BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg946067
Length=2419
Score E
Sequences producing significant alignments: (Bits) Value
AT4G21270.1 | Symbols: ATK1, KATA, KATAP | kinesin 1 | chr4:113... 3860 0.0
AT4G05190.1 | Symbols: ATK5 | kinesin 5 | chr4:2675101-2680214 ... 2156 0.0
> AT4G21270.1 | Symbols: ATK1, KATA, KATAP | kinesin 1 | chr4:11329363-11334135
REVERSE LENGTH=2849
Length=2849
Score = 3860 bits (2090), Expect = 0.0
Identities = 2311/2420 (95%), Gaps = 5/2420 (0%)
Strand=Plus/Plus
Query 3 AATTTTAGATTCTCGGAGATGGCTTCTCGTAACCAGAACCGTCCTCCTCGCAGTCCAAAC 62
|||||| || ||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 235 AATTTT-GAGTCTCGGAGATGGCTTCTCGCAACCAGAATCGTCCTCCTCGCAGTCCAAAC 293
Query 63 GCTAAAAAGGAAGGTCTCGGTGGCATTCCATTTGACAAGCGAAGGAAAGTGGAAACGCAA 122
|| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 294 GCCAAAAAGGAGGGTCTCGGTGGCATTTCATTTGACAAGCGAAGGAAAGTGGAAACGCAA 353
Query 123 -G-GG-ACTGGGAGAAGACAAGCGTTTTCGGCTGTGAACAAACAAGATGTCACGATGAAC 179
| || ||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 354 GGAGGTACTGGGAGAAGACAAGCTTTTTCGGCTGTGAATAAACAAGATGTCACGATGAAC 413
Query 180 AGCGATGTGGGGAGCATAGAAGAATGTGGTAAAGTTGAGTTTTCAAAAGATGAAGTATTG 239
|||||||| |||||||| |||||||||||||||||||| ||| ||||||||||| |||||
Sbjct 414 AGCGATGTAGGGAGCATTGAAGAATGTGGTAAAGTTGACTTTACAAAAGATGAAATATTG 473
Query 240 GCGTTGCTCAGTGAGAGAGCAAAAGCTGGAAAGTTTGATACAAAGGCTAAGATTGAGCAA 299
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 474 GCGTTGCTCAGTGAGAGAGCAAAAGCTGGAAAGTTTGATACTAAGGCTAAGATTGAGCAA 533
Query 300 ATGACGGATATTATCAAGAGGCTGAAGGTTTGTGTTAAATGGTTTCAACAAGCTGATGAA 359
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 534 ATGACGGATATTATCAAGAGGCTGAAGGTTTGTGTAAAATGGTTCCAACAAGCTGATGAA 593
Query 360 ACCCATGTCCAAGAGAAGGAAAGTTTGAGGGTTTCTTTGGAATCTGCGGAACAAAAATAC 419
|||||||||||||||||||||| ||||| |||||||||||||||| | ||||||||||||
Sbjct 594 ACCCATGTCCAAGAGAAGGAAAATTTGAAGGTTTCTTTGGAATCTTCAGAACAAAAATAC 653
Query 420 AACCACAAAGAGTTGGAGGCTAGGACAAAAGAGGAAGAGCTACATGCCACTATATCAAAT 479
|||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 654 AACCACAAAGAGTTGGAGGCTAGGACAAAAGAGGAAGAGCTACAGGCCACTATCTCAAAG 713
Query 480 TTGAAAGAGAATGTAGTGTCACTACATGAAAAGCTTGCAAAAGAGGAGTCTTGTAAACAG 539
||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||
Sbjct 714 TTGGAAGAGAATGTAGTGTCACTACATGAAAAGCTTGCAAAGGAGGAGTCTAGTACACAG 773
Query 540 GATGCCATTGAATGTCACAGAAGAGAAAAAGATTCTAGAGTTGCAGCTGAGAAAGTGCAG 599
|| |||||||||||||| |||||||||||||| |||||||||||||||| |||||||||
Sbjct 774 GACGCCATTGAATGTCATAGAAGAGAAAAAGAAGCTAGAGTTGCAGCTGAAAAAGTGCAG 833
Query 600 GCTTCTCTTGGAGAAGAACTTGATAAAGTTAAAGAAGAGAAAATGGCTGCCAAGCAGAAG 659
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 834 GCTTCTCTCGGAGAAGAACTTGATAAAGTTAAGGAAGAGAAAATGGCTGCCAAGCAGAAG 893
Query 660 GTGACGTCACTTGAGGATATGTACAAAAGGCTACAAGAGTACAACACAAGTTTGCAACAA 719
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 894 GTGACGTCACTTGAGGATATGTACAAAAGGCTGCAAGAGTACAACACAAGTTTGCAACAA 953
Query 720 TATAACAGCAAACTCCAGACTGATCTTGAAACAGTTCGAGCTGCACTCACACGTGCTGAA 779
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 954 TATAACAGCAAACTTCAGACTGATCTTGAAACAGTTCGAGCTGCACTCACACGTGCTGAA 1013
Query 780 AAAGAGAAGTCAAGCATCCTTGAGAATCTTAGTACACTAAGGGGTCACAGCAAGTCGCTG 839
|||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||
Sbjct 1014 AAAGAGAAGTCAAGCATCCTGGAGAATCTTAGTACACTTAGGGGACACAGCAAGTCGCTG 1073
Query 840 CAGGATCAATTAGCTTCAAGCAGAGTTTTGCAAGATGACGCTATAAAACAGAAGGATTCA 899
||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1074 CAGGATCAACTATCTTCAAGCAGAGTGTTGCAAGATGACGCTATAAAACAGAAGGATTCA 1133
Query 900 TTGCTTTTGGAAGTTACTAATCTCCGGAATGAGCTCCAACAAGTTAGGGATGACCGTGAT 959
||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 1134 TTGCTTTCGGAAGTTACTAATCTTCGGAATGAGCTCCAACAAGTCCGGGATGACCGTGAT 1193
Query 960 CGCCAAGTTGTTCAGTCACAGAAGCTGGCTGAGGAAATCGGGAAATACCAGGAGAATGTC 1019
||||||||||| ||||||||||||||| ||||||| ||| |||| |||||||||||||||
Sbjct 1194 CGCCAAGTTGTACAGTCACAGAAGCTGTCTGAGGAGATCAGGAAGTACCAGGAGAATGTC 1253
Query 1020 GGAAAGTCATCGCAAGAGCTAGACATCTTGATAGCAAAATCAGGATCGTTGGAGGAGACA 1079
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1254 GGAAAGTCATCGCAAGAGCTAGACATCTTGACAGCAAAATCAGGATCGTTGGAGGAGACA 1313
Query 1080 TGTTCGTTGCAAAAGGAGCGTATAAATATGTTAGAGCAGCAATTAGCAATCGCCAGTGAA 1139
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 1314 TGTTCGTTGCAGAAGGAGCGTTTAAATATGTTAGAGCAGCAATTAGCAATCGCCAATGAA 1373
Query 1140 AGGCAAAAGATGGCAGATGCATCAGTATCTCTTACTAGAACAGAGTTTGAGGAGCAGAAG 1199
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1374 AGGCAAAAGATGGCAGATGCATCAGTATCTCTTACTAGGACAGAGTTTGAGGAGCAGAAG 1433
Query 1200 CATCTACTGTGTGAACTACAAGACCGCCTTGCAGACATGGAGCATCAACTGTGTGAGGCA 1259
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 1434 CATCTACTGTGCGAACTACAAGACCGGCTTGCAGACATGGAGCATCAACTGTGTGAGGGA 1493
Query 1260 GAGTTATTGCGGAAGAAGCTTCATAACACTATTCTTGAACTAAAAGGAAATATACGGGTC 1319
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 1494 GAGTTATTGCGGAAGAAGCTTCATAACACTATTCTTGAATTAAAAGGAAATATACGTGTC 1553
Query 1320 TTCTGCCGAGTGCGCCCCTTGTTACCAGACGATGGAGGACGACATGAAGCAACTGTGATA 1379
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1554 TTCTGCCGAGTGCGTCCCTTGTTACCAGACGATGGAGGACGACATGAAGCAACTGTAATA 1613
Query 1380 GCCTATCCTACTTCAACAGAAGCTCGAGGAAGAGGTGTTGATTTGGTTCAGAGTGGGAAC 1439
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 1614 GCCTATCCTACTTCAACAGAAGCCCAAGGAAGAGGTGTTGATTTGGTTCAGAGTGGGAAC 1673
Query 1440 AAACATCCTTTCACCTTTGACAAAGTTTTCAATCACGAAGCTTCCCAGGAGGAAGTATTC 1499
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1674 AAACATCCTTTCACCTTTGACAAAGTTTTCAACCACGAAGCTTCCCAGGAGGAAGTATTC 1733
Query 1500 TTTGAAATATCACAACTAGTACAGAGCGCACTGGATGGCTATAAGGTTTGTATCTTTGCC 1559
||||||||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||
Sbjct 1734 TTTGAAATATCTCAACTTGTACAGAGTGCATTGGATGGCTATAAGGTTTGTATCTTTGCC 1793
Query 1560 TACGGTCAGACAGGTTCTGGCAAGACCTACACCATGATGGGCAGGCCTGAGACGCCAGAA 1619
||||||||||| |||||||| ||||||||||||||||||||| |||||||| |||||||
Sbjct 1794 TACGGTCAGACCGGTTCTGGAAAGACCTACACCATGATGGGCCGGCCTGAGGCGCCAGAT 1853
Query 1620 CAGAAAGGTCTGATCCCTCGATCACTTGAACAGATATTCCAAGCCAGTCAATCTCTCGGT 1679
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1854 CAGAAAGGACTGATCCCTCGATCACTTGAACAGATATTCCAAGCCAGTCAATCACTCGGT 1913
Query 1680 GCACAAGGCTGGAAGTACAAAATGCAGGTATCAATGTTGGAGATATATAATGAGACCATC 1739
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 1914 GCACAAGGCTGGAAGTACAAGATGCAGGTATCGATGTTGGAGATATATAATGAGACCATC 1973
Query 1740 AGAGATTTGCTCTCTACAAATCGAACAACTTCTATGGAGTTGGTGCGAGCAGACAGTGGC 1799
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1974 AGAGATTTGCTCTCTACAAATCGAACAACTTCTATGGACTTGGTGCGAGCAGACAGTGGC 2033
Query 1800 ACCTCAGGAAAGCAATATACAATCACTCATGACGTAAATGGACACACCCATGTCAGCGAC 1859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2034 ACCTCAGGAAAGCAATATACAATCACTCATGACGTAAATGGACACACCCATGTCAGCGAC 2093
Query 1860 TTGACCATATTTGATGTGTGCAGCATTGGAAAGATATCCTCACTCTTGCAGCAGGCTGCT 1919
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2094 TTGACCATATTTGATGTGTGCAGCGTTGGAAAGATATCCTCACTCTTGCAGCAGGCTGCT 2153
Query 1920 CAGAGCAGGTCAGTAGGGAAGACTCAAATGAATGAGCAATCATCCAGAAGTCATTTTGTG 1979
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 2154 CAGAGCAGGTCAGTAGGGAAGACTCAAATGAATGAGCAATCATCTAGAAGTCATTTCGTG 2213
Query 1980 TTTACTATGCGGATTTCGGGTGTTAATGAGAGCACTGAACAGCAGGTACAAGGGGTTCTC 2039
||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 2214 TTTACTATGAGGATTTCAGGTGTTAATGAGAGCACCGAACAGCAGGTACAAGGTGTTCTC 2273
Query 2040 AACCTAATCGATCTTGCTGGAAGTGAGAGGCTATCAAAGAGTGGGGCAACTGGAGATCGA 2099
|||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 2274 AACCTAATAGATCTTGCTGGAAGCGAGAGGCTATCGAAGAGTGGGGCAACTGGAGATCGA 2333
Query 2100 TTAAAAGAGACACAGGCTATAAACAAAAGTTTATCAGCTTTGAGTGATGTTATCTTTGCA 2159
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 2334 TTAAAAGAGACACAGGCTATAAACAAAAGTTTATCAGCTTTGAGTGATGTAATATTTGCA 2393
Query 2160 TTGGCTAAGAAAGAAGATCATGTTCCTTTCAGAAACTCAAAGCTAACATATCTGCTTCAG 2219
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2394 TTGGCTAAGAAAGAAGATCATGTTCCTTTCAGAAACTCAAAGCTAACATATCTGCTCCAG 2453
Query 2220 CCTTGCCTAGGAGGAGATTCGAAGACCTTGATGTTCGTAAACATTTCGCCTGACCCATCT 2279
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct 2454 CCTTGCCTAGGAGGAGATTCAAAGACCTTGATGTTCGTAAACATTTