BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg945696
Length=2179
Score E
Sequences producing significant alignments: (Bits) Value
AT4G24100.1 | Symbols: | Protein kinase superfamily protein | ... 3445 0.0
AT4G10730.1 | Symbols: | Protein kinase superfamily protein | ... 1482 0.0
> AT4G24100.1 | Symbols: | Protein kinase superfamily protein
| chr4:12515076-12519841 FORWARD LENGTH=2782
Length=2782
Score = 3445 bits (1865), Expect = 0.0
Identities = 2084/2188 (95%), Gaps = 22/2188 (1%)
Strand=Plus/Plus
Query 1 TTTTAAAGCGACGGAAGAAGATGGTGGGAGGAGGA--A-GTAGTAgtggtggtggtggtg 57
||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct 128 TTTTAAAGCGACGGAAGAAGATGGTGGGAGGAGGAGGAGGTAGTAGTGGTCGTGGTGGTG 187
Query 58 ttttccgtggtggtggtagtggtAAGCAGCAGAGAGGTTTCTCTTTGAATCCTAAAGATT 117
| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||| |
Sbjct 188 --GT-AGTGGTAGTGGTAGTAGTAAGCAGCAGAGAGGTTTCTCTATGAATCCTAAAGACT 244
Query 118 ATAAGCTTTTGGAAGAAATAGGCCATGGAGCTAGCGCTGTTGTCTATCGAGCGATCTATC 177
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 245 ATAAGCTAATGGAAGAAATAGGCCATGGAGCTAGCGCTGTTGTCTATCGAGCGATCTATC 304
Query 178 TCCCGACTAATGAAGTCGTCGCCATCAAGTGTTTGGATCTCGATCGCTGCAATAGCAATC 237
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 305 TCCCTACTAATGAAGTCGTCGCCATCAAGTGTTTGGATCTCGATCGCTGCAATAGCAATC 364
Query 238 TGGATGATATTAGGAGGGAATCTCAGACTATGAGTTTGATAGACCATCCCAACGTTATAA 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 365 TGGATGATATTAGGAGGGAATCTCAGACTATGAGTTTGATAGACCATCCCAACGTTATAA 424
Query 298 AGTCGTTTTGTTCATTTTCTGTCGACCACAGTCTTTGGGTTGTTATGCCATTCATGGCGC 357
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 425 AGTCGTTTTGTTCATTCTCTGTCGACCATAGTCTTTGGGTTGTTATGCCATTCATGGCTC 484
Query 358 AAGGTTCATGTTTGCATCTTATGAAGACTGCATATTCAGACGGATTTGAAGAGTCGGCTA 417
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 485 AAGGTTCGTGTTTGCATCTTATGAAGACTGCGTATTCAGACGGATTTGAAGAGTCTGCTA 544
Query 418 TTTGTTGTGTACTTAAA-GAAACTCTTAAAGCTCTTGATTATCTTCATAAACAAGGCCAT 476
| ||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct 545 TATGTTGTGTA-TTAAAAGAAACTCTTAAAGCTCTTGATTATCTTCATAGACAAGGCCAT 603
Query 477 ATCCATCGGGATGTGAAGGCTGGAAACATACTTCTTGATGACAGTGGTGAGATTAAGCTT 536
|||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 604 ATCCATCGGGATGTTAAGGCTGGAAACATACTTCTTGATGACAATGGTGAGATTAAGCTT 663
Query 537 GGCGATTTTGGCGTCTCTGCTTGCTTGTTTGACAACGGTGATAGGCGACGTGCAAGAAAC 596
