BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg945791
Length=1024
Score E
Sequences producing significant alignments: (Bits) Value
AT4G23230.1 | Symbols: CRK15 | cysteine-rich RLK (RECEPTOR-like... 1125 0.0
AT4G23140.2 | Symbols: CRK6 | cysteine-rich RLK (RECEPTOR-like ... 534 5e-151
AT4G23150.1 | Symbols: CRK7 | cysteine-rich RLK (RECEPTOR-like ... 532 2e-150
AT4G23310.1 | Symbols: CRK23 | cysteine-rich RLK (RECEPTOR-like... 268 6e-71
AT5G23510.2 | Symbols: | unknown protein; LOCATED IN: cellular... 102 6e-21
> AT4G23230.1 | Symbols: CRK15 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 15 | chr4:12157569-12160270 REVERSE LENGTH=2133
Length=2133
Score = 1125 bits (609), Expect = 0.0
Identities = 834/940 (89%), Gaps = 25/940 (3%)
Strand=Plus/Plus
Query 51 TTCCTTTTCTCCTTCCTCACTAGCTTCAGAGCTTCTGCTCAAAATATTTTCTACATACAG 110
|||||||||| ||||||||||||||||| |||||||| | ||||| ||||||| ||| ||
Sbjct 16 TTCCTTTTCTTCTTCCTCACTAGCTTCACAGCTTCTGTTGAAAATGTTTTCTATATAAAG 75
Query 111 CATATTTGTCCAAATACGACAACTTATTCACGAAACAGCACTTACTTCACTAATCTCAGA 170
|||||||| ||||||||||||||||||||| |||||||| ||||||| ||||||||||||
Sbjct 76 CATATTTGCCCAAATACGACAACTTATTCAAGAAACAGCCCTTACTTGACTAATCTCAGA 135
Query 171 ACCCTTTTGTCTTCTCTTTCTTCCCCCAACGCCTCTTACTCCACTGGATTCCAAAACGCC 230
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||
Sbjct 136 ACCCTTTTGTCTTCTCTTTCTGCCCCCAACGCCTCTTACTCTACTGGATTCCAAAGCGCC 195
Query 231 ACGGCGGGACAAGCCCCCGACAGAGTCACCGGACTTTTCCTTTGCCGCGGAGACGTCTCA 290
| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 196 AGGGCGGGACAAGCCCCTGATAGAGTCACCGGACTTTTCCTTTGCCGCGGAGACGTCTCA 255
Query 291 TCGGAAGTTTGTCGTAAGTGCGTCGCCATT-TCCATCAACGACACACTCACTCAGTGTCC 349
||| |||||||||||| ||||||||| || |||||||||||||||||| |||||||||
Sbjct 256 CCGGCAGTTTGTCGTAACTGCGTCGCC-TTCTCCATCAACGACACACTCGTTCAGTGTCC 314
Query 350 GAATGAGATGGAAG-CCGTGTTTTATTATGATGAGTGTATGCTCAGATATTCTGACCGGA 408
|| ||||| | || |||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct 315 GAGTGAGA-GAAAATCCGTGTTTTATTATGATGAGTGTATGCTCAGATACTCTGACCAGA 373
Query 409 ATATTCTCTCGACCCTTGCATACGATGGAGCATGGTTCAGGTTGAACGGTAATATTTCAA 468
||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||
Sbjct 374 ATATTCTCTCGACCCTTGCATACGATGGAGCATGGATCAGGATGAACGGAAATATTTCAA 433
Query 469 TTGATCAAAATCAAATGAACCGGTTCGGAGATTTGGTGTCGTCCACGATGAACCAAGCTG 528
|||||||||||||||||||||||||| |||||| |||||||| |||||||| |||||||
