BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg945962
Length=2647
Score E
Sequences producing significant alignments: (Bits) Value
AT4G21940.2 | Symbols: CPK15 | calcium-dependent protein kinase... 1168 0.0
AT4G04720.1 | Symbols: CPK21 | calcium-dependent protein kinase... 601 1e-170
AT4G04740.2 | Symbols: CPK23 | calcium-dependent protein kinase... 409 8e-113
AT4G19210.1 | Symbols: ATRLI2, RLI2 | RNAse l inhibitor protein... 126 1e-27
AT4G04710.1 | Symbols: CPK22 | calcium-dependent protein kinase... 121 4e-26
AT3G13640.1 | Symbols: ATRLI1, RLI1 | RNAse l inhibitor protein... 100 6e-20
> AT4G21940.2 | Symbols: CPK15 | calcium-dependent protein kinase
15 | chr4:11640802-11643762 FORWARD LENGTH=2006
Length=2006
Score = 1168 bits (632), Expect = 0.0
Identities = 808/887 (91%), Gaps = 35/887 (4%)
Strand=Plus/Plus
Query 1760 AAAGTTTACAGGGGTATAGTAGGAAGTGCTTACTATGTTGCTCCTGAAGTATTAAGACGA 1819
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 817 AAAGTTTATAGGGATATAGTAGGAAGTGCTTACTATGTTGCTCCTGAAGTATTAAGAAGA 876
Query 1820 AGTTATGGAAAAGAAATCGATATTTGGAGTGCAGGGATTGTTCTATACATATTGCTTTGT 1879
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct 877 AGTTATGGAAAAGAAATCGATATTTGGAGTGCAGGGATTATTCTATACATCTTGCTTTGT 936
Query 1880 GGT-T---TACAATGTAATaaaaaaaCTGAGATGGGGATATTTGATGAGATTATAAAGGG 1935
||| | | | | | | ||||||||| |||||||||| ||||||||||||||||
Sbjct 937 GGTGTGCCTCCTTTTTGGT-CTGAAACTGAGAAGGGGATATTTAATGAGATTATAAAGGG 995
Query 1936 AGAAATTGATTTTGAGAGTCAACCATGGCCTTCTATATCTGAGAGTGCTAAAGACCTTGT 1995
||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||
Sbjct 996 AGAAATTGATTTTGATAGCCAACCATGGCCTTCTATATCTGAGAGTGCTAAAGATCTTGT 1055
Query 1996 GAGGAAGTTGCTTACTAAGGACCCTAAGCAACGAATCTCAGCGGCACAA------G--C- 2046
||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 1056 GAGGAAGTTGCTTACTAAGGACCCTAAGCAACGAATCTCAGCGGCACAAGCTCTTGAACA 1115
Query 2047 T-C-T---T--GAGGAGGA-TA--A---G-C-A---TATTGATAGTGCTGTGTTATCTCG 2088
| | | | |||||||| | | | | | ||||||||||||||| ||||||||
Sbjct 1116 TCCTTGGATCAGAGGAGGAGAAGCACCGGACAAGCCTATTGATAGTGCTGTTTTATCTCG 1175
Query 2089 AATGAAGCAATTTCGAGCAATGAACAAACTTAAGAAGCTAGCTCTTAAGGTTATTGCAGA 2148
||||||||||| ||||||||||| || ||||| ||||||||||| ||||||||||||||
Sbjct 1176 GATGAAGCAATTCCGAGCAATGAATAAGCTTAAAAAGCTAGCTCTAAAGGTTATTGCAGA 1235
Query 2149 GAGTCTCTCAGAAGAGGAAATTAAAGGTCTTAAAACAATGTTTGCGAATATGGATACCGA 2208