||||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||||
Sbjct 664 GGCGATTTTGGTGTCTCTGCTTGCTTGTTTGATAACGGTGATAGGCAACGTGCTAGAAAC 723
Query 597 ACATTTGTTGGTACTCCTTGCTGGATGGCACCGGAAGTCTTGCAGCCGGGAGAA-GGATA 655
|||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||
Sbjct 724 ACATTTGTTGGTACTCCTTGCTGGATGGCACCGGAAGTTTTGCAGCCGGGA-AATGGATA 782
Query 656 CAATTCCAAGGCTGATATCTGGTCATTTGGTATAACAGCTCTTGAACTGGCCCATGGTCA 715
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct 783 CAATTCCAAGGCTGATATCTGGTCATTTGGTATAACAGCACTTGAATTGGCCCATGGTCA 842
Query 716 TGCACCTTTCTCAAAATATCCCCCCATGAAGGTGCTCCTAATGACTATTCAAAACGCACC 775
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 843 TGCACCTTTCTCAAAATATCCTCCCATGAAGGTGCTCCTAATGACTATTCAAAACGCACC 902
Query 776 TCCTGGTCTTGATTATGATCGTGATAAGAAATTTTCGAAGTCCTTTAAAGAAATGGTTGC 835
|||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 903 TCCTGGCCTTGATTATGACCGTGATAAGAAATTTTCTAAGTCCTTTAAAGAAATGGTTGC 962
Query 836 AATGTGTTTGGTGAAAGATCAAACAAAAAGGCCAACTGCTGAAAAACTGCTGAAGCACTC 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AATGTGTTTGGTGAAAGATCAAACAAAAAGGCCAACTGCTGAAAAACTGCTGAAGCACTC 1022
Query 896 ATGTTTCAAACACACGAAGCCTCCAGAGCTTTCTGTGAAAAAATTATTTTCCGATTTACC 955
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 1023 CTGTTTCAAACACACGAAGCCTCCAGAGCAAACTGTGAAAATTTTATTTTCCGATTTACC 1082
Query 956 ACCTCTTTGGACACGAGTAAAATCTCTTCAGGATAAGGATGCTCAACAGCTTGCATTAAA 1015
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1083 ACCTCTTTGGACACGTGTAAAATCTCTTCAGGATAAGGATGCTCAACAGCTTGCATTAAA 1142
Query 1016 GAGAATGGCCACTGCTGACGAGGAAGCTATATCACAGAGCGAATACCAAAGAGGAGTGAG 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1143 GAGAATGGCCACTGCTGACGAGGAAGCTATATCACAGAGCGAATACCAAAGAGGAGTGAG 1202
Query 1076 CGCTTGGAATTTTGACGTCAGAGACTTGAAAACACAAGCATCTTTGTTAATTGATGATGA 1135
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1203 CGCTTGGAACTTTGACGTCAGAGACTTGAAAACACAAGCATCTTTGTTAATTGATGATGA 1262
Query 1136 TGATCTAGAAGAGAGTAAGGAAGATGATGAAATATTATGTGCACAGTTTAATAAGGTGAA 1195
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1263 TGATCTAGAAGAGAGTAAGGAAGATGAAGAAATATTATGTGCACAGTTTAATAAGGTGAA 1322
Query 1196 TGACAGAGTGCAAGTATTTGATAGTCTGCAACTATATGAAACCATGAACGAAAAAGAAAA 1255
|||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 1323 TGACAGAGAGCAAGTATTTGATAGTCTGCAACTATATGAAAACATGAACGGAAAAGAAAA 1382