Sbjct 434 TTGATCAAAATCAAATGAACCGGTTCAAAGATTTTGTGTCGTCTACGATGAATCAAGCTG 493
Query 529 CCTTGGAAGCAGCGAGCAATGCTACAAAGTTCTATACGATAAAGGCCAATTGGACCGCAC 588
|| | |||| ||||||| | ||| ||||||||||||| ||||||||| |||||| ||||
Sbjct 494 CCGTCAAAGCGGCGAGCAGTCCTAGAAAGTTCTATACGGTAAAGGCCACTTGGACAGCAC 553
Query 589 TCCAGACTTTGTACGGCTTGGTTCAGTGCACTCCTGATCTTACAAGACATGACTGCTTGA 648
||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||| |
Sbjct 554 TCCAGACGTTGTACGGCCTGGTTCAGTGCACTCCTGATCTTACAAGACAAGACTGCTTCA 613
Query 649 GCTGTCTGGAAAGTTTCATCAA-TGTAATGCCTCTTTACAAAACTGGAGGAAGATTTCTT 707
||||||||||||||| |||||| | ||||||||||||||||||||||||||||| ||||
Sbjct 614 GCTGTCTGGAAAGTTCCATCAAAT-TAATGCCTCTTTACAAAACTGGAGGAAGAACTCTT 672
Query 708 TACCCTAGTTGTAATTTAAGGTACGAGCTATTCGCGTTCTATAACGAATCCGCTGTTAGA 767
||| |||||||||||| |||||||||||| ||||||||||| |||||| | ||||||||
Sbjct 673 TACTCTAGTTGTAATTCAAGGTACGAGCTTTTCGCGTTCTACAACGAAACTACTGTTAGA 732
Query 768 ACACAACCACAACAACAAGTACCACCACCACCGCTGCCTCCTGCATCTACTCCTCCGGTG 827
||||||| | | | | |||||||||||| |||||| | |||||||||| ||||
Sbjct 733 ACACAAC-A-A-------G--C-ACCACCACCGCTACCTCCTTCGTCTACTCCTCTGGTG 780
Query 828 TCACCTCCTCCACGACCTGGGAAAAGTTGGT-TCTCAAATGTGTTAGTGGTAGCAATTGG 886
|| ||||| ||| ||| |||||||||||| | ||||||||||||||||| |||||||
Sbjct 781 ACATCTCCTTCACTACCAGGGAAAAGTTGGAAT-TCAAATGTGTTAGTGGTTGCAATTGT 839
Query 887 TGTGACAATTATAGTGGCTGTTCTAATTTTGATAGCTGGTTACTGTTTCCTTGCAAAAAG 946
| |||| || | ||||||| |||| |||||||||||||||| ||||| | ||||||||
Sbjct 840 TCTGACCATCCTTGTGGCTGCTCTACTTTTGATAGCTGGTTATTGTTT--T-GCAAAAAG 896
Query 947 GGTAAAGA-TGTCTTCTGATACTGCACCAGCCTTTGATGG 985
||| |||| | |||||||||| ||||||||||||||||||
Sbjct 897 GGTTAAGAAT-TCTTCTGATAATGCACCAGCCTTTGATGG 935
> AT4G23140.2 | Symbols: CRK6 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 6 | chr4:12121383-12124205 FORWARD LENGTH=2225
Length=2225
Score = 534 bits (289), Expect = 5e-151
Identities = 762/980 (78%), Gaps = 73/980 (7%)
Strand=Plus/Plus
Query 36 TCTTTCATCTTCCTTTTCCTTTTCTCCTTCCTCACTAG---CTTCAGAGCTTCTGCTCAA 92
||||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||||
Sbjct 30 TCTTTCAACTTCCTTTTCCTTTTCTCATTCCTCACTAGCTCCTTCACAGCTTCTGCTCAA 89
Query 93 AAT-ATTTTCTACATACAGCA-TATTTGTCCAAATACGACAACTTATTCACGAAACAGCA 150
|| |||| ||| || | || || ||||||||||||||||||||| ||| | |||||||
