BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg945916
Length=1249
Score E
Sequences producing significant alignments: (Bits) Value
AT4G22180.1 | Symbols: | F-box family protein with a domain of... 1173 0.0
AT4G22185.1 | Symbols: | pseudogene, similar to P0537A05.16, s... 531 8e-150
AT4G22660.1 | Symbols: | F-box family protein with a domain of... 503 2e-141
AT4G22165.1 | Symbols: | F-box family protein with a domain of... 438 5e-122
AT4G22170.1 | Symbols: | F-box family protein with a domain of... 329 3e-89
> AT4G22180.1 | Symbols: | F-box family protein with a domain
of unknown function (DUF295) | chr4:11738574-11739782 FORWARD
LENGTH=1209
Length=1209
Score = 1173 bits (635), Expect = 0.0
Identities = 1043/1235 (84%), Gaps = 48/1235 (4%)
Strand=Plus/Plus
Query 21 ATGGAGAAAG-GGCATGAA-CCTAGTTCTCCTAAGCGTCTCAGACGAGATACACCCAATT 78
||||| |||| ||||| || |||||||||||||||||||||||| |||||||||||||||
Sbjct 1 ATGGA-AAAGTGGCAT-AACCCTAGTTCTCCTAAGCGTCTCAGAGGAGATACACCCAATT 58
Query 79 CCTGGTCGGAGCTTCCTCTAGATCTCTTGACTTCAGTGTTCGAACGCCTCAGCTTTGCTA 138
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |
Sbjct 59 CCTGGTCGGAGCTTCCTCTAGATCTCTTGACTGCAGTGTTCGAACGCCTCAGCTATGCAA 118
Query 139 ATTTCCATCGAGCTAAATTCGTCTGTTCATTTTGGCACTCCGCTTCGAGACAAAT-CATC 197
||||||| |||||||||| ||||||||| | ||||||||||| ||||||| ||| | |
Sbjct 119 ATTTCCAACGAGCTAAATCCGTCTGTTCGTCTTGGCACTCCGGATCGAGAC-AATCCGTT 177
Query 198 CCCAAACAGA-CCAGTTGGCTGATTCTCTTCCCCAGAGACA-ATGACAACAATAACTCAT 255
|||| ||||| || ||||||||||||||| ||| | || | | |||||||| || ||||
Sbjct 178 CCCATACAGATCC-CTTGGCTGATTCTCTT-CCC-G-GA-ATACGACAACAACAATTCAT 232
Query 256 GCACGTTGTTCAATCCCGAGGAGAAACACAAACTTTACAAAACGAAAGATCTTGGTGAAG 315
|||||||||||||||||||||| ||| | || ||||||||| |||||||||||||| |
Sbjct 233 GCACGTTGTTCAATCCCGAGGAAAAAGGCCAAGTTTACAAAATGAAAGATCTTGGTGTTG 292
Query 316 AATTTGCAAAGAGCCTTTGTAAGGCAACCTATGGAAGTTGGCTCCTTATGCGAGATCCTC 375
||||| ||||||| |||||| |||||||| ||||| |||||||||||||||||||| |
Sbjct 293 AATTTTCAAAGAGTGTTTGTACTGCAACCTACGGAAGCTGGCTCCTTATGCGAGATCCAC 352
Query 376 GGTTTAATTTATACATTTTGAATATATTCACCCGA-GAGAGGATCAATCTACCTCCTGTG 434
|| |||| | || ||||||||| ||||||||| | |||||| | |||||||||||| |
Sbjct 353 TGTATAATCTCTATATTTTGAATCTATTCACCC-ACGAGAGGGTAAATCTACCTCCTTTC 411
Query 435 GAGTCACAACTTGGAATGACAAAGATGGAGCGAACCATAGATGATTGCTTTCGCATTATT 494
|||||||||||||| ||| |||||| || ||||||||| ||||||| ||| || | |