Query 1256 GGTTTCCAATACTGAGGTGGAAGAACCAACCTGCGAAGAGAAATTCACTTTCATTACAAC 1315
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 1383 GGTTTCCAATACTGAGGTGGAAGAACCAACCTGCAAAGAGAAATTCACTTTCGTTACAAC 1442
Query 1316 TGCTTCTTCTTTAGAACGAATGTCACCAAATTCAGAGCATGACATTCCTGAGGCCAAGGT 1375
| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1443 TACTTCTTCTTTAGAACGAATGTCACCAAATTCAGAGCATGACATTCCCGAGGCCAAGGT 1502
Query 1376 TAAGCCAGTAAGACGCCAAAGCCAGAGTGGACCACTTACAAGCAAGACCGTATTAAGCCA 1435
||||||| ||||||||||||| |||||||||||||||||||||| ||| |||||||||||
Sbjct 1503 TAAGCCATTAAGACGCCAAAGTCAGAGTGGACCACTTACAAGCAGGACTGTATTAAGCCA 1562
Query 1436 CTCAGCTTCAGA-AAAAGGGCATATCTTTGAAAGATCCGAGAGTGAACAGCAGACAGCAT 1494
||| |||||||| ||||| |||||||||||||||||||||||||||| |||||| |||
Sbjct 1563 CTCGGCTTCAGAGAAAAGT-CATATCTTTGAAAGATCCGAGAGTGAACCGCAGACGGCAC 1621
Query 1495 CAACAGTCCGAAGAGCACCCAGCTTTAGTGGTCCTTTGAATCTTCCAACCCGTGCTTCTT 1554
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1622 CAACAGTCCGAAGAGCACCCAGCTTTAGTGGTCCTTTGAATCTTTCAACCCGTGCTTCTT 1681
Query 1555 CAAACAGTTTGTCAGCTCCCATTAAATACTCAGGAGGATTCCGTGATTCTCTGGATGATA 1614
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1682 CAAACAGTTTGTCTGCTCCCATCAAATACTCAGGAGGATTCCGTGATTCTCTGGATGATA 1741
Query 1615 AGTCAAAGGCTAATCTGGTTCAGAAAGGACGATTTTCAGTAACATCAGGAAATGTAGATC 1674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1742 AGTCAAAGGCTAATCTGGTTCAGAAAGGACGATTTTCAGTAACATCAGGAAATGTAGATC 1801
Query 1675 TTGCGAAGGATGTTCCATTAAGTATTGTCCCTCGTCGATCTCCGCAGGCGACCCCTCTGA 1734
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||
Sbjct 1802 TTGCGAAGGATGTTCCATTAAGTATAGTCCCTCGTCGATCTCCACAGGCGACCCCCCTGA 1861
Query 1735 AAAAATCTGCAAGTGTGGGTAACTGGATACTTGAGCCCAAAATGCCAACAGCTCAGCCTC 1794
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1862 GAAAATCTGCAAGTGTGGGTAACTGGATACTTGAGCCCAAAATGCCAACAGCTCAGCCTC 1921
Query 1795 CGACCATCAAGGAGTATAGTAGCCATCCTACGTCTTCCTCTTCCTCACTTATCGTGCCTC 1854
||| ||||||||| ||||||||||||||||||||||||| || || | || | ||||
Sbjct 1922 AGACGATCAAGGAGCATAGTAGCCATCCTACGTCTTCCTCA-CC-CA-TCAT-G--CCTC 1975
Query 1855 AACTTCAACATCTATTCCAGCAAAACTCAATACAACAGGATCTTATTATGAATTTACTGA 1914
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1976 AACTTCAACATCTATTCCAGCAAAACTCAATACAACAGGATCTTATTATGAATTTACTAA 2035
Query 1915 ATAGCATACAACCTGCGGAGGCAACAGAAGGTTCTCAATCTGGGAAGTTACCACCTTTGC 1974
