BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg945829 Length=1069 Score E Sequences producing significant alignments: (Bits) Value AT4G22900.1 | Symbols: | Protein of unknown function (DUF1191)... 1628 0.0 AT4G11950.1 | Symbols: | Protein of unknown function (DUF1191)... 507 1e-142 > AT4G22900.1 | Symbols: | Protein of unknown function (DUF1191) | chr4:12010177-12011356 FORWARD LENGTH=1180 Length=1180 Score = 1628 bits (881), Expect = 0.0 Identities = 1019/1082 (94%), Gaps = 23/1082 (2%) Strand=Plus/Plus Query 1 TAGATTCTCTTGATCCTCTCATGGATTCATTCTCTTTTTGTATCATCATC---ATACTTC 57 |||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||| Sbjct 25 TAGATTCTCTTGTTCCTCTTATGGATTCATTCTCTTTTTGTATCATCATCATGATACTTC 84 Query 58 TCTTATTATCATTCCACCAATCTGAGTCTCAATCGATTCAATCTACACATCTCCTTGATC 117 || |||||||||||||||||| ||||||||| |||||||||||||||||| ||||||| Sbjct 85 TC---TTATCATTCCACCAATCTAAGTCTCAATTGATTCAATCTACACATCTTCTTGATC 141 Query 118 TCATGATTAGAGATTACACCATTAGAAACTTTAAGCTCAATCTCAACACAGGCATCACTC 177 ||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct 142 TCATGATCAGAGATTACACCATTAGAAACTTTAAGCTCAATTTCAACACAGGCGTCACTC 201 Query 178 AGAAAATCCATCTCCCTTCTAATTTCTCTGGTATCGACATTGACACGGTCAAGTTAAGGT 237 |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 202 AGAAAATCTATCTCCCTTCTAATTTCTCTGGTATCGATATTGACACGGTCAAGTTAAGGT 261 Query 238 GTGGGAGTTTGAGAAGATATGGAGCAAAAATTGGAGAGTTTCACATCGGTTCAGGCGTTA 297 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct 262 GTGGGAGTTTGAGAAGATATGGCGCAAAAATTGGAGAGTTTCACATCGGTTCAGGCCTTA 321 Query 298 CGGTGGAGCCATGTCCGGAGAGAGTCATGCTAATTAGACAAAACCTTGGTTTGAATTGGT 357 |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct 322 CGGTGGAGCCATGTCCGGAGAGAGTCATGCTAATTAGACAAAACTTTGGTTCGAATTGGT 381 Query 358 CCTCAATCTACTCTACTGGTTATAACTTATCCGGCTACAATTACAAGCTCGTGTCACCGG 417 | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 382 CTTCAATCTACTCTACTGGTTATAACTTATCCGGTTACAATTACAAGCTCGTGTCACCGG 441 Query 418 TTCTTGGTTTATTGGCTTATAATGCTAACCCTGACGGTGTGGCCACGAATCCTTATGAGG 477 |||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||| Sbjct 442 TTCTTGGTTTGTTGGCTTATAATGCTAACCCTGACGGTGTGGCCAGGAACCCTTACGAGG 501 Query 478 TTAACGTTGTAGGTACCGATCAAAACCCAATTTTAGTCGATTTCTTGAGCAACAAGGCAA 537 |||| |||||||||||||||||||||||||| ||| |||||||||||| ||||||||||| Sbjct 502 TTAATGTTGTAGGTACCGATCAAAACCCAATCTTAATCGATTTCTTGATCAACAAGGCAA 561 Query 538 CTAATAACACTAGCCCTAACCCTACGACGACGAAGAAGAACTCGTCAGTCTTGTGTGCGT 597 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 562 CTAATAACACTAGCCCTAACCCT------ACGAAGAAGAACTCGTCAGTCTTGTGTGCGT 615 Query 598 GTTTTACAAGTAAC-GCTAACACAACGTTTAGTGAGCAAGTCTCGCCGTATGTATGTAAA 656 |||||||||| ||| | ||||||||||||||| |||||||||||||||||||| |||||| Sbjct 