTTCTCGGTGAACTAAACCCGGAGGC 287 Query 241 TGGAGAAGTCACAGCAGCAGAATTTCGCGTTATGGCGGCTAAAGCCATCTCCGAGATTAC 300 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct 288 TGGAGAAGTCACAGCGGCAGAATTTCGCGTTATGGCGGCTGAAGCCATCTCCGAGATTAC 347 Query 301 TCAACGTAAAACA-CTCCCAATCCTTGCCGGTGGATCCAACTCCTACATTCATGCACTCC 359 ||||||||||| | ||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct 348 TCAACGTAAAA-AGCTCCCAATCCTTGCCGGTGGATCCAACTCATACATTCATGCTCTCC 406 Query 360 TTGCAAAATCTTATGATCCTGAAAACTATCCGTTTTCTGATCACAAGGGCTCAATCTGCT 419 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 407 TTGCAAAATCTTATGACCCTGAAAACTATCCGTTTTCTGATCACAAGGGCTCAATCTGCT 466 Query 420 CGGAGTTGAAATATGATTGTTGTTTCATTTGGATAGATGTGGACCAGCCTGTCTTATTCG 479 | ||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||| Sbjct 467 CCGAGTTGAAATATGATTGTTGTTTCATTTGGATAGATGTGGATCAGTCTGTGTTATTCG 526 Query 480 AGTATCTTTCTTTGCGTTTGGATGTGATGATGAAGTCAGGTATGTTCGAGGAGATCGCTG 539 ||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 527 AGTATCTTTCTTTACGTTTGGATCTTATGATGAAGTCAGGTATGTTCGAGGAGATCGCTG 586 Query 540 AGTTCCACCGCGCTAAGAAGGCCCCGAAAGAGCCATTGGGGTTATGGAAGGCTATAGGAG 599 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 587 AGTTCCACCGCTCTAAGAAGGCCCCGAAAGAGCCATTGGGGATATGGAAGGCTATAGGAG 646 Query 600 TGCAAGAGTTTGATGACTACCTCAAAAAGTACAAGTGGGACGATGACATGGATAAATGGG 659 ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 647 TGCAAGAGTTTGATGACTACCTCAAAATGTACAAGTGGGACAATGACATGGATAAATGGG 706 Query 660 ACACTATGAGAAAGGAGGCTTATGAGAAGGCGGTGAGAGCGATCAAAGAAAACACGTTTC 719 || ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct 707 ACCCTATGAGAAAGGAGGCTTATGAGAAGGCGGTGAGAGCCATCAAAGAAAACACATTTC 766 Query 720 AGCTCACAAAGGATCAAATCAAGAAGATCGACAAGTTGAGAAATGCCGGGTGGGACATAA 779 ||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| Sbjct 767 AGCTCACAAAGGATCAAATCACGAAGATCAACAAGCTGAGAAATGCCGGGTGGGACATAA 826 Query 780 AGAAGGTGGATGCTACAGCATCGTTTCGAGAGGCAATTAGGGCAGCCAAGGAAGGTGAAG 839 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 827 AGAAGGTGGATGCTACAGCATCGTTTCGAGAGGCAATTAGGGCAGCCAAGGAAGGCGAAG 886 Query 840 GTGTAGCCGAGATGCAGAGAAAGATATGGAACAATGAAGTGTTGGAACCGTGTGTGAAGA 899 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 887 GTGTAGCCGAGATGCAGAGAAAGATATGGAACAAGGAAGTGTTGGAACCGTGTGTGAAGA 946 Query 900 TTGTCAAGAGCCACTTGGACCAGCCGATCAACtattattattattatttttatttaATAA 959 |||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||| ||| Sbjct 947 TTGTCAGGAGCCACTTGGACCAACCGATCAACTATTATTATTATTACTTTTATTTACTAA 1006 Query 960 AAAGACTCTTAAGTCTTAACTAGCAAGGACTCATATC 996 ||||| | ||||||||||||||| ||||| ||||| Sbjct 1007 AAAGATTTTTAAGTCTTAACTAGTTTGGACTAATATC 1043 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49078761619 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5