Sbjct 412 GAGTCACAACTTGGCATGGTAAAGATTGAACGAACCATATATGATTGGTTT--CACT-CT 468
Query 495 TCACACGATCACAACATGATCAGTAGGGAGTACATAGGTCTTTA-TATAGGACCCTGTGT 553
||| | || ||||| | | || | | | ||| | || ||| ||| | || |||
Sbjct 469 ACACTCCATTACAAC--GGTAAGGA-GTACCACAAACGT-ATTAGAATACTATCCACTGT 524
Query 554 GTTTTGGATCGACGAGAAAACCAAAGATTACATAGTTATATGGGGACTTGGAAGATGGTC 613
|||||||||||| |||||||| ||||||||| |||||||||||||||||||||| | |
Sbjct 525 GTTTTGGATCGATGAGAAAACAAAAGATTACGTAGTTATATGGGGACTTGGAAGTTCATG 584
Query 614 TGTGGTTTATTCCAAGAAAGGAGATACCTCG-TGGAATCAGATTCCGGAAATTTCAGATT 672
|||||||||||||||||||||||||| | | |||||||| ||||| |||| |||| |||
Sbjct 585 TGTGGTTTATTCCAAGAAAGGAGATAAAT-GTTGGAATCAAATTCCAGAAACTTCAAATT 643
Query 673 GTTGTGACATGGTTTACAAAGATTACAAGCTTTACTTCTCTGGC-TCTGGCTACCAATGT 731
|| | ||||||||||||| ||| ||||||||||||||||| | ||| |||| ||| |
Sbjct 644 GTCATCACATGGTTTACAAGGATCACAAGCTTTACTTCTCT-ACGTCTACCTACAAATAT 702
Query 732 GATTTCAGAATCTTTGATTTCTCTAGAGAGACTCCGCAACAAACCTTTCAAGG-TATTGT 790
|| |||||||||||||||||||||||||||| ||| ||||||| ||||||||| ||| ||
Sbjct 703 GAATTCAGAATCTTTGATTTCTCTAGAGAGATTCCTCAACAAATCTTTCAAGGCTAT-GT 761
Query 791 CATTATGCAAGGACTTATATTAAATCATCGTCATGGTCAACCAGGCTATTCCCACTGC-A 849
||||||||||||||||| |||||||| || || |||||||||||| ||| ||| ||| |
Sbjct 762 CATTATGCAAGGACTTACATTAAATCGTCATCGTGGTCAACCAGGTTAT-CCCTTTGCTA 820
Query 850 CTGTT-AGTACAAAACTTGTAGTCACAGTAAATGGAGATGTCCTCAAGGTTGACAGAATA 908
|| || | |||||||||||| |||||||||| |||||||||||| |||||||||||||||
Sbjct 821 CTATTGA-TACAAAACTTGTTGTCACAGTAACTGGAGATGTCCTTAAGGTTGACAGAATA 879
Query 909 -TGG-GAGCGTAAAACCAGAATTTGCAGGTTTTTTGACGTATACAAGGTTTATTCATCAG 966
||| || | | | | ||||| ||||| |||||| |||| ||||||||||||||||| |
Sbjct 880 GTGGAGAAAG-AGA-CTAGAATCTGCAGATTTTTTTACGTCTACAAGGTTTATTCATCGG 937
Query 967 AGTCCT-TAAAGAACTATGAAAAAGTTGAATCTTTGGGCGACGAGGCAATGCTTTTGGAT 1025
||||| ||| ||| ||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 938 GGTCCTATAA-GAAATATGAAAAAGTTGAATCTTTGGGGGACGAGGCAATTCTTTTGGAT 996
Query 1026 CTAGGTATCACTGTGCTCGCCAATGACATTGAGGGGCTCAAAAGAAATTGCATCTATTTC 1085
|||||||||||| ||||||||||||||| || ||| ||| | |||||| ||| ||||||
Sbjct 997 CTAGGTATCACTATGCTCGCCAATGACACTGTGGGACTCCTAGGAAATTCCATTTATTTC 1056
Query 1086 AGTGGTAGTCTTGA-AAA-T--A---TCATTCATGATAAATTTATCTTCAATATCGAGAC 1138
||||||| || | | ||| | | ||||| | |||| ||||||||||| | |||||||
Sbjct 1057 AGTGGTACTCAT-ACAAAGTCGAAGGTCATTAACGATACATTTATCTTCAGTCTCGAGAC 1115