||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2036 ATAGCTTACAACCCGTGGAGGCAACAGAAGGTTCTCAATCTGGGAAGTTACCACCTTTGC 2095
Query 1975 CTCGCTCAGACAGTAATGGAAATGTTGAACCCGTGGCTTCTGAGAGGGAGAGGTTACTTC 2034
|||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||
Sbjct 2096 CTCGCTCAGACAGTAATGGAAACGTTGAACCTGTGGCTTCAGAGAGGGAGAGGTTACTTC 2155
Query 2035 TTAGCAGTATCTCTGACCTTCGTGCTAGGCTGGATGACTTAACGGAGGAACTGGATATAG 2094
||||||||||||| ||||| |||||||||||||| ||||||||||||||||| |||||||
Sbjct 2156 TTAGCAGTATCTCCGACCTCCGTGCTAGGCTGGACGACTTAACGGAGGAACTCGATATAG 2215
Query 2095 AGAAATCAAAATACAGCCAACTGCAACAGAAATTGAAAGCATTTACAGGTCGCGAACA-T 2153
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct 2216 AGAAATCAAAATACAGCCAACTGCAACAGAAATTGAAAGCATTCACGGGTCGCGAACACT 2275
Query 2154 --GTGTAAGCAGAAGGGAAAGCGACACT 2179
|||||| |||| ||||||||||||||
Sbjct 2276 AAGTGTAACCAGA-GGGAAAGCGACACT 2302
> AT4G10730.1 | Symbols: | Protein kinase superfamily protein
| chr4:6609418-6614883 REVERSE LENGTH=2608
Length=2608
Score = 1482 bits (802), Expect = 0.0
Identities = 1383/1657 (83%), Gaps = 66/1657 (4%)
Strand=Plus/Plus
Query 64 gtggtggtggtagtggtAAGCAGCAG-AG--AGGTTTCTCTTTGAATCCTAAAGATTATA 120
||||||||||| ||| |||| || || || |||||||||| | || |||||||||||||
Sbjct 180 GTGGTGGTGGTGGTGATAAGAAGAAGAAGAAAGGTTTCTCTGTAAACCCTAAAGATTATA 239
Query 121 AGCTTTTGGAAGAAATAGGCCATGGAGCTAGCGCTGTTG-TCTATCGAGCGATCTATCTC 179
| ||| |||||||| | || |||| ||||| ||||||| || |||| || || |||||
Sbjct 240 AACTTATGGAAGAAGTTGGATATGGTGCTAGTGCTGTTGTTC-ATCGTGCTATTTATCTT 298
Query 180 CCGACTAATGAAGTCGTCGCCATCAAGTGTTTGGATCTCGATCGCTGCAATAGCAATCTG 239
|| ||||||||||| || || ||||||| |||||||||||||||||||||||| ||||||
Sbjct 299 CCTACTAATGAAGTTGTTGCTATCAAGTCTTTGGATCTCGATCGCTGCAATAGTAATCTG 358
Query 240 GATGATATTAGGAGGGAATCTCAGACTATGAGTTTGATAGACCATCCCAACGTTATAAAG 299
|||||||| |||||||| |||||||||||| ||||||||||||||| || |||||||||
Sbjct 359 GATGATATAAGGAGGGAGGCTCAGACTATGACTTTGATAGACCATCCGAATGTTATAAAG 418
Query 300 TCGTTTTGTTCATTTTCTGTCGACCA-CAGTCTTTGGGTTGTTATGCCATTCATGGCGCA 358
||||||||||| ||| |||| || || || ||| ||||| ||||||||||| ||||| ||
Sbjct 419 TCGTTTTGTTCGTTTGCTGTTGATCATCA-TCTATGGGTCGTTATGCCATTTATGGCTCA 477
Query 359 AGGTTCATGTTTGCATCTTATG-AAGACTGCATATTCAGACGGATTTGAAGAGTCGGCTA 417
||||| ||||||||||| ||| ||| | || ||| |||| |||||||||||| ||||||
Sbjct 478 GGGTTCGTGTTTGCATCTAATGAAAG-CAGCGTATCCAGATGGATTTGAAGAGGCGGCTA 536