Sbjct 90 GATCCTTTT-TACTTAAATCATTA-TTGTCCAAATACGACAACTTACTCAAGTAACAGCA 147
Query 151 CTTACTTCACTAATCTCAGAACCCTTTTGTCTTCTCTTTCTTCCCCCAACGCCTCTTACT 210
|||||| ||| |||||||||||||||||||| ||||| ||||| | |||||||||||||
Sbjct 148 CTTACTCCACCAATCTCAGAACCCTTTTGTCCTCTCTATCTTCACGTAACGCCTCTTACT 207
Query 211 CCACTGGATTCCAAAACGCCACGGCGGGACAAGCCCCCGACAGAGTCACCGGACTTTTCC 270
|||| ||||||||||||||||| || ||| ||||||||||||||||||||||||||||||
Sbjct 208 CCACCGGATTCCAAAACGCCACTGCAGGAAAAGCCCCCGACAGAGTCACCGGACTTTTCC 267
Query 271 TTTGCCGCGGAGACGTCTCATCGGAAGTTTGTCGTAAGTGCGTCGCCATTTCCATCAA-C 329
|||||||||||||||||||| |||||||||| ||||| ||||| ||| |||| |||| |
Sbjct 268 TTTGCCGCGGAGACGTCTCACCGGAAGTTTGCCGTAACTGCGTAGCCTTTTCTGTCAATC 327
Query 330 GACACACTCAC-TCAGTGTCCGAATG-A-GATGGAAGCCGTGTTTTATTATGATG-AGTG 385
| || || | || ||||| || | | || | ||||||||||||| || || | | ||
Sbjct 328 AA-AC-CTTAAATCTTTGTCCCAAGGTAAGA-G-AAGCCGTGTTTTACTACGA-GCAATG 382
Query 386 TATGCTCAGATATTCTGACCGGAATATTCTCTCGAC--CC-TTGCATACGATGGAGCATG 442
||| |||||||||||| || ||||||||| ||||| || || || |||| |||| ||
Sbjct 383 TATACTCAGATATTCTCACAAGAATATTCTATCGACGGCCATTACAAACGAAGGAGAAT- 441
Query 443 GTTCAGGTTGA--A-CGGTAA---TATTTCAATTGATCAAAATCAAAT-GAACCGGTTCG 495
|| | |||| | | || |||||| | ||||||| ||||| || | |||||
Sbjct 442 -TT-ATCTTGAGTAACACCAACACTATTTCTCCTAATCAAAAACAAATAGA-CGGGTTCA 498
Query 496 GA-GATTTGGTGTCGTCCACGATGAACCAAGCTGCCTTGG-AA-GCAGCGAGCAATGCTA 552
| | |||| | || |||||||||| |||||||| || || ||||| | || | |||
Sbjct 499 CAAGTTTTGTT-TCCTCCACGATGAGTGAAGCTGCC--GGTAAAGCAGCCAACAGTTCTA 555
Query 553 CAAAGTTCTATACGATAAAGGCC-AATTGGACCGCACT-CCAGACTTTGTACGG-CTTGG 609
||| || |||||| | || || ||||| |||||| | ||||| ||||||||| || |
Sbjct 556 GAAAATTATATACGGTGAATACCGAATTG-ACCGCA-TACCAGAATTTGTACGGGCT-GC 612
Query 610 TTCAGTGCACTCCTGATCTTACAAGA-CATGACTGCTTGAGCTGTCTGGAAAGTTTCATC 668
|||||||||||||||||||||||||| || ||||||||||| ||| || |||||| ||||
Sbjct 613 TTCAGTGCACTCCTGATCTTACAAGAGCA-GACTGCTTGAGTTGTTTGCAAAGTTCCATC 671
Query 669 AATGTAATGCCTCTTTACAAAACT-GGAGGAAGA-TTT-CTTTACCCTAGTTGTAATTTA 725
|||| |||| |||||| || || | |||| |||| ||| || || ||||||| | |
Sbjct 672 AATGGAATGGCTCTTTCCAGAA-TAGGAGCAAGACTTTACTGG-CCG-AGTTGTACTGCA 728
Query 726 AGGTACGAGCTATT-CGCGTTCTATAACGAATCCGCTGTTAGAA-CACAACCACAAC-A- 781
||||||||||| || | ||||||| || ||| ||| || ||| ||| ||||| || |
Sbjct 729 AGGTACGAGCT-TTACCCGTTCTACAATGAAAGCGCCATT-GAAACACCACCACTACCAC 786