Query 1139 ACAGAAAATGGAGCGAGTGCACAAACTTGATTGTTCATCTGCTCAACTCTCTAGTGCTCG 1198
|||||| ||||| | ||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 1116 ACAGAAGATGGATCCAGTGCACAAGTTTGATTGTTCATCAGCTCAACTCTCTAGTGCTCG 1175
Query 1199 ATGGTTCTTACCAAGTTTCACACAAACTTGATTGA 1233
||||||||||||||||| |||||||||||||||||
Sbjct 1176 ATGGTTCTTACCAAGTT-CACACAAACTTGATTGA 1209
> AT4G22185.1 | Symbols: | pseudogene, similar to P0537A05.16,
similar to protein; blastp match of 28% identity and 3.1e-07
P-value to GP|13366010|dbj|BAB39287.1||AP002971 P0537A05.16
{Oryza sativa (japonica cultivar-group)} | chr4:11740053-11741234
FORWARD LENGTH=1182
Length=1182
Score = 531 bits (287), Expect = 8e-150
Identities = 566/695 (81%), Gaps = 41/695 (6%)
Strand=Plus/Plus
Query 32 GCATGAA-CCTAGTTCTCCTAAGCGTCTCAGACGAGATACA-CCCAATTCCTGGTCGGAG 89
|||| || |||| ||||| |||||||||||||||||| || ||| ||||||||||||||
Sbjct 30 GCAT-AACCCTAATTCTCAAAAGCGTCTCAGACGAGATTCATCCC-ATTCCTGGTCGGAG 87
Query 90 CTTCCTCTAGATCTCTTG-ACTTCAGTGTTCGAACGCCTCAGCTTTGCTAATTTCCATCG 148
|||||||||||||||||| | || ||||||| ||||||||| |||||||||||||| ||
Sbjct 88 CTTCCTCTAGATCTCTTGGATTT-AGTGTTCCAACGCCTCAATTTTGCTAATTTCCAACG 146
Query 149 AGCTAAAT-TCGTCTGTTCATTTTGGCACTCCGCTTCGAGACAAAT-CATCCCCAAA-C- 204
||| |||| | || ||||| | |||| |||| |||||||||||| | | | ||||| |
Sbjct 147 AGCCAAATCT-GTGTGTTCGTCTTGGTACTCTGCTTCGAGACAA-TGCGTGACCAAAACT 204
Query 205 A-GA-CCAGTTGGCTGATTCTCTTCCCCAGAGACAATGACAACAATAACTCATGCACGTT 262
| || || |||||||||||| ||||||| | | | || || || || |||| |||| |
Sbjct 205 AAGATCCC-TTGGCTGATTCTATTCCCCA-A-A-AGCGAAAAAAACAATTCATTCACGCT 260
Query 263 GTTCAATCCCGAGGAGAAACACAAACTTTACAAAACGAAAGATCTTGGTGAAGAATTTGC 322
||||||||||||| |||||||||| |||||||||| |||||||||||| ||||||||
Sbjct 261 CCTCAATCCCGAGGAAAAACACAAACGTTACAAAACGCAAGATCTTGGTGTGGAATTTGC 320
Query 323 AAAGAGCCTTTGTA-AGGCAACCTATGGAAGTTGGCTCCTTATGCGAGATCCTCGGTTTA 381
||| | |||||| || ||||||||||||||||||||||||||| |||| | || ||
Sbjct 321 GAAGTGTGTTTGTATAG-CAACCTATGGAAGTTGGCTCCTTATGCAAGATTCAAAGTGTA 379
Query 382 ATTTATACATTTTGAATATATTCACCCGAGAGAGGATCAATCTACCTCCTGTGGAGTCAC 441
|| || ||||||||||| ||||||||| ||||||||||| || ||||||||||||||||
Sbjct 380 ATCTAAACATTTTGAATCCATTCACCCGCGAGAGGATCAACCTTCCTCCTGTGGAGTCAC 439
Query 442 AACTTGG-AATGACAAAGATG-GAGCGAACCATAGATGATTGCTTTCGCATTATTTCACA 499
||| ||| || | |||| | || |||| |||||||||| | ||||||||| | ||||
Sbjct 440 AACGTGGCAAGGT-AAAGGTTAGA-CGAATCATAGATGATAGATTTCGCATT-T--CACA 494
