BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg945743
Length=499
Score E
Sequences producing significant alignments: (Bits) Value
AT4G23670.1 | Symbols: | Polyketide cyclase/dehydrase and lipi... 743 0.0
AT3G26460.1 | Symbols: | Polyketide cyclase/dehydrase and lipi... 333 1e-90
AT3G26450.1 | Symbols: | Polyketide cyclase/dehydrase and lipi... 324 6e-88
AT2G01520.1 | Symbols: MLP328 | MLP-like protein 328 | chr2:235... 233 1e-60
AT2G01530.1 | Symbols: MLP329 | MLP-like protein 329 | chr2:239... 187 8e-47
> AT4G23670.1 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr4:12332560-12333804 REVERSE
LENGTH=890
Length=890
Score = 743 bits (402), Expect = 0.0
Identities = 459/487 (94%), Gaps = 2/487 (0%)
Strand=Plus/Plus
Query 7 gagagagagagaAATAAATGGCGACGTCGGGAACATACGTGACGGAGGTTCCATTGAAAG 66
|||||||||||||| |||||||||| |||||||| ||||||||||||||||| |||||||
Sbjct 132 GAGAGAGAGAGAAAGAAATGGCGACATCGGGAACGTACGTGACGGAGGTTCCGTTGAAAG 191
Query 67 GATCGGCGGAGAAACACTACAAGAGCTGGAAAAGCGAGAACCATGTCTTCCCTGACACCA 126
||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||
Sbjct 192 GATCGGCGGAGAAACACTACAAGAGCTGGAAGAGCGAGAACCATGTCTTCGCTGACGCCA 251
Query 127 TCGGCCAACACATCCATAACGTCGTTGTTCACGAAGGCGAACATGACGCTCACGGGTCTA 186
| ||||| |||||||| || ||||||||||||||||||||||||||| ||||||||||||
Sbjct 252 TTGGCCACCACATCCAAAATGTCGTTGTTCACGAAGGCGAACATGACTCTCACGGGTCTA 311
Query 187 TCAGGAGTTGGGACTACACATATGATGGAAAGAAGGAGACGTTCAAAGAGAAGAGAGAGA 246
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 312 TCAGGAGTTGGGACTACACATATGATGGAAAGAAGGAGATGTTCAAAGAGAAGAGAGAGA 371
Query 247 TAGATGACGAGAATAAAACATTGACGAAAAGAGGACTGGAGGGTCACCCGATGGAGCACC 306
||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| |
Sbjct 372 TAGATGATGAGAATAAAACATTGACGAAAAGAGGACTGGATGGTCACGTGATGGAGCATC 431
Query 307 TCAAAGTGTTTGATGTCATTTACCAATTTATTCCCAAATCTGAGGATAGCTGCGTCTGCA 366
||||||| |||||| |||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct 432 TCAAAGTATTTGATATCATCTACGAATTTATTCCCAAATCTGAGGATAGCTGCGTCTGCA 491
Query 367 AACTCACTATGCTATGGGAGAAGCGCAACGATGACTTTCCCGAACCAAGCGGCTACATGA 426
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 492 AAATCACTATGATATGGGAGAAGCGCAACGATGACTTTCCCGAACCAAGCGGCTACATGA 551
Query 427 AATTCGTCAAGCAAATGGTTGTTGACATTGAAGGCCACGTCAGCAAAGCTTAACCATCAT 486
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct 552 AATTCGTCAAGCAAATGGTTGTTGACATTGAAGGCCACGTCAACAAAGCTTAACCA-CAA 610
Query 487 CC-TCAC 492
|| ||||
Sbjct 611 CCATCAC 617
