BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg945854 Length=1105 Score E Sequences producing significant alignments: (Bits) Value AT4G22720.1 | Symbols: | Actin-like ATPase superfamily protein... 1731 0.0 > AT4G22720.1 | Symbols: | Actin-like ATPase superfamily protein | chr4:11936942-11938966 FORWARD LENGTH=1539 Length=1539 Score = 1731 bits (937), Expect = 0.0 Identities = 1049/1105 (95%), Gaps = 0/1105 (0%) Strand=Plus/Plus Query 1 GTTTCTGTTTTTAAATCAAAGAAATGAAGAAGAAGATGATAGCCATTGGTTTCGAAGGTT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 206 GTTTCTGTTTTTAAATCAAAGAAATGAAGAAGAAGATGATAGCCATTGGTTTCGAAGGAT 265 Query 61 CAGCTAACAAGATTGGGGTTGGAATTGTTACATTAGACGGTACAATCTTAGCGAATCCTC 120 |||||||||||||||| ||||||||||| || ||||||||||| |||||||| ||||||| Sbjct 266 CAGCTAACAAGATTGGAGTTGGAATTGTGACTTTAGACGGTACTATCTTAGCAAATCCTC 325 Query 121 GGCATACTTATATAACACCGCCTGGTCACGGTTTTCTTCCTAGAGAGACTGCACATCACC 180 ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 326 GGCATACGTATATAACACCACCTGGTCATGGTTTTCTTCCTAGAGAGACTGCACATCACC 385 Query 181 ATCTTGACCATGTTCTTCCTTTAGTCAAATCAGCTTTAGAGACTTCTGAAGTTACTCCTG 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 386 ATCTTGACCATGTTCTTCCTTTAGTCAAATCAGCTTTAGAGACTTCTCAAGTTACTCCTG 445 Query 241 AAGAAATCGACTGCATTTGTTACACGAAAGGTCCTGGGATGGGAGCGCCGTTGCAGGTTT 300 ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct 446 AAGAAATCGACTGTATTTGTTATACGAAAGGTCCCGGGATGGGAGCGCCGTTGCAGGTTT 505 Query 301 CAGCTATTGTTGTTAGAGTATTGTCGCAGCTTTGGAAAAAGCCGATTGTTGCTGTGAATC 360 |||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 506 CAGCCATTGTTGTTAGAGTATTGTCACAGCTTTGGAAAAAGCCAATTGTTGCTGTGAATC 565 Query 361 ATTGTGTGGCTCACATTGAGATGGGGAGAGTAGTTACTGGAGCTGATGATCCTGTTGTAT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 566 ATTGTGTGGCTCACATTGAGATGGGGAGAGTAGTTACTGGAGCTGATGATCCTGTTGTGT 625 Query 421 TGTATGTGAGTGGTGGGAATACTCAGGTGATTGCTTATAGTGAAGGTAGATACCGGATTT 480 |||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||| Sbjct 626 TGTATGTGAGTGGTGGTAACACTCAGGTGATTGCTTATAGTGAAGGTAGGTACCGGATTT 685 Query 481 TCGGTGAGACTATTGATATTGCTGTTGGTAATTGTTTGGATCGGTTTGCTAGAGTCTTGA 540 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 686 TTGGTGAGACTATTGATATTGCTGTTGGTAATTGTTTGGATCGGTTTGCTAGAGTCTTGA 745 Query 541 AGCTTTCTAATGATCCAAGCCCTGGTTATAACATCGAACAGCTTGCCAAGAAAGGAGAAA 600 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct 746 AGCTTTCTAATGATCCAAGCCCTGGTTATAACATTGAACAGCTTGCTAAGAAAGGAGAAA 805 Query 601 ACTTTATTGATCTTCCGTATGCTGTTAAAGGTATGGATGTATCTTTCAGTGGAATCTTGA 660 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 806 ACTTTATTGATCTTCCGTATGCTGTTAAAGGTATGGATGTATCGTTCAGCGGAATCTTGA 865 Query 661 GTTATATCGAAACTACCGCGGAGGAGAAGCTCAAGAATAACGAGTGTACACCAGCAGACT 720 |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 866 GTTATATCGAAACTACTGCAGAGGAGAAGCTCAAGAATAACGAGTGTACACCAGCAGACT 925 Query 721 TGTGTTATTCCCTTCAAGAGACGGTGTTTGCAATGTTGGTTGAGATCACGGAAAGAGCGA 780 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct 926 TGTGTTATTCCCTTCAAGAGACGGTGTTTGCGATGTTGGTTGAGATCACAGAAAGAGCGA 985 Query 781 TGGCACATTGTGACAAGAAAGACGTTTTGATAGTTGGGGGTGTCGGTTGTAATGAGCGTT 840 |||| |||||||||||||||||||||||||||||||| ||||| || ||||| ||||||| Sbjct 986 TGGCGCATTGTGACAAGAAAGACGTTTTGATAGTTGGCGGTGTTGGGTGTAACGAGCGTT 1045 Query 841 TGCAGGACATGATGAGGACTATGTGCTCTGAACGTGATGGTAAGTTGTTTGCGACGGATG 900 ||||||| |||||||||||||||||||| ||||||||||||||| ||||||| || |||| Sbjct 1046 TGCAGGAAATGATGAGGACTATGTGCTCAGAACGTGATGGTAAGCTGTTTGCAACAGATG 1105 Query 901 ACCGTTACTGCATCGATAATGGAGCGATGATCGCCTACACAGGTCTACTCGCATTTGTTA 960 ||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||| Sbjct 1106 ACCGTTACTGCATCGATAATGGAGCTATGATCGCTTACACAGGTCTACTCGCGTTTGTTA 1165 Query 961 ATGGTATTGAAACGCCGATCGAAGACTCTACCTTTACACAGCGATTTCGAACAGACGAGG 1020 ||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| Sbjct 1166 ATGGTATTGAAACACCGATCGAAGACTCTACCTTTACACAACGATTTCGCACAGACGAGG 1225 Query 1021 TTCATGCGGTATGGCGAGAGAAAGAAGCTTTGGTACTTGGGGATAAGAACGTTGCTGTTA 1080 |||||||||| |||||||||||||||||| | |||||||||||||||| ||||| | | Sbjct 1226 TTCATGCGGTGTGGCGAGAGAAAGAAGCTGTACTACTTGGGGATAAGAAAGTTGCAGCGA 1285 Query 1081 ATTGATTATGTGCCCATTTTTGTTC 1105 ||||| | ||| ||||||||||||| Sbjct 1286 ATTGAGTCTGTCCCCATTTTTGTTC 1310 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 54166388055 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5