Query 500 CGATCACAACATGATCAGTAGGGAGTACATAGGTCTTTA-TATAGGA-CCCTGTGTGTTT 557
| |||||| | || || | ||| || | | | | ||||||| ||| |||||||
Sbjct 495 CTATCACATCG-GA--AGC-G--AGTCCAAATATATG-AGTATAGGATCCCC-TGTGTTT 546
Query 558 TGGATCGACGAGAAAACCAAAGATTACATAGTTATATGGGGACTTGGAAGAT-GGTCTGT 616
||||| |||||||||||||||||||| |||||| | ||||||||| || ||| ||| |||
Sbjct 547 TGGATTGACGAGAAAACCAAAGATTATATAGTTTTTTGGGGACTTAGA-GATTGGTGTGT 605
Query 617 GGTTTATTCCAAGAAAGGAG-ATACCTCGTGGAATCAGATTCCGGAAATTTCAGATTGTT 675
||||| | |||||||||| | |||||||||||||||| ||||| ||| |||| |||||
Sbjct 606 GGTTTCTGCCAAGAAAGG-GTATACCTCGTGGAATCAAATTCCCAAAACTTCAAATTGTC 664
Query 676 GTGACATGGTTTACAAAGATTACAAGCTTTACTTC 710
|||||||||| ||||| ||| ||||||||||||||
Sbjct 665 GTGACATGGTGTACAAGGATCACAAGCTTTACTTC 699
> AT4G22660.1 | Symbols: | F-box family protein with a domain
of unknown function (DUF295) | chr4:11914981-11916171 REVERSE
LENGTH=1191
Length=1191
Score = 503 bits (272), Expect = 2e-141
Identities = 914/1208 (76%), Gaps = 107/1208 (9%)
Strand=Plus/Plus
Query 71 ACCC-AATTCCTGGTCGGAGCTTCCTCTAGATCTCTTG-ACTTCAGTGTTCGAACGCCTC 128
|||| ||| |||||||||| |||||||||||||||||| |||| ||| ||| ||||||||
Sbjct 17 ACCCTAATACCTGGTCGGATCTTCCTCTAGATCTCTTGAACTT-AGTTTTCAAACGCCTC 75
Query 129 AGCTTTGCTAA-TTTCCATCGAGCTAAATTC-GTCTGTTCATTTTGGCACTCCGCTTCGA 186
||||||||||| |||| | | ||| ||| || || ||||| | |||| |||| |||||||
Sbjct 76 AGCTTTGCTAATTTTCGA-CAAGCCAAA-TCGGTGTGTTCGTCTTGGTACTCTGCTTCGA 133
Query 187 GACAAAT-CAT-CCC-CAAA-CAGA-CCAGTTGGCTGATTCTCTTCCCCAGAGAC---AA 238
|| ||| | | ||| ||| |||| || ||||||||| |||||||||| |||| ||
Sbjct 134 AAC-AATCCGTGCCCAAAAATCAGATCC-CTTGGCTGATGCTCTTCCCCAAAGACAAAAA 191
Query 239 TGACAACAATAAC---TCATGCACG---TTGTTCAATCCCGAGGAGAAACACAAACTTTA 292
||||||| ||| ||||||||| || |||||||||||||| ||| || |||||||
Sbjct 192 CAACAACAAAAACAGTTCATGCACGATTTTTTTCAATCCCGAGGACAAAGACCAACTTTA 251
Query 293 CAAAACGAAAGATCTTGGTGAAGAATTTGCAAAGAGCCTTTGT-AAGGCAACCTATGGAA 351
| ||||| |||||||||||| |||||||||||||| ||||| | |||||||||||||
Sbjct 252 CCAAACGCAAGATCTTGGTGTTGAATTTGCAAAGAGTGTTTGTCTA-GCAACCTATGGAA 310
Query 352 GTTGGCTCCTTATGCGAGATCCTCGGTTTAATTTATACATTTTGAATATATTCACCCGA- 410
|||||||||| |||| |||| | || |||| |||||||||||||| ||||| || |
Sbjct 311 GTTGGCTCCTGATGCAAGATTCAAAGTATAATCTATACATTTTGAATCCATTCA-CCTAC 369
Query 411 GAGAGGATCAATCTACCTC-CTGTGGAGTCACAAC---TTGGAATGACAAAGATGGAGCG 466
|||| |||| ||| || | || | || ||||||| |||| ||| |||| | || |
Sbjct 370 GAGAAGATCGGTCTTCC-CGCTATTGAATCACAACAAGTTGGCATGGTAAAGGTTGACCA 428
Query 467 AACCATAGATGATTGCTTTCGCATTA-TTTCACACGATCACAA-CATGATCAGTAGGGAG 524
|||||||||||| || ||| | | | |||| |||||||||| || | | | || |
Sbjct 429 AACCATAGATGA-TGATTT-TC-TAACTTTC-GACGATCACAACCACG-TTA--AGTTA- 480
Query 525 TACATAGGTCTTTATA---TA-GGACCCTGTGTGTTTTGGATCGACGAGAAAACCAAAGA 580
| || |||| | ||| || | |||| |||||||||||| |||||||||||||||||
Sbjct 481 TTCAAAGGTAATAATACCGTACGTACCC-CTGTGTTTTGGATTGACGAGAAAACCAAAGA 539
Query 581 TTACATAGTTATATGGGGACTTGGAAGA-TGGTCTGTGGTTTATTCCAAGAAAGGAGATA 639
||||||| | | ||||| ||||| | | |||| |||||||||| ||||||| |||||||
Sbjct 540 GTACATAGCTCTGTGGGGGCTTGG-ATATTGGTGTGTGGTTTATGCCAAGAACGGAGATA 598
Query 640 CCTCGTGGAATCAGATTCC-GGAA--ATTTCAGATTGT-TGTGACATGGTTTACAAAGAT 695
| ||||||||| ||||| | || |||| ||||| | | ||||||||||||||| |||
Sbjct 599 AGTTGTGGAATCAAATTCCAGAAATTATTTTAGATTCTCT-TGACATGGTTTACAAGGAT 657
Query 696 TACAAGCTTTACTTCTCTGGCTCTGGCTACCA-ATGTGATTTCAGAATCTTTGATTTCTC 754
||||||||||| || | | | |||| || | | ||||| |||| | ||||| ||
Sbjct 658 CACAAGCTTTAC-TC-AT---T-TAGCTA-CAGAAATCTTTTCACAATCCTAGATTTTTC 710
Query 755 TAGAGAGACTCCGC-AACAAACCTTTCAAGGTATTGTCAT-TATG-C-A-AGGA-CTTA- 807
| |||||| ||| | || || |||||||| || || | || ||| | | | || || |
Sbjct 711 TGGAGAGATTCCTCGAA-AAGCCTTTCAATGT-TT-T-ATGCATGTCTATA-GATCTGAG 765
Query 808 T-ATTAAATCATCGTCA-TGGTCAACCAGGCT-ATTCCCACTGCACTG-TTAGTACAAAA 863
| |||| || |||| | | ||||| | | | |||| ||| || | || ||||||
Sbjct 766 TGGTTAAGTCCTCGT-AGTCGTCAATTAAG-TAATTCATGGTGCGTTGCTGAG-ACAAAA 822
Query 864 CTTGTAGTCACAGTAAATGGAGATGTCCTCAAGGTTGACAGAAT-ATGGGAGCGTAAAAC 922
|||||||||||||||| |||||||||||| |||||| ||||| | || | | |
Sbjct 823 CTTGTAGTCACAGTAACCGGAGATGTCCTCTTGGTTGAAAGAATGTTAAGA-CATTGGTC 881
Query 923 CAGAATTTGCAGGTTTTTTGACGTATACAAGGTTTATTCATCA--G--AGTCCTTAAAGA 978
|||| | || || || |||| |||||| ||||||| ||| | | | ||| | |
Sbjct 882 TAGAA--TCCA-GTCATTCAACGTCTACAAGTTTTATTCGTCAGGGACATTTCTT-GATA 937
Query 979 ACTATGAAAAAGTTGAATCTTTGGGCGACGAGGCAATGCTTTTGGATCTAGGTATCACTG 1038
| |||||| | ||| ||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 938 AATATGAACTTGCTGATTCTTTGGGCGACGAGGCAATGCTTTTGGATCTAGGCATCACCG 997
Query 1039 TGCTCGCCAATGACA-TTGAGGGGCTCAAAAGAAATTGC-ATCTATTTCAGTGGTAGTCT 1096
||||||||||||| | ||||||| ||| | |||||| | || |||||||||| ||| |
Sbjct 998 TGCTCGCCAATGA-AGTTGAGGGACTCCATAGAAATA-CTATATATTTCAGTGATAGCCA 1055