Query 782 -AC-A--AGTACCACCACCACCGCTGCC-TCCT-GCA-TCTACTCCTCCGGTGTCACCTC 834
|| | | ||||||||||||| | || | | |||||||||||| | ||| ||
Sbjct 787 CACCACCACCACCACCACCACCGAGGGAGTCGTTGGTGTCTACTCCTCCGATATCATCTT 846
Query 835 CTCCACGACCTGGGAAAAGTTGGTTCTCAA-ATGTGTTAGTGGTAGCAATTGGTGTGACA 893
|| || ||||||||||||| || ||||| | |||||||||||||| ||| |||| |
Sbjct 847 CTTCATTACCTGGGAAAAGTGGGAACTCAACA-GTGTTAGTGGTAGCCGTTGTTGTG-CT 904
Query 894 AT-TATAGTGGCTGTTC-TAATTTTGATAGCTGGTTACTGTTTCCTTGCAAAAAGGGTAA 951
| | || || ||| || ||| | | |||||| |||||||||||||||| | ||
Sbjct 905 GGCTGTTCTG-CTTTTCATAGCTTT-A--GTTGGTTATTGTTTCCTTGCAAAAAAGAAAA 960
Query 952 AGATGTCTTCTGATACTGCA 971
||| | ||| ||| || |||
Sbjct 961 AGAAGACTTTTGACACAGCA 980
> AT4G23150.1 | Symbols: CRK7 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 7 | chr4:12125731-12128332 FORWARD LENGTH=2011
Length=2011
Score = 532 bits (288), Expect = 2e-150
Identities = 617/769 (80%), Gaps = 50/769 (7%)
Strand=Plus/Plus
Query 37 CTTTCATCTTCCTTTTCCTTTTCTCCTTCCTCACTAGCTTCAGAGCTTCTGCTCAAAATA 96
||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct 17 CTTTCATATTCCTTTTCCTTTTCTCATTCCTCACTAGCTTCAGAGCTTCTGCTCAAGATC 76
Query 97 -T--TTTCTACATACAGCATATT-T-GTCCAAATACGACAACTTATTCACGAAACAGCAC 151
| |||| | || || |||| | |||||||| | |||||||| ||| | ||||||||
Sbjct 77 CTCGTTTC--C-TA--GCCTATTATTGTCCAAATGCAACAACTTACTCAAGTAACAGCAC 131
Query 152 TTACTTCACTAATCTCAGAACCCTTTTGTCTTCTCTTTCTTCCCCCAACGCCTCTTACTC 211
|||||| || ||||| | |||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 132 TTACTTGACCAATCTTAAAACCCTTTTGTCCTCTCTCTCTTCCCGCAACGCCTCTTACTC 191
Query 212 CACTGGATTCCAAAACGCCACGGCGGGACAAGCCCCCGACAGAGTCACCGGACTTTTCCT 271
||| ||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct 192 CACCGGATTCCAAAACGCCACGGTGGGACAAGCCCTTGACAGGGTCACCGGACTTTTCCT 251
Query 272 TTGCCGCGGAGACGTCTCATCGGAAGTTTGTCGTAAGTGCGTCGCCATTT-CCATCAACG 330
|||||| ||||||||||| |||||||||| ||||| |||||| || ||| || |||||
Sbjct 252 TTGCCGGGGAGACGTCTCGCCGGAAGTTTGCCGTAACTGCGTCACC-TTTGCCGTCAACA 310
Query 331 ACACACTC-ACTCAG-TGTCCGAATGAGATG-GAAGCCGTGTTTTATTATGATGAGTGTA 387
|||| || | | || ||||||||| ||| | ||||| ||||| ||||| || ||||| |
Sbjct 311 ACAC-CTTTAGT-AGGTGTCCGAATCAGA-GAGAAGCTGTGTTCTATTACGAGGAGTGCA 367
Query 388 TGCTCAGATATTCTGACCGGAATATTCTCTCGAC--CC-TTGCATACGATGGAGCATGGT 444
| |||||||| ||| || ||||||||| ||||| || || || |||| |||| || |