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1236 GAGTCTCTCGGAAGAGGAAATTAAAGGTCTTAAAACCATGTTTGCGAATATGGATACTGA 1295
Query 2209 TAAAAGCGGAACAATTACTTACGAAGAACTGAAAACCGGGCTGGCTAAACTTGGCTCTAA 2268
|||||||| ||||| ||||| ||||||||||||| |||||| |||||||||||||||||
Sbjct 1296 CAAAAGCGGCACAATCACTTATGAAGAACTGAAAAACGGGCTAGCTAAACTTGGCTCTAA 1355
Query 2269 ACTCACTGAAGCTGAAGTGAAGCAACTCATGGAAGCCGCTGATGTAGATGGTAATGGAAC 2328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1356 ACTCACTGAAGCTGAAGTGAAGCAACTCATGGAAGCCGCTGATGTAGATGGTAATGGAAC 1415
Query 2329 AATAGACTACATCGAGTTTATCTCAGCGACGATGCATAGATACAGATTTGATCGAGATGA 2388
||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1416 AATTGACTACATCGAATTTATCTCAGCAACGATGCATAGATACAGATTTGATCGAGATGA 1475
Query 2389 ACACGTATTCAAAGCCTTCCAATACTTCGACAAAGACAACAGCTGGTTTATCACAATGGA 2448
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1476 ACACGTATTCAAAGCCTTCCAATACTTCGACAAAGACAACAGCGGGTTTATCACAATGGA 1535
Query 2449 TGAGTTGGAGTCAGCCATGAAAGAATATGGTATGGGAGATGAAGCTAGCATCAAAGAAGT 2508
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1536 TGAGTTGGAGTCAGCCATGAAAGAGTATGGTATGGGAGATGAAGCTAGCATCAAAGAAGT 1595
Query 2509 CATAGCGGAAGTCGATACAGATAATGATGGAAGAATAAACTATGAAGAATTTTGTGCCAT 2568
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1596 CATAGCGGAAGTCGATACAGATAACGATGGAAGAATAAACTATGAAGAATTTTGTGCGAT 1655
Query 2569 GATGAGAAGTGGTATCACACTGCCAACA-CAAGGGAAC-TTCTTCCA 2613
||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct 1656 GATGAGAAGTGGTATCACACTGCCA-CAACAAGGGAAAATTCTTCCA 1701
Score = 837 bits (453), Expect = 0.0
Identities = 595/659 (90%), Gaps = 28/659 (4%)
Strand=Plus/Plus
Query 1045 TATGCTTAAAGCTACTGATTTTGGATTGTCTGTGTTCACTGAAGTAGGGAAAGTTTACAG 1104
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||
Sbjct 768 TATGCTTAAAGCTACTGATTTTGGATTGTCTGTGTTCATTGAAGAAGGGAAAGTTTATAG 827
Query 1105 GGATATAGTAGGAAGTGCTTACTATGTTGCTCCTGAAGTATTAAGGCGAAGTTATGGAAA 1164
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 828 GGATATAGTAGGAAGTGCTTACTATGTTGCTCCTGAAGTATTAAGAAGAAGTTATGGAAA 887
Query 1165 GGAAATCGATATTTGGAGTGCAGGGATTATTCTATACATCTTGCTTTGTGGTGTGCCTCC 1224
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 888 AGAAATCGATATTTGGAGTGCAGGGATTATTCTATACATCTTGCTTTGTGGTGTGCCTCC 947
Query 1225 TTTTTGGGCTGAAACTGAGAAGGGGATATTTGATGAGATTATAAAGGGAGAAATTGATTT 1284