Query 1097 TGAAAATATCATTCATGATAAATTTATCTTCAAT-ATCGAGACACAGAAAATGGAGCGAG 1155
||| | | || | ||| ||| | |||||| | |||||||| | | ||||||| |
Sbjct 1056 TGACACGACCACAAAAGATCTCTTTCTGTTCAATTA-CGAGACACGGGAGATGGAGCCAC 1114
Query 1156 TGCACAAACTTGATT--G-TTCATC-TG-CTC-AACTCTCTAGTGCTCGATGGTTCTTAC 1209
|||||||| |||||| | || || | || |||||||| | |||||||||||||||
Sbjct 1115 TGCACAAATTTGATTTCGATTGTTCGTTACTTGAACTCTCT-G--CTCGATGGTTCTTAC 1171
Query 1210 CAAG-TTT 1216
|||| |||
Sbjct 1172 CAAGCTTT 1179
> AT4G22165.1 | Symbols: | F-box family protein with a domain
of unknown function (DUF295) | chr4:11734328-11735419 FORWARD
LENGTH=1092
Length=1092
Score = 438 bits (237), Expect = 5e-122
Identities = 528/661 (80%), Gaps = 50/661 (8%)
Strand=Plus/Plus
Query 67 ATACACCC-AATTCCTGGTCGGAGCTTCCTCTAGATCTCTTGA-CTTCAGTGTTCGAACG 124
||| |||| ||| | |||||||||||||||||||||||||||| ||| ||| ||| ||||
Sbjct 14 ATA-ACCCTAATACATGGTCGGAGCTTCCTCTAGATCTCTTGAACTT-AGTTTTCAAACG 71
Query 125 CCTCAGCTTTGCTAATTTCCATCGAGCTAAATTCGTCTGTTC-ATTTTGGCACTCCGCTT 183
||||||||| | ||||||||| |||||||||| ||| || || | | || |||| | ||
Sbjct 72 CCTCAGCTTAGTTAATTTCCAACGAGCTAAATCCGTATGCTCCACTC-GGTACTCTGTTT 130
Query 184 CGAGACAAAT-CATCCCCAAAC---AGACCAG-TTGGCTGATTCTCTTCCCCAGAGACAA 238
|||||||| | | | ||| ||| ||| | | || ||||||||||||||||| ||| |
Sbjct 131 CGAGACAA-TGCGTGCCCGAACGTCAGATC-GCTTTGCTGATTCTCTTCCCCAAAGA-A- 186
Query 239 TGACAACA---ATAAC--T-CATGCACGTTGTTCAATCCCGAGGAGAAACACAAACTTTA 292
||||||| ||||| | | || | ||||||||||||||| || ||| ||||||||||
Sbjct 187 -GACAACACCGATAACAGTACTTGTAAGTTGTTCAATCCCGACGAAAAAGACAAACTTTA 245
Query 293 CAAAACGAAAGATCTTGGTGAAGAATTTGCAAAGAGCCTTTGTAAGGCAACCTATGGAAG 352
||| | | |||||||||||| |||||||||||||| |||||| |||||| ||||||||
Sbjct 246 CAAGATGCAAGATCTTGGTGTGGAATTTGCAAAGAGTGTTTGTAGGGCAACTTATGGAAG 305
Query 353 TTGGCTCCTTATGCGAGATCCTCGGTTTAATTTATACATTTTGAATATATTCACCCG-AG 411
||||||||| |||| |||| | || | || |||||||||||||||||||||| || |
Sbjct 306 TTGGCTCCTGATGCAAGATTCAAAGTATCATCTATACATTTTGAATATATTCACTCGCA- 364
Query 412 AGAGGATCAATCTACCTCCTGTGGAGTCACAACTTGGAATGACAAAGATGGAGCGAACCA 471
||||||||||||| ||||||||||||||||||||||| ||| |||||| || |||||||
Sbjct 365 AGAGGATCAATCTTCCTCCTGTGGAGTCACAACTTGGCATGGTAAAGATTGAACGAACCA 424
Query 472 TAGATGATTGCTTTCGCATTATTTCACACGATCACAACATGATCAGTAGGGAGTACATAG 531
|| ||||||| |||| | || || |||||| |||| | | | | | | | |
Sbjct 425 TATATGATTGGTTTCAC-TT-TT-CACACGGTCACTATA-GCTT--T------T-C---G 468