Sbjct 368 TACTCAGATACTCTCACAAGAATATTCTATCGACGGCCATTACAAACGAAGGAGAATT-T 426
Query 445 -TCAGGTTGAACGGTAAT-AT-TT-CAATTGAT-CAAAATCAAATGAACCGGTT--CGGA 497
|| | |||| ||| || || | | || ||||||||||| |||| ||| | |
Sbjct 427 ATCTTGAGGAACCCCAATCATATTTCTCCT-ATTCAAAATCAAATAAACCAGTTTACT-A 484
Query 498 GATTTGGTGTCGTCCACGATGAACCAAGCTGCCTTGGAAGCAGC-GAGCAATGCTACAAA 556
||||||||| || | ||||||||| |||| | |||||||| || |||| ||| |||
Sbjct 485 -ATTTGGTGTTATCTAATATGAACCAAATTGCCATCGAAGCAGCCGA-CAATCCTAGAAA 542
Query 557 GTTCTATACGATAAAGGCC-AATTGGACCGCACTCCAGACTTTGTACGG-CTTGGTTCAG 614
|||| |||||||||| || ||||| ||||||||||||||||| ||||| |||| ||||
Sbjct 543 ATTCTCTACGATAAAGACCGAATTG-ACCGCACTCCAGACTTTCTACGGGCTTG-TTCAA 600
Query 615 TGCACTCCTGATCTTACAAGACATGACTGCTTGAGCTGTCTGGA-AAGTTTCATCAAT-G 672
||||||||||||||| ||||||| ||||| ||| ||||||| | ||||| ||||||| |
Sbjct 601 TGCACTCCTGATCTTTCAAGACAAAACTGCATGAACTGTCTG-ACAAGTTCCATCAATAG 659
Query 673 TAATGCC-TCTTTACAA-AACTGGAGGAAGATT-TCTTTACCCTAGTTGTAATTTAAGGT 729
|||||| | ||| | | || ||||| |||| | ||| || |||||||||| |||||
Sbjct 660 -AATGCCAT-TTT-CTAGAATTGGAGCAAGACAGT-TTTGGCCAAGTTGTAATTCAAGGT 715
Query 730 ACGAGCTATT-CGCGTTCTATAACGAATCCGCTGTTAGAACACAACCAC 777
||||||| || || ||||| |||||| |||| || | |||| |||||
Sbjct 716 ACGAGCT-TTACGATTTCTACAACGAAACCGCCATTGGTACACCACCAC 763
> AT4G23310.1 | Symbols: CRK23 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 23 | chr4:12185737-12188763 FORWARD LENGTH=2493
Length=2493
Score = 268 bits (145), Expect = 6e-71
Identities = 505/670 (75%), Gaps = 59/670 (9%)
Strand=Plus/Plus
Query 130 CAACTTATTCAC-GAAACAGCACTTACTTCACTAATCTCAGAACCCTTTTGTCTTCTCTT 188
|||||| ||| | ||| |||||||||| | |||||||||| ||||||||||||| ||||
Sbjct 449 CAACTT-TTCCCAGAAGCAGCACTTACATGACTAATCTCATAACCCTTTTGTCTACTCTC 507
Query 189 TCTTCCCCCAACGCCTCTTACTCCACTGGATTCCAAAACGCCACGGCGGGACAAGC-CCC 247
||||||||| |||||| ||||||||||||||||||||||||||||| ||| || | |||
Sbjct 508 TCTTCCCCCTCCGCCTCATACTCCACTGGATTCCAAAACGCCACGGCAGGAAAA-CACCC 566
Query 248 CGACAGAGTCACCGGACTTTTCCTTTGCCGCGGAGACGTCTCATCGGAAGTTTGTCGTA- 306
|||||| || || ||||||||| |||||| ||||| |||||| |||||||||| ||||
Sbjct 567 CGACAGGGTAACAGGACTTTTCAATTGCCGTGGAGATGTCTCACCGGAAGTTTGCCGTAG 626
Query 307 AGTGCGTCGCCATTT-CCATCAACGACACACTCA-CTCAGTGTCCGAAT-GAGATGGAAG 363
| |||||| | ||| || ||||||| || |||| ||| |||||| | | |||| ||||
Sbjct 627 A-TGCGTCTCT-TTTGCCGTCAACGAAAC-CTCAACTCGGTGTCCTA-TCGAGAAAGAAG 682