> AT3G26460.1 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr3:9683873-9684657 REVERSE
LENGTH=689
Length=689
Score = 333 bits (180), Expect = 1e-90
Identities = 400/501 (80%), Gaps = 35/501 (7%)
Strand=Plus/Plus
Query 6 agagagagagagaAATAAATGGCGACGTCGGGAACATACGTGACGGAGGTTCCATTGAAA 65
|||||| |||||| |||||||||||||||||||||||||||||||||| || || |||
Sbjct 33 AGAGAGGGAGAGAGCGAAATGGCGACGTCGGGAACATACGTGACGGAGGTACCGTTAAAA 92
Query 66 GGATCGGCGGAGAAACACTACAAGAGCTGGAA-AAGCGAGAACCATGTCTTCCCTGACAC 124
||| | || |||||||||| | |||| |||| || |||||||||| ||||||||||| |
Sbjct 93 GGAACAGCAGAGAAACACTTCCAGAGGTGGAGGAA-CGAGAACCATCTCTTCCCTGACGC 151
Query 125 CATCGGCCAACACATCCATAACGTCGTT---GTTCACGAAGGCGAACATGACGCTCACGG 181
| ||||| |||||||| | || ||| |||||||| |||||| ||| |||||||
Sbjct 152 TGTTGGCCACCACATCCA-AG-GT-GTTTCTGTTCACGACGGCGAATGGGACACTCACGG 208
Query 182 --GTCTATCAGGAGTTGGGACTACACATATG--A--TGGAAAG-AAGGAG-ACGTTCAAA 233
| | |||| || |||| ||||||||| || | ||||||| ||| || | |||||
Sbjct 209 AAG-C-ATCAAGATTTGGAACTACACAT-TGGGAGATGGAAAGCAAG-AGGAA-TTCAAG 263
Query 234 GAGAAGAGAGAGATAGATGACGAGAATAAAACATTGACGAAAAG-AGGACTGGAGGGTCA 292
|||| ||||||||| || || |||||||| ||| ||| | | ||||||||| |||||
Sbjct 264 GAGAGGAGAGAGATGGACGATGAGAATAACACAATGAAGGTT-GTAGGACTGGAAGGTCA 322
Query 293 CCCGATGGAGCACCTCAAAGTGTTTGATG-TC-ATTTACCAATTTATTCCCAAATCTGAG 350
| ||||||||| ||||| |||| ||| | || |||| ||||||||||||||| |||||
Sbjct 323 CGTGATGGAGCAGCTCAAGGTGTATGA-GATCGATTT-CCAATTTATTCCCAAGTCTGAA 380
Query 351 GATAGCT-GCGTCTGCAAACTCACTATGCTATGGGAGAAGCGCAACGATGACTTTCCC-G 408
|| || | || |||||||| |||||||| |||||||||||||||||||||| |||||| |
Sbjct 381 GA-AGATTGCATCTGCAAAATCACTATGATATGGGAGAAGCGCAACGATGA-TTTCCCCG 438
Query 409 AACCAAGCGGCTACATGAAATTCGTCAAGCAA-ATGGTTGTTGACATTGAAGG-CCACGT 466
|||||||| |||||||| || || ||||| | |||||| |||| || || || ||||||
Sbjct 439 AACCAAGCAGCTACATGCAACTCCTCAAG-AGCATGGTTATTGATATGGA-GGACCACGT 496
Query 467 CAGCAAAGCTTAACCATCATC 487
| ||||||||| || ||||
Sbjct 497 CCTTAAAGCTTAATCAACATC 517
> AT3G26450.1 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr3:9681298-9683434 REVERSE
LENGTH=889
Length=889
Score = 324 bits (175), Expect = 6e-88
Identities = 385/483 (80%), Gaps = 27/483 (6%)
Strand=Plus/Plus
Query 12 agagagaAATAAATGGCGACGTCGGGAACATACGTGACGGAGGTTCCATTGAAAGGATCG 71
||||||| | ||||||||||||||||||||||||||||| |||| || || |||||| ||
Sbjct 124 AGAGAGAGAGAAATGGCGACGTCGGGAACATACGTGACGCAGGTGCCGTTAAAAGGAACG 183
Query 72 GCGGAGAAACACTACAAGAGCTGGAA-AAGCGAGAACCATGTCTTCCCTGACACCATCGG 130