Query 418 TTTGTTGTGTACTTAAAGAAACTCTTAAAGCTCTTGATTATCTTCATAAACAAGGCCATA 477
| |||| | | || |||||||| ||||||||||||||||||||||||| |||||| ||||
Sbjct 537 TATGTTCTATGCTGAAAGAAACACTTAAAGCTCTTGATTATCTTCATAGACAAGGGCATA 596
Query 478 TCCATCGGGATGTGAAGGCTGGAAACATACTTCTTGATGACAGTGGTGAGATTAAGCTT- 536
||||||| ||||| |||||||||||||||||||||||||||| ||| ||||||||| ||
Sbjct 597 TCCATCGAGATGTTAAGGCTGGAAACATACTTCTTGATGACACTGGCGAGATTAAG-TTA 655
Query 537 GGCGATTTTGGCGTCTCTGCTTGCTTGTTTGACAACGGTGATAGGCGACGTGCAAGAAAC 596
|| |||||||| |||||||| || ||||||||||| || ||||||| ||||||||||||
Sbjct 656 GGTGATTTTGGTGTCTCTGCATGTTTGTTTGACAATGGCGATAGGCAACGTGCAAGAAAT 715
Query 597 ACATTTGTTGGTACTCCTTGCTGGATGGCACCGGAAGTCTTGCAGCC-GGGAGAAGGATA 655
||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||
Sbjct 716 ACATTTGTTGGTACTCCATGCTGGATGGCACCGGAAGTCTTGCAGCCAGGGAG-TGGATA 774
Query 656 CAATTCCAAGGCTGATATCTGGTCATTTGGTATAACAGCTCTTGAACTGGCCCATGGTCA 715
|||||| ||||||||||| ||||| ||||| ||||| || || || |||| || |||||
Sbjct 775 CAATTCAAAGGCTGATATATGGTCTTTTGGAATAACGGCGCTGGAGTTGGCTCACGGTCA 834
Query 716 TGCACCTTTCTCAAAATATCCCCCCATGAAGGTGCTCCTAATGACTATTCAAAACGCACC 775
|||||||||||||||||||||||| |||||||| ||| |||||||||| ||||| |||||
Sbjct 835 TGCACCTTTCTCAAAATATCCCCCTATGAAGGTACTCTTAATGACTATCCAAAATGCACC 894
Query 776 TCCTGGTCTTGATTATGATCGTGATAAGAAATTTTCGAAGTCCTTTAAAGAAATGGTTGC 835
||||| ||||||||||| ||||||||||| ||||| ||||||||||||||| |||| ||
Sbjct 895 ACCTGGCCTTGATTATGACCGTGATAAGAAGTTTTCAAAGTCCTTTAAAGAATTGGTAGC 954
Query 836 AATGTGTTTGGTGAAAGATCAAACAAAAAGGCCAACTGCTGAAAAACTGCTGAAGCACTC 895
| ||||| |||||||||||||||||||||||||||||||||||||| || |||| |||||
Sbjct 955 ATTGTGTCTGGTGAAAGATCAAACAAAAAGGCCAACTGCTGAAAAATTGTTGAAACACTC 1014
Query 896 ATGTTTCAA-ACACACGAAGCCTCCAGAGCTTTCTGTGAAAAAATTATTT-TCCGATTTA 953
|| |||||| | | ||||||||||||| | | ||| |||||||||||| || ||||||
Sbjct 1015 ATTTTTCAAGA-ATGTGAAGCCTCCAGAGATCTGTGTAAAAAAATTATTTGTC-GATTTA 1072
Query 954 CCACCTCTTTGGACACGAGTAAAATCTCTTCAGGATAAGGATGCT-CAACAGCTTGCATT 1012
|||||||||||||| || |||||| ||||||||| ||||||||| || |||||||| ||
Sbjct 1073 CCACCTCTTTGGACTCGCGTAAAAGCTCTTCAGGCCAAGGATGCTGCA-CAGCTTGCTTT 1131
Query 1013 -AAAGAGAATGGCCACTGCTGACGAGGAAGCTATATCACAGAGCGAATACCAAAGAGGAG 1071
|||| |||||||| |||||||| |||| |||||||||||||| ||||||||||||||||
Sbjct 1132 GAAAG-GAATGGCCTCTGCTGACCAGGATGCTATATCACAGAGTGAATACCAAAGAGGAG 1190
Query 1072 TGAGCGCTTGGAATTTTGACGTCAGA-GACTTGAAA-ACACAAGCATCTTTGTTA-ATTG 1128
| || |||||||| || | || || || |||||| | ||||||||||||| || || |
Sbjct 1191 TAAGTGCTTGGAACTTCAATATC-GAAGATTTGAAAGA-ACAAGCATCTTTGCTAGAT-G 1247
Query 1129 ATGATGATGAT-CTAGA-AGAGAGTAAGGAAGATGATGAAATATTATGTGC-A-CAGTT- 1183
||||||| || ||| | |||||||| |||||| || ||| | || || || | |||||
Sbjct 1248 ATGATGAC-ATTCTA-ACAGAGAGTAGGGAAGAAGAAGAA-TCTTTTG-GCGAACAGTTG 1303
Query 1184 --TAATAAGGTGAATGACAGAGTGCAAGTATTTGATAGTCTGCAACTATATGAAACCATG 1241
|||||||||||||||||||| |||||||| || ||||| |||| ||||| ||||
Sbjct 1304 CATAATAAGGTGAATGACAGAGGGCAAGTATCTGGTAGTCAATTGCTATCTGAAAACATG 1363
Query 1242 AACGAAAAAGAAAAGGTTTCCA-ATACTGAGGTGGAAGAACCAACCTGCGAAGAGAAATT 1300
|| | ||| ||||| | ||| | |||||||||||| |||||| | ||| ||||||||||
Sbjct 1364 AATGGAAAGGAAAAAGCTTC-AGATACTGAGGTGGTAGAACCTATCTGTGAAGAGAAATC 1422
Query 1301 CACTTTCA-TTACAACTGCTTCTTCTTTAGAACGAAT-GTCACCAAATTCAGAGCATGAC 1358
|||| ||| || |||| |||||||| | |||| || | || ||| |||||| || |||
Sbjct 1423 CACTCTCAATT-CAACCACTTCTTCTGTGGAAC-AACCGGCATCAAGTTCAGAACAAGAC 1480
Query 1359 ATTCCTGAGGCCAAGGTTAAGCCAGTAAGACGCCAAAGC-CAGAGTGGACCACTTACAAG 1417
|||| ||||||||| ||||||||| |||| ||| | | || |||||||||||| ||
Sbjct 1481 GTTCCACAGGCCAAGGGTAAGCCAGTGAGACTCCAGA-CTCATAGTGGACCACTTTCATC 1539
Query 1418 CAA-GACCGTATTAAGCCACTCAG-CTTCAGAAAAAGGG-CATATCTT-TGAAAGATCCG 1473
| | | || |||| | | |||| || |||| || || ||| || |||||| || |
Sbjct 1540 CGGTGTC-GTGTTAATCAATTCAGACT-CAGAGAA-GGTTCATGG-TTATGAAAGGTCTG 1595
Query 1474 AGAGTGAACAGCAGACAGCA-TCAACAGTCCGAAGAGCACCCAGCTTTAGTGGTCCTTTG 1532
||||||||| ||| || | | ||| ||||||| || ||||||||||||||||||||||||
Sbjct 1596 AGAGTGAACGGCA-ACTGAAATCATCAGTCCGGAGGGCACCCAGCTTTAGTGGTCCTTTG 1654
Query 1533 AATCTTCCAACCCGTGCTTCTTCAAACAGT-TTGTCAGCTCCCATTAAATACT-CAGGAG 1590
|||||||||| |||||||| |||||||| || |||||||| || |||| || | ||||
Sbjct 1655 AATCTTCCAAATCGTGCTTCAGCAAACAGTCTT-TCAGCTCCTATCAAAT-CTTCTGGAG 1712
Query 1591 GATTCCGTGATTCTCTGGATGATAAGTCAAAGGCTAATCTGGTTCAGA--AA-GGACGAT 1647
|||| ||||||||| | ||||| ||||| ||||||||| ||||||| | || ||| |||
Sbjct 1713 GATTTCGTGATTCTATAGATGACAAGTCGAAGGCTAATGTGGTTCAAATCAAAGGAAGAT 1772
Query 1648 TTTCAGTAACATCAGGAAA-TGTAGATCTTGCGAAGG 1683
||||||||||||||| ||| | | |||||||| ||||
Sbjct 1773 TTTCAGTAACATCAGAAAACT-TGGATCTTGC-AAGG 1807
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 108081773385
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5