Query 364 CCGTGTTTTATTATGATGAGTGTATGCTCAGATATTCTGACCGGAATATTCTCTCGACCC 423
| | ||||| ||| |||||| |||||||| ||| |||||||||| ||||| ||
Sbjct 683 TCACACTCTATTACGATCAGTGTACACTCAGATACTCTAACCGGAATATCCTCTCAAC-- 740
Query 424 TTGC-A-TACGA-TGGAGCA-TGGT-TCAGGTTGAACGGT-A-A-TATTTCAAT-TGATC 474
|| | | ||| | ||||| | | | | || | ||| || | | ||| || | | | |
Sbjct 741 TT-CTAATACCAATGGAGGAATTATCTT-GGCT-AACAGTCAGAATATGACA-TCTAA-C 795
Query 475 AAAATCAAATGAACCGGTTCGGAGATTTGGTGTCGTCCACGATGAACCAAGCTGCCTTGG 534
|| ||| | ||||||| ||||||||| | |||||||||||||||| || | |
Sbjct 796 GAA--CAA--GC-CCGGTTCAAAGATTTGGTTTTAACCACGATGAACCAAGCCACCATCG 850
Query 535 AAGCAGCGAGCAATGCTACAAAG-TTCTATACGATAAAG-GCCAATTGGACCGCAC-TC- 590
||| || | || | | | |||| ||| | ||| || | ||||||| || | || |
Sbjct 851 CAGCTGCCAACAGTTCCA-AAAGATTCGACGCGAGAA-GTGCCAATTTTAC-G-ACGTTG 906
Query 591 CAGACTTTGTACGG-CTTGGTTCAGTGCACTCCTGATCTTACAAGACATGACTGCTTGAG 649
|| | ||||||| || |||||||||||||| ||||||||||||||| ||||| |||||
Sbjct 907 CATAGTTTGTACACACT-GGTTCAGTGCACTCATGATCTTACAAGACAAGACTGTTTGAG 965
Query 650 CTGTCTGGAA-AGTTTCATCAATGTAATG-CCT-CTTTACAAAACTGGAGGA-AGATTTC 705
|||||| || || | ||||||| ||| || || | |||| ||| ||| | ||||
Sbjct 966 TTGTCTGCAACAGAT-CATCAATC-AATTACCCACTGAA-AAAATTGGGGGACA-ATTTA 1021
Query 706 TT-TACCCTAGTTGTAATTTAAGGTACGAGCTATTCGC--GTTCTATAA-CGAATCCGCT 761
|| |||| || |||| || ||| | |||||| || || |||||| || | |||||||
Sbjct 1022 TTGTACCG-AGCTGTAGTTCAAGATTCGAGCT-TT-GCCTGTTCTACAATC-AATCCGCC 1077
Query 762 GTTAGAACAC 771
|||| |||||
Sbjct 1078 GTTACAACAC 1087
> AT5G23510.2 | Symbols: | unknown protein; LOCATED IN: cellular_component
unknown; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G23490.1); Has 30201 Blast hits
to 17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:7926945-7929338
FORWARD LENGTH=1252
Length=1252
Score = 102 bits (55), Expect = 6e-21
Identities = 68/74 (92%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 21 ATGACTTCTTGCGCCTCTTT-CATCTTCCTTTTCCTTTTCTCCTTCCTCACTAGCTTCAG 79
||| ||||| |||||||||| ||| ||||||||||||| ||| |||||||||||||||||
Sbjct 1100 ATGTCTTCTCGCGCCTCTTTACATATTCCTTTTCCTTTACTCTTTCCTCACTAGCTTCAG 1041
Query 80 AGCTTCTGCTCAAA 93
||||||||||||||
Sbjct 1040 AGCTTCTGCTCAAA 1027
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 50183912853
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5