| ||||||||||| |||||| | | || ||||||| || ||||||||||||| |||||
Sbjct 184 GTGGAGAAACACTTCAAGAGGTACAGGAA-CGAGAACTATCTCTTCCCTGACACTATCGG 242
Query 131 CCAACACATCCATAACGTCGTT---GTTCACGAAGGCGAACATGACGCTCACGG-GTCTA 186
||| |||||||| || || ||| |||||||| |||||| ||| |||| || | | |
Sbjct 243 CCACCACATCCA-AA-GT-GTTACTGTTCACGATGGCGAATGGGACACTCAAGGAGGC-A 298
Query 187 TCAGGAGTTGGGACTACACA-TATGA--TGGAAAGAAGGAGACGTTCAAAGAGAAGAGAG 243
||| || |||| |||||||| | || ||||||| ||||| ||||| |||| |||||
Sbjct 299 TCAAGATTTGGAACTACACACTCGGAGATGGAAAGGAGGAGGTATTCAAGGAGAGGAGAG 358
Query 244 AGATAGATGACGAGAATAAAACATTGACGAAAAG-AGGACTGGAGGGTCACCCGATGGAG 302
||||||| || || ||||| | | ||| | | |||| |||| |||||| |||||||
Sbjct 359 AGATAGACGATGACAATAAGATAGTGAAGGTT-GTAGGATTGGAAGGTCACGTGATGGAG 417
Query 303 CACCTCAAAGTGTTTGATG-TC-ATTTACCAATTTATTCCCAAATCTGAGGATAGCT-GC 359
|| |||| |||| ||| | | | || ||||||||||||||| ||||| || || | ||
Sbjct 418 CAGTTCAAGGTGTATGA-GATTGACTT-CCAATTTATTCCCAACTCTGAAGA-AGATTGC 474
Query 360 GTCTGCAAACTCACTATGCTATGGGAGAAGCGCAACGATGACTTTCCC-GAACCAAGCGG 418
||||||||| |||||||| |||||||||||||||||||||| |||||| ||||||||| |
Sbjct 475 GTCTGCAAAATCACTATGATATGGGAGAAGCGCAACGATGA-TTTCCCCGAACCAAGCAG 533
Query 419 CTACATGAAATTCGTCAAGCAA-ATGGTTGTTGACATTGAAGG-CCACGTCAGCAAAGCT 476
||||||| || || ||||| | |||||| |||| || || || ||||||| ||||||
Sbjct 534 CTACATGCAACTCCTCAAG-AGTATGGTTATTGATATGGA-GGACCACGTCCTTAAAGCT 591
Query 477 TAA 479
|||
Sbjct 592 TAA 594
> AT2G01520.1 | Symbols: MLP328 | MLP-like protein 328 | chr2:235925-237147
FORWARD LENGTH=789
Length=789
Score = 233 bits (126), Expect = 1e-60
Identities = 327/423 (77%), Gaps = 18/423 (4%)
Strand=Plus/Plus
Query 24 ATGGCGACGTCGGGAACATACGTGACGGAGGTTCCATTGAAAGGATCGGCGGAGAAACAC 83
||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 68 ATGGCGACGTCAGGAACATATGTGACGGAGGTTCCATTGAAAGGATCGGCTGAGAAACAC 127
Query 84 TACAAGAGCTGGAAAAGCGAGAACCATGTCTTCCCTGACACCATCGGCCAACACATCCAT 143
|||||| | |||| || |||||||| ||||||| ||| |||||||||| ||||||||
Sbjct 128 TACAAGCGGTGGAGGAGTGAGAACCACCTCTTCCCCGACGCCATCGGCCACCACATCCA- 186
Query 144 AAC-GTCGTTGTTCACGAAGGCGAACATGACGCTCACGG-GTCTATCAGGAGTTGGGACT 201
| ||| | ||||| || ||| ||| | || || | | |||| || |||| |||
Sbjct 187 AGGTGTCACCATCCACGACGGTGAATGGGACTCCCATGGAGCC-ATCAAGATTTGGAACT 245
Query 202 ACACATATGATGG-AAAGAAGGAGACGTTCAAAGAGAAGAGAGAGATAGATGACGAGAAT 260
|||||| ||||| ||| |||| |||||| |||| |||||||||||| || ||||||
Sbjct 246 ACACATGCGATGGGAAACC-GGAGGTGTTCAAGGAGAGGAGAGAGATAGACGATGAGAAT 304
Query 261 AAAACATTGACGAAAAGAGGACTGGAGGGTCACCCGATGGAGCACCTCAAAGTGTTTGAT 320
| | | ||| |||||||| || |||||| ||||||||| || ||||||| |||
Sbjct 305 ATGGCGGTAACGTTCAGAGGACTCGAAGGTCACGTGATGGAGCAGCTTAAAGTGTATGAC 364
Query 321 GTCAT-TTACCAATTTATTCCCAAA-TC---TGAGGATAGCTGCGTCTGCAA-ACTCACT 374
||||| || | | || |||| ||| || ||| |||| | | |||| || | |||||
Sbjct 365 GTCATCTTTC-AGTTCATTCA-AAAGTCACCTGATGATA--T-CATCTGTAAGA-TCACT 418
Query 375 ATGCTATGGGAGAAGCGCAACGATGACTTTCCCGAACCAAGCGGCTACATGAAATTCGTC 434
||| | |||||||||| ||||||||| | || || || ||| ||||||||| ||||||
Sbjct 419 ATGATCTGGGAGAAGCAAAACGATGACATGCCTGAGCCCAGCAACTACATGAAGTTCGTC 478
Query 435 AAG 437
|||
Sbjct 479 AAG 481
> AT2G01530.1 | Symbols: MLP329 | MLP-like protein 329 | chr2:239705-240520
FORWARD LENGTH=737
Length=737
Score = 187 bits (101), Expect = 8e-47
Identities = 325/429 (76%), Gaps = 32/429 (7%)
Strand=Plus/Plus
Query 24 ATGGCGACGTCGGGAACATACGTGACGGAGGTTCCATTGAAAGGATCGGCGGAGAAACAC 83
|||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 111 ATGGCGACATCGGGAACATATGTGACGGAGGTTCCATTGAAAGGATCGGCGGATAAACAC 170
Query 84 TACAAGAGCTGGAAA-AGCGAGAACCATGTCTTCCCTGACACCATCGGCCAACACATCCA 142
|||||| | |||| | | |||||||| ||||||| || |||||||||| ||||||||
Sbjct 171 TACAAGCGGTGGAGAGAT-GAGAACCACCTCTTCCCCGATGCCATCGGCCACCACATCCA 229
Query 143 TAAC-GTCGTTGTTCACGAAGGCGAACATGACGCTCACGG-GTCTATCAGGAGTTGGGAC 200
| ||| ||| ||||| || ||| ||| |||| | | | |||| || |||| ||
Sbjct 230 -AGGTGTCACTGTCCACGACGGTGAATGGGACTCTCATGAAGCC-ATCAAGATTTGGAAC 287
Query 201 TACACATATGATGG-AAAGAAGGA-GACGTTCAAAGAGAAG-AGAGAGATAGATGACGAG 257
|| |||| ||||| ||| ||| | |||||| || ||| | ||||||||| || |||
Sbjct 288 TATACATGCGATGGGAAACC-GGAAGT-GTTCAAGGA-AAGGAAAGAGATAGACGATGAG 344
Query 258 AATAAAAC-ATTGACGAAAAGAGGACTGGAGGGTCACC-CGATGGAGCACCTCAAAGTGT 315
|||| || ||| |||||||| || |||||| | |||||||| || |||||||
Sbjct 345 AATATGGTGATA-ACGTTCAGAGGACTAGAAGGTCACGTC-ATGGAGCAGCTTAAAGTGT 402
Query 316 TTGATGTCATTTACCAATTTATTCCCAAA-TCT---GAGGATAGCTGCGTCTGCAA-ACT 370
|||| |||| || || || | || ||| ||| || |||| | ||| ||||| | |
Sbjct 403 ATGATCTCATATATCAGTTCAG-CCAAAAGTCTCCCGATGATA--T-CGTATGCAAGA-T 457
Query 371 CACTATGCTATGGGAGAAGCGCAAC-GATGACTTTC-CC-GAACCAAGCGGCTACATGAA 427
||| ||| | ||||||||||| ||| ||||| || | || || || ||| |||||||||
Sbjct 458 CACAATGATTTGGGAGAAGCG-AACCGATGA-TT-CGCCTGAGCCTAGCAACTACATGAA 514
Query 428 ATTCGTCAA 436
||| ||||
Sbjct 515 GTTCCTCAA 523
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 23810985678
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5