BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg945815
Length=751
Score E
Sequences producing significant alignments: (Bits) Value
AT3G09970.1 | Symbols: | Calcineurin-like metallo-phosphoester... 699 0.0
AT3G09960.1 | Symbols: | Calcineurin-like metallo-phosphoester... 457 8e-128
AT5G18670.1 | Symbols: BMY3, BAM9 | beta-amylase 3 | chr5:62259... 302 4e-81
> AT3G09970.1 | Symbols: | Calcineurin-like metallo-phosphoesterase
superfamily protein | chr3:3063774-3065575 FORWARD LENGTH=1207
Length=1207
Score = 699 bits (378), Expect = 0.0
Identities = 443/474 (93%), Gaps = 5/474 (1%)
Strand=Plus/Plus
Query 20 AATGGCGCAAAAACCACGAACGGTGATCTGCGTCGGAGACATCCATGGATACATATCGAA 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 39 AATGGCGCAAAAACCACGAACGGTGATCTGCGTCGGAGACATCCATGGATACATATCAAA 98
Query 80 GCTCAATAACCTCTGGCTTAATCTCCAATCCGCCATCGACCCATCAGAATTCAGCTCAGC 139
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 99 GCTCAATAACCTCTGGCTTAATCTCCAATCTGCCATCGACCCATCAGATTTCAGCTCAGC 158
Query 140 TCTCGTCATCTTCCTCGGCGATTACTGCGATCGTGGACCAGAGAC-CGGAAAAGTCATCG 198
||||||||| ||||| ||||||||||||||||||||||| ||||| || |||||||||||
Sbjct 159 TCTCGTCATATTCCTTGGCGATTACTGCGATCGTGGACCGGAGACTCG-AAAAGTCATCG 217
Query 199 ATTTCTTAATCTCTCTACCGGAGAAACATCCCGATCAAACTCACGTCTTTCTCGCCGGGA 258
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 218 ATTTCTTAATCTCTCTGCCGGAGAAACATCCCGATCAAACTCATGTCTTTCTCGCCGGGA 277
Query 259 ACCACGACTTCGCCTTCTCTGGGTTCTTGGGTTTGTTGCCCCGTCCTTCAGATGGGTCTG 318
|||| ||||| ||||||||||||||||| ||||||||||| |||||||||||||| ||||
Sbjct 278 ACCATGACTTTGCCTTCTCTGGGTTCTTAGGTTTGTTGCCTCGTCCTTCAGATGGATCTG 337
Query 319 ATTTGAAGGATACGTGGAAGGAGTACG-AGGGTAGCGAGGAGAGAGAAGGATGGTATAGA 377
|||||||||||||||||||||||||| | || ||||||| |||||||||||||| |
Sbjct 338 ATTTGAAGGATACGTGGAAGGAGTACTCAAAA-AGTGAGGAGACAGAAGGATGGTATACA 396
Query 378 GGTGAAGGGTTCGAGGATATGCATCTTCAAGGTAGGAGATGGGCTGGTAAAATTAAGGTT 437
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 397 GGTGAAGGGTTCGAAGATATGCATCTTCAAGGTAGAAGATGGGCTGGTAAAATTAAGGCT 456
Query 438 ACGTTCAATTCTGTGAAAGGCATGGCTTATAAGGGTTCGATTTACGAT-CTGGA 490
|||||||||||||||||||| ||||||||||| || |||||||||||| |||||
Sbjct 457 ACGTTCAATTCTGTGAAAGGGATGGCTTATAAAGGATCGATTTACGATGCTGGA 510
> AT3G09960.1 | Symbols: | Calcineurin-like metallo-phosphoesterase
superfamily protein | chr3:3061952-3063594 FORWARD LENGTH=1113
Length=1113
Score = 457 bits (247), Expect = 8e-128
Identities = 370/428 (86%), Gaps = 14/428 (3%)
Strand=Plus/Plus
Query 27 CAAAAACCACGAACGGTGATCTGCGTCGGAGACATCCATGGATACATATCGAAGCTCAAT 86
|||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 48 CAAAAACCACGAACTGTGATCTGCGTCGGAGACATCCATGGAAACATATCAAAGCTCAAT 107
Query 87 AACCTCTGGCTTAATCTCCAATCCGCCAT-CGACCCATCAGAATTCAGCTCAGCTCTCGT 145
|| |||||||||||||| ||||||| || | | | ||||| |||||||||||||||||
Sbjct 108 AAACTCTGGCTTAATCTTCAATCCGATATCCAAAAC-TCAGATTTCAGCTCAGCTCTCGT 166
Query 146 CATCTTCCTCGGCGATTACTGCGATCGTGGACCAGAGAC-CGGAAAAGTCATCGATTTCT 204
||||||||||||||| ||||||||||||||||| ||||| || |||||||||||| ||||
Sbjct 167 CATCTTCCTCGGCGACTACTGCGATCGTGGACCGGAGACTCG-AAAAGTCATCGACTTCT 225
Query 205 TAATCTCTCTACCGGAGAAACATCCCGATCAAACTCACGTCTTTCTCGCCGGGAACCACG 264
| |||||| | |||||||||||||||||||| || || |||||||| ||||| |||||||
Sbjct 226 TGATCTCTTTGCCGGAGAAACATCCCGATCAGACCCATGTCTTTCTTGCCGGAAACCACG 285
Query 265 ACTTCGCCTTCT-CTGGGTTCTTGGGTTTGTTGCCCCGTCCTTCAGATGGGTCTGA-TTT 322
|||| || || | |||| |||||||||||||| || || ||||||||||||||||| |||
Sbjct 286 ACTTTGCTTT-TGCTGGCTTCTTGGGTTTGTTACCTCGCCCTTCAGATGGGTCTGAGTTT 344
Query 323 GAAGGATACGTGGAAGGAGTACG-AGGGTAGCGAGGAGAGAGAAGGATGGTATAGAGGTG 381
||||| |||||||| |||||| | || |||||||||||||||||||||| |||||
Sbjct 345 -AAGGAAACGTGGAAAGAGTACTCAAAA-AGTGAGGAGAGAGAAGGATGGTATAAAGGTG 402
Query 382 AAGGGTTCGAGGATATGCATCTTCAAGGTAGGAGATGGGCTGGTAAA-ATTAAGGTT-AC 439
||||||| ||| |||||||||| ||| | ||||||||||| || ||| |||| |||| |
Sbjct 403 AAGGGTTTGAGAATATGCATCTCCAAAGCAGGAGATGGGCGGG-AAAGATTAGGGTTCA- 460
Query 440 GTTCAATT 447
|||| |||
Sbjct 461 GTTCGATT 468
> AT5G18670.1 | Symbols: BMY3, BAM9 | beta-amylase 3 | chr5:6225956-6228132
FORWARD LENGTH=1926
Length=1926
Score = 302 bits (163), Expect = 4e-81
Identities = 191/205 (93%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 489 GAGAGTGTAAAATTATTCGTTGGGCTTCCACTGGACACAGTTTCAGACTGCAACAACGTG 548
||||||||||||||||| ||||||||||| | ||||||||||||||||||||||| |||
Sbjct 435 GAGAGTGTAAAATTATTTGTTGGGCTTCCGTTAGACACAGTTTCAGACTGCAACAATGTG 494
Query 549 AACCACTTGAAAGCTATCACAGCTGGGCTTAAAGCTTTGAAGCTACTTGGTGTTGAAGGC 608
|| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 495 AATCACTTGAAAGCTATTACAGCTGGGCTTAAAGCTTTGAAGCTACTTGGTGTAGAAGGT 554
Query 609 ATTGAGTTACCAATCTTTTGGGGAGTTGTTGAGAAAGAAGCTGCAGGGAAATATAAATGG 668
||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct 555 ATTGAGTTACCTATCTTTTGGGGAGTTGTTGAGAAAGAAGCTGCTGGGAAATATGAATGG 614
Query 669 TCAAGGTACTTGGCAGTAGCTGAGA 693
|| |||||||||||||||||||||
Sbjct 615 TCTGGGTACTTGGCAGTAGCTGAGA 639
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 36469990722
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5