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 948 TTTTTGGTCTGAAACTGAGAAGGGGATATTTAATGAGATTATAAAGGGAGAAATTGATTT 1007
Query 1285 TCAGAGCCAACCATGGCCTTCTATATCTGAGAGTGCTAAAGACCTAGTGAGGAAGTTGCT 1344
| | |||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 1008 TGATAGCCAACCATGGCCTTCTATATCTGAGAGTGCTAAAGATCTTGTGAGGAAGTTGCT 1067
Query 1345 TACTAAGGACCCTAAGCAACGAAGCTCAGCGGCACAAGCTCTTGAG-ATCCTTGTGGGTT 1403
||||||||||||||||||||||| ||||||||||||||||||||| ||||||| | |
Sbjct 1068 TACTAAGGACCCTAAGCAACGAATCTCAGCGGCACAAGCTCTTGAACATCCTTG-GA-T- 1124
Query 1404 TTCTTTCAGAACATCCTTGGATTAGAGGAGGAGAAGCGTCAGACAAGCCTATCGATAGTG 1463
| ||| ||| ||| | || | || ||||||||||| |||||||
Sbjct 1125 --C----AGA--------GGAG--GAG-A--AGCACCG---GACAAGCCTATTGATAGTG 1162
Query 1464 CTGTGTTATCTCGCATGAAGCAATTCCGAGCAGTGAACAAGCTTAAGAAGCTAGCTCTTA 1523
|||| |||||||| |||||||||||||||||| |||| |||||||| ||||||||||| |
Sbjct 1163 CTGTTTTATCTCGGATGAAGCAATTCCGAGCAATGAATAAGCTTAAAAAGCTAGCTCTAA 1222
Query 1524 AGGTTATTGCAGAAAGTCTCTCGGAAGAGGAAATTAAAGGTCTTAAAACCATGTTTACGA 1583
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1223 AGGTTATTGCAGAGAGTCTCTCGGAAGAGGAAATTAAAGGTCTTAAAACCATGTTTGCGA 1282
Query 1584 ATATGGATACCGATAAAAGCGGCACAATCAGTTACGAAGAACTGAAAACCGGGTTGGCTA 1643
|||||||||| || |||||||||||||||| ||| ||||||||||||| |||| | ||||
Sbjct 1283 ATATGGATACTGACAAAAGCGGCACAATCACTTATGAAGAACTGAAAAACGGGCTAGCTA 1342
Query 1644 AACTCGGCTCTAAACTAACTGAAGCTGAAGTGAAGCAACTCATGGAAGCCG-TGA-GTA 1700
|||| ||||||||||| |||||||||||||||||||||||||||||||||| ||| |||
Sbjct 1343 AACTTGGCTCTAAACTCACTGAAGCTGAAGTGAAGCAACTCATGGAAGCCGCTGATGTA 1401
Score = 267 bits (144), Expect = 5e-70
Identities = 169/180 (94%), Gaps = 5/180 (3%)
Strand=Plus/Plus
Query 829 CTCTGAGAAAGCAGCTGCTGGTGTTATTAGATCGATTTTGAATGTTGTTCAGATTTGCCA 888
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct 639 CTCTGAGAAAGCAGCTGCTGGTGTTATTAGATCGGTTTTGAATGTTGTTCAGATTTGTCA 698
Query 889 TTTCATGGGAGTGATACATCTTGATCTTAAGCCTGAGAATTTCTTGCTAGCTAG-TAGTA 947
||||||||||||||| |||| |||||| ||||||||||| || || || ||| | |||||
Sbjct 699 TTTCATGGGAGTGATTCATCGTGATCTCAAGCCTGAGAA-TT-TT-CT-GCTCGCTAGTA 754
Query 948 CTGATGAGAATGCTATGCTTAAAGCTACTGATTTTGGATTGTCTGTGTTCATTGAAGAAG 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 755 CTGATGAGAATGCTATGCTTAAAGCTACTGATTTTGGATTGTCTGTGTTCATTGAAGAAG 814
> AT4G04720.1 | Symbols: CPK21 | calcium-dependent protein kinase
21 | chr4:2394458-2397759 REVERSE LENGTH=2083