616 GTTTTACAAGCAACAG-TAACACAACGTTTAGCGAGCAAGTCTCGCCGTATGTGTGTAAA 674 Query 657 GGGACAAGACAAGGGCATTACGCTCTCGTGATGAAGACAGAAGCTCAAAAAGATGATCAT 716 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 675 GGTACAAGACAAGGGCATTACGCTCTCGTGATGAAGACAGAAGCTCAAAAAGATGATCAT 734 Query 717 G-A--CGGTGGT-G--GTGGTGGAGTGGTGACGTCATCGACGGAGATGAATGGTGGCAAC 770 | | |||||| | |||||||||||||| | |||||||||||| |||||||||||||| Sbjct 735 GAAGGTGGTGGTAGTAGTGGTGGAGTGGTGGCATCATCGACGGAGGTGAATGGTGGCAAC 794 Query 771 GGAGGAGGAAAGTTGAGCCGGTGGAAAGTGGCGGTGGGGAGTGTGATTGGGTCAGGGATT 830 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 795 GGAGGAGGAAAGTTGAGCCGTTGGAAAGTGGCGGTGGGGAGTGTGATAGGGTCAGGGATT 854 Query 831 GGAGCAATTCTGCTGGGAATGTTAGTGGTGGCGATGCTGGtgaaggtgaagaagaaagca 890 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct 855 GGAGCAATTCTGCTGGGAATGTTAGTGGTGGCGATGTTGGTGAAGGGGAAGAAGAAAGCA 914 Query 891 atgagagaagaaatagagagaagagcttatgaagaagaagCTCTTCAGGTTTCAATGGTG 950 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 915 ATGAGAGAAGAAATGGAGAGAAGAGCTTATGAAGAAGAAGCTCTTCAGGTGTCAATGGTG 974 Query 951 GGTCATGTTAGAGCTCCTACTGCTCCTGGAACTAGAACTCTTCCTAGAATTGCCGATGAT 1010 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 975 GGTCATGTTAGAGCTCCTACTGCTCCTGGAACTAGAACTCTTCCTAGAATTTCCGATGAT 1034 Query 1011 AGGTATAA-AAA--CACTCATATGAATAGTAATTATCCATAATTATCATTTGTTTTCTGA 1067 |||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1035 AGGTATAATAAAAACACTCATTTGAATAGTAATTATCCATAATTATCATTTGTTTTCTGA 1094 Query 1068 TT 1069 || Sbjct 1095 TT 1096 > AT4G11950.1 | Symbols: | Protein of unknown function (DUF1191) | chr4:7173276-7174259 REVERSE LENGTH=984 Length=984 Score = 507 bits (274), Expect = 1e-142 Identities = 775/1007 (77%), Gaps = 73/1007 (7%) Strand=Plus/Plus Query 41 TATCATCATCATACTTCTCTTATTATCAT-TCCACCAATCTGAGTCTCA-ATCGATTCAA 98 |||| ||||||| | | |||| || |||| | || |||| | ||||| | | ||| || Sbjct 18 TATCTTCATCAT-CCT-TCTT-TT-TCATGTACATAAATCCAAATCTCAGA-CCATTGAA 72 Query 99 TCTA-CACATCTCCTTGATCTCATGATTAGAGATTACACCATTAGAAACTTTAAGC-TCA 156 || | ||||| | |||||||| ||||| ||||||||||||||||||||||| || | | | Sbjct 73 TC-AGCACATTTTCTTGATCTTATGATCAGAGATTACACCATTAGAAACTTCAA-CAT-A 129 Query 157 -ATCTCAACACA-G-GCATCACT-CAGAAAATCCATCTCCCTTCTAATTTCT-CTGGTAT 211 || |||| ||| | || | | | |||||| ||||||| ||||| ||||||| || || Sbjct 130 CATTTCAAGACAGGTGC-T-A-TCCAGAAAGTCCATCTTCCTTCGAATTTCTCCT-CCAT 185 Query 212 CGACATTGACAC-GGTCAAGTTAAGGTGTGGGAGTTTGAGAAGATATGGAGCAAAAATTG 270 || || | ||| | | ||||| || |||||||||||||||||| | || |||| ||||| Sbjct 186 TGATATCGCCACAGCT-AAGTTTAGATGTGGGAGTTTGAGAAGACACGGTGCAAGAATTG 244 Query 271 GAGAGTTTCACATCGGTTCAGGCGTT-ACGGTGGAGCCATGTCCGGAGAGAGTCATGCTA 329 ||||||||||| | ||| | ||| || || |||||||||||| |||||||| || || Sbjct 245 GAGAGTTTCACTTAGGTCCGGGC-TTGACCGTGGAGCCATGTGTTGAGAGAGTGATCCTG 303 Query 330 ATTAGACAAAACCTT--GGTTTGAATTGGTC--CTCA-ATCTACTCTACTGGTTATAACT 384 | ||||| || ||| ||||| || ||||| || | || ||||| || |||||||||| Sbjct 304 GTGAGACAGAA-CTTGGGGTTT-AACTGGTCTTCTTATATTTACTCAACCGGTTATAACT 361 Query 385 TATCCGGCTACAATTACAAGCTCGTGTCACCGGTTCTTGGTTTATTGGCTTATAATGCTA 444 || |||| ||||| ||| ||| ||||| || |||||||||||||||||||| ||| | | Sbjct 362 TAACCGGTTACAAATACCGGCTTGTGTCTCCTGTTCTTGGTTTATTGGCTTACAATTCAA 421 Query 445 ACCCTGACGGTGTGGCCACGAATCCTTATGAGGTTAACGTTGTAGGTACCGATCAAAACC 504 | || |||||||| || ||||||||||||||||||||| | || || || ||||||| Sbjct 422 ATCCGGACGGTGTTGCTGTGAATCCTTATGAGGTTAACGTAATGGGCACGGAACAAAACC 481 Query 505 CAATTTTAG-TCGATTTCTTGAGCAACAAGGCAACTAATAACACTAGCCCTAACCCTACG 563 | ||||| | || | ||||| |||| |||| | | | ||||||||| |||| Sbjct 482 CTATTTT-GATCAAATTCTTAAGCAGTGAGGC-A--AGT---GGTAGCCCTAAACCTA-- 532 Query 564 ACGACGAAGAAGAACTCGTCAGTCTTGTGTGCGTGTTTTACAAGTAACGCTAACACAACG 623 || |||||||||||||| || ||||||||||| || || |||||||||| ||||| |||| Sbjct 533 AC-ACGAAGAAGAACTCATCTGTCTTGTGTGCTTGCTTCACAAGTAACGGTAACATAACG 591 Query 624 TTTAGTGAGCAAGTCTC-GCCGTATGTATGTAAAGGG-ACAAGACAAGGGCATTACGCTC 681 ||||| |||||||| || | | ||||| || ||| |||||||||||||||||||| | Sbjct 592 TTTAGAGAGCAAGTTTCAG-CTTATGTTTG-CTTGGGAACAAGACAAGGGCATTACGCGC 649 Query 682 TCGTGATGAAGACAGAAGCTCA-AAAAGATGATC-ATGACGGTGGTGGTGGTGG-AGTGG 738 | || || | || |||||| | || || | || |||| || ||||| | Sbjct 650 T--TG-TG-A-TTAG-AGCTCATGATAG-TG-GCGGTGGCGGTAGT-ACGGTGGTAACAC 700 Query 739 TGACGTCATCGACGGAGATGAATGGTGGCAACGGAGGAGGAAAGTTGAGCCGGTGGAAAG 798 | ||||||| ||| ||| || || |||| | ||||| |||||||||||||||| Sbjct 701 CGTCGTCATCTCCGGCTTTGACTGACGGTGGCGGA-G-GGAAA-TTGAGCCGGTGGAAAG 757 Query 799 TGGCGGTGGGGAGTGTGATTGGGTCAGGGATTGGAGCAATTCTGCT-GGGAATGTTAGTG 857 ||||||| ||||||||||| || ||| |||||||| ||||| | ||| | || ||| Sbjct 758 TGGCGGTTGGGAGTGTGATAGGTTCAATAATTGGAGCGTTTCTGTTAGGG-TTATTGGTG 816 Query 858 GTGGCGATGCTGGtg-aaggtgaagaagaaagcaatgagagaagaaatagagagaagagc 916 ||||||||| | ||| |||| |||||||||||| |||||||| || || ||||| ||||| Sbjct 817 GTGGCGATGGTAGTGAAAGG-GAAGAAGAAAGCGATGAGAGAGGAGATGGAGAGGAGAGC 875 Query 917 ttatgaagaagaagCTCTTCAGGTTTCAATGGTGGGTCATGTTAGAGCT---CCTACTGC 973 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| Sbjct 876 TTATGAAGAAGAAGCACTTCAGGTTTCAATGGTGGGTCATGTTAGAGCTAATCCTAATGC 935 Query 974 TCCTG-GAACTAGAACTCTTCCTAGAATTGCCGATGA-TAGGTATAA 1018 | | | || | ||||| |||| ||| ||| || | ||||||||| Sbjct 936 TTC-GAGATCAAGAACGATTCCAAGATTTGAAAAT-ACTAGGTATAA 980 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 52359168435 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5