Query 532 GTCTTTATATAGGACCCTGTGTGTTTTGGATCGACGAGAAAACCAAAGATTACATAGTTA 591
|| | | | ||| |||||||||||| |||||| || |||||||||| |||||||
Sbjct 469 --CT--A-A--GTTCCCC-TGTGTTTTGGATTGACGAGGAATCCAAAGATTATATAGTTA 520
Query 592 TATGGGGACTTGGAAGATGGTC-TGTGGTTTATTCCAAGAAAGGAGATACCTCGTGGAAT 650
| |||||||||||| | | | |||||||||| ||||||||||||||||||||||||||
Sbjct 521 TGTGGGGACTTGGA-GTTTATTGTGTGGTTTATGCCAAGAAAGGAGATACCTCGTGGAAT 579
Query 651 CAGATTCCGGAAATTTCAGATTGTTGTGACATGGTTTACAAAGATTACAAGCTTTACTTC 710
|| || || ||| |||| ||| || ||||||||||||||| ||| ||||||||||||||
Sbjct 580 CAAATCCCCCAAACTTCATATTTTTATGACATGGTTTACAAGGATCACAAGCTTTACTTC 639
Query 711 T 711
|
Sbjct 640 T 640
> AT4G22170.1 | Symbols: | F-box family protein with a domain
of unknown function (DUF295) | chr4:11736653-11737744 FORWARD
LENGTH=1092
Length=1092
Score = 329 bits (178), Expect = 3e-89
Identities = 322/388 (83%), Gaps = 23/388 (6%)
Strand=Plus/Plus
Query 67 ATACACCC-AATTCCTGGTCGGAGCTTCCTCTA-GATCTCTTG-ACTTCAGTGTTCGAAC 123
||| |||| ||||||||||| || ||||||| | ||||||||| |||| ||||||||||
Sbjct 14 ATA-ACCCTAATTCCTGGTCTGATCTTCCTC-ACGATCTCTTGAACTT-GGTGTTCGAAC 70
Query 124 GCCTCAGCTTTGCTAATTTCCATCGAGCTAAATTCGTCTGTTCATTTTGGCACTCCGCTT 183
|||||||||||||||||||| | ||||| | | ||| ||||| | |||| |||| ||||
Sbjct 71 GCCTCAGCTTTGCTAATTTCAACCGAGCCAGGTCCGTGTGTTCGTCTTGGTACTCTGCTT 130
Query 184 CGAGACAAATCA-TCCCCAAA---CAGA-CCAGTTGGCTGATTCTCTTCCCCAGA-GACA 237
|||||||| || | |||||| |||| ||| |||||||||||||||||| || ||||
Sbjct 131 CGAGACAA-TCGGTGCCCAAAAATCAGATCCA-TTGGCTGATTCTCTTCCCT-GAAGACA 187
Query 238 ATGACAACAATAAC-----T-CATGCACGTTGTTCAATCCCGAGGAGAAACACAAACTTT 291
| ||||||| ||| | |||||||||||||||||||||| || ||| |||||||||
Sbjct 188 ACAACAACAAGAACAACAGTTCATGCACGTTGTTCAATCCCGATGAAAAAGACAAACTTT 247
Query 292 ACAAAACGAAAGATCTTGGTGAAGAATTTGCAAAGAGCCTTTGTAAGGCAACCTATGGAA 351
|||||||| || |||||| ||| |||||||||||||| |||||| ||||||||||||||
Sbjct 248 ACAAAACGCAACATCTTGATGAGGAATTTGCAAAGAGTGTTTGTAGGGCAACCTATGGAA 307
Query 352 GTTGGCTCCTTATGCG-AGATCCTCGGTTTAATTTATACATTTTGAATATATTCACCCGA 410
||||| |||| ||| | |||||||| ||||||| | || ||||||||| | || |||||
Sbjct 308 GTTGGTTCCTAATG-GTAGATCCTCTGTTTAATCTCTATATTTTGAATCTCTTTACCCGC 366
Query 411 GAGAGGATCAATCTACCTCCTGTGGAGT 438
||||| |||||||||| ||| |||||||
Sbjct 367 GAGAGAATCAATCTACATCCCGTGGAGT 394
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 61395266535
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5