Length=2083
Score = 601 bits (325), Expect = 1e-170
Identities = 489/568 (86%), Gaps = 12/568 (2%)
Strand=Plus/Plus
Query 2060 AAGCATATTGATAGTGCTGTGTTATCTCGAATGAAGCAATTTCGAGCAATGAACAAACTT 2119
|||| ||||||||| ||||||||||| || ||||||||||| |||||||||||||| |||
Sbjct 1164 AAGCCTATTGATAGCGCTGTGTTATCCCGCATGAAGCAATTCCGAGCAATGAACAAGCTT 1223
Query 2120 AAGAAGCTAGCTCTTAAGGTTATTGCAGAGAGTCTCTCAGAAGAGGAAATTAAAGGTCTT 2179
|||||||||||||| |||||||| || |||||||| ||||||||||| ||||||||||||
Sbjct 1224 AAGAAGCTAGCTCTAAAGGTTATCGCGGAGAGTCTATCAGAAGAGGAGATTAAAGGTCTT 1283
Query 2180 AAAACAATGTTTGCGAATATGGATACCGATAAAAGCGGAACAATTACTTACGAAGAACTG 2239
||||| |||||||||||||| |||||||| |||||||| ||||| ||||| ||||||||
Sbjct 1284 AAAACCATGTTTGCGAATATAGATACCGACAAAAGCGGGACAATCACTTATGAAGAACTC 1343
Query 2240 AAAACCGGGCTGGCTAAACTTGGCTCTAAACTCACTGAAGCTGAAGTGAAGCAACTCATG 2299
||||| ||||| ||| |||||| |||| |||| | ||| ||||||| ||||||||||||
Sbjct 1344 AAAACTGGGCTAACTAGACTTGGGTCTAGACTCTCGGAAACTGAAGTTAAGCAACTCATG 1403
Query 2300 GAAGCCGCTGATGTAGATGGTAATGGAACAATAGACTACAT-CGAGTTTATCTCAGCGAC 2358
||||||||||| || ||||||||||||||||| |||||| | |||||||||||| |||||
Sbjct 1404 GAAGCCGCTGACGTCGATGGTAATGGAACAATCGACTAC-TACGAGTTTATCTCTGCGAC 1462
Query 2359 GATGCATAGATACAGATTTGATCGAGATGAACACGTATTCAAAGCCTTCCAATACTTCGA 2418
||||||||||||| ||| ||||||||||| || |||| |||||| |||||| |||| ||
Sbjct 1463 AATGCATAGATACAAATTAGATCGAGATGAGCATGTATACAAAGCATTCCAACACTTTGA 1522
Query 2419 CAAAGACAACAGCTGGTTTATCACAATG-GATGAGTTGG--AGTCAGCCATGAAAGAATA 2475
|||||||||||| || || || | | |||||||||| ||| |||||||| |||||
Sbjct 1523 TAAAGACAACAGCGGGCACATAACTA-GAGATGAGTTGGAAAGT--GCCATGAAGGAATA 1579
Query 2476 TGGTATGGGAGATGAAGCTAGCATCAAAGAAGTCATAGCGGAAGTCGATACAGATAATGA 2535
||| ||||||||||||||||||||||||||||| ||| | ||||| ||||| || |||||
Sbjct 1580 TGGAATGGGAGATGAAGCTAGCATCAAAGAAGTTATATCCGAAGTTGATACCGACAATGA 1639
Query 2536 TGGAAGAATAAACTATGAAGAATTTTGTGCCATGATGAGAAGTGGTATCACACTGCCAAC 2595
|||||||||||||| |||||||||||| || |||||||||||||| | ||| | |||| |
Sbjct 1640 TGGAAGAATAAACTTTGAAGAATTTTGCGCGATGATGAGAAGTGGCAGCACGCAGCCA-C 1698
Query 2596 ACAAGGGAA-CTTCTTCCAGTCCAATGA 2622
| ||||| || |||||| |||| |||
Sbjct 1699 AG--GGGAAACTGCTTCCATTCCATTGA 1724
Score = 167 bits (90), Expect = 6e-40
Identities = 150/179 (84%), Gaps = 3/179 (2%)
Strand=Plus/Plus
Query 829 CTCTGAGAAAGCAGCTGCTGGTGTTATTAGATCGATTTTGAATGTTGTTCAGATTTGCCA 888
|||||||| ||| ||||||||| | ||||| || ||| | ||||||||||||||||| ||
Sbjct 656 CTCTGAGAGAGCTGCTGCTGGTATCATTAGGTCTATTGTCAATGTTGTTCAGATTTGTCA 715
Query 889 TTTCATGGGAGTGATACATCTTGATCTTAAGCCTGAGAATTTCTTGCTAGCTAGTAGTAC 948
||| ||||| ||| | |||| ||||| |||||||||||||||||||| | | ||||
Sbjct 716 TTTTATGGGTGTGGTTCATCGAGATCTCAAGCCTGAGAATTTCTTGCT--TTCG-AGTAA 772
Query 949 TGATGAGAATGCTATGCTTAAAGCTACTGATTTTGGATTGTCTGTGTTCATTGAAGAAG 1007
|| ||||||||||||||||||||||||||||| || ||||| || ||||| |||||||
Sbjct 773 AGAGGAGAATGCTATGCTTAAAGCTACTGATTTCGGTTTGTCCGTCTTCATCGAAGAAG 831
> AT4G04740.2 | Symbols: CPK23 | calcium-dependent protein kinase
23 | chr4:2403609-2408737 REVERSE LENGTH=2518
Length=2518
Score = 409 bits (221), Expect = 8e-113
Identities = 400/486 (82%), Gaps = 14/486 (3%)
Strand=Plus/Plus
Query 2056 GGATAAGCATATTGATAGTGCTGTGTTATCTCGAATGAAGCAATTTCGAGCAATGAACAA 2115
||| |||| ||||||||| |||||||||| || ||||||||||| ||||||||||||||
Sbjct 1243 GGAAAAGCCTATTGATAGCACTGTGTTATCACGTATGAAGCAATTCCGAGCAATGAACAA 1302
Query 2116 ACTTAAGAAGCTAGCTCTTAAGGTTATTGCAGAGAGTCTCTCAGAAGAGGAAATTAAAGG 2175
|||||||||||||| || ||||||| || | |||||| || ||||| || || |||||
Sbjct 1303 GCTTAAGAAGCTAGCCCTAAAGGTTAGCGCGGTGAGTCTATCCGAAGAAGAGATCAAAGG 1362
Query 2176 TCTTAAAACAATGTTTGCGAATATGGATACCGATAAAAGCGGAACAATTACTTACGAAGA 2235
||||||||| |||||||||||||||||||| ||| |||||| ||||| ||||| ||| |
Sbjct 1363 TCTTAAAACCTTGTTTGCGAATATGGATACCAATAGAAGCGGGACAATCACTTATGAACA 1422
Query 2236 ACTGAAAACCGGGCT-GGCTAAACTTGGCTCTAAACTCACTGAAGCTGAAGTGAAGCAAC 2294
||| |||| ||||| | || |||| | |||| |||| ||||| ||||||| ||||||
Sbjct 1423 ACTCCAAACTGGGCTAAG-TAGACTTAGATCTAGACTCTCTGAAACTGAAGTTCAGCAAC 1481
Query 2295 TCATGGAAGCCG-CTGATGTAGATGGTAATGGAACAATAGACTAC-ATCGAGTTTATCTC 2352
|| | |||| || ||||||| ||||||||||||||||| |||||| || |||||||||||
Sbjct 1482 TCGTTGAAG-CGTCTGATGTGGATGGTAATGGAACAATTGACTACTAT-GAGTTTATCTC 1539
Query 2353 AGCGACGATGCATAGATACAGATTTGATCGA-GATGAACACGTATTCAAAGCCTTCCAAT 2411
||||| ||||||||||||| ||| ||| | ||||| |||||| |||||| ||||||
Sbjct 1540 TGCGACAATGCATAGATACAAATTACATC-ACGATGAGCACGTACACAAAGCATTCCAAC 1598
Query 2412 ACTTCGACAAAGACAACAGCT-GGTTTATCACAATGGATGAGTTGG--AGTCAGCCATGA 2468
|||| || |||||||| | | || || || | ||||||||||| ||| |||||||
Sbjct 1599 ACTTAGATAAAGACAA-AAATGGGCACATAACTAGGGATGAGTTGGAAAGT--GCCATGA 1655
Query 2469 AAGAATATGGTATGGGAGATGAAGCTAGCATCAAAGAAGTCATAGCGGAAGTCGATACAG 2528
| |||||||| ||||||||||||||||||||||||||||| ||| | ||||| || || |
Sbjct 1656 AGGAATATGGAATGGGAGATGAAGCTAGCATCAAAGAAGTTATATCCGAAGTTGACACCG 1715
Query 2529 ATAATG 2534
| ||||
Sbjct 1716 ACAATG 1721
> AT4G19210.1 | Symbols: ATRLI2, RLI2 | RNAse l inhibitor protein
2 | chr4:10501200-10505217 FORWARD LENGTH=2279
Length=2279
Score = 126 bits (68), Expect = 1e-27
Identities = 77/81 (95%), Gaps = 1/81 (1%)
Strand=Plus/Plus
Query 758 CAGGCTCCCAGTTCCAAGGCCGGGGCAGGTGCTAGGGTTGGTTGGAACAAATGGTATTGG 817
|||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||
Sbjct 412 CAGGCTCCCAGTTCCAAGACCAGGGCAGGTGCTAGGGTTGGTTGGAACCAATGGTATTGG 471
Query 818 AAAATCAACTGCTCTGAGAAA 838
||||||||||||||||| |||
Sbjct 472 AAAATCAACTGCTCTGA-AAA 491
Score = 86.1 bits (46), Expect = 2e-15
Identities = 50/52 (96%), Gaps = 0/52 (0%)
Strand=Plus/Plus
Query 674 CCAAATAAATTTCGCCAAGAGTGCAAGAAGAGTTGTCCTGTGGTCAAGACAG 725
||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 179 CCAAAGAAATGTCGCCAAGAGTGCAAGAAGAGTTGTCCTGTGGTCAAGACAG 230
> AT4G04710.1 | Symbols: CPK22 | calcium-dependent protein kinase
22 | chr4:2389598-2392887 REVERSE LENGTH=1728
Length=1728
Score = 121 bits (65), Expect = 4e-26
Identities = 116/140 (83%), Gaps = 6/140 (4%)
Strand=Plus/Plus
Query 2398 CAAAGCCTTCCAATACTTCGACAAAGACAACAGCTGGTTTATCACAATG-GATGAGTTGG 2456
|||||| |||||| |||| || |||||||||||| || || || | | ||||||||||
Sbjct 1527 CAAAGCATTCCAACACTTTGATAAAGACAACAGCGGGCACATAACTA-GAGATGAGTTGG 1585
Query 2457 --AGTCAGCCATGAAAGAATATGGTATGGGAGATGAAGCTAGCATCAAAGAAGTCATAGC 2514
||| || |||||||||||||| ||||||||||||||||||||||||||||| ||| |
Sbjct 1586 AAAGT--GCAATGAAAGAATATGGAATGGGAGATGAAGCTAGCATCAAAGAAGTTATATC 1643
Query 2515 GGAAGTCGATACAGATAATG 2534
||||| ||||| || ||||
Sbjct 1644 CGAAGTTGATACCGACAATG 1663
> AT3G13640.1 | Symbols: ATRLI1, RLI1 | RNAse l inhibitor protein
1 | chr3:4458461-4461733 REVERSE LENGTH=2197
Length=2197
Score = 100 bits (54), Expect = 6e-20
Identities = 68/75 (91%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 758 CAGGCTCCCAGTTCCAAGGCCGGGGCAGGTGCTAGGGTTGGTTGGAACAAATGGTATTGG 817
|||||| ||| ||||| |||||||||| || || ||||||||||||||||||||||||||
Sbjct 380 CAGGCTTCCAATTCCACGGCCGGGGCAAGTCCTTGGGTTGGTTGGAACAAATGGTATTGG 439
Query 818 AAAATCAACTGCTCT 832
|||||| ||||||||
Sbjct 440 AAAATCTACTGCTCT 454
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 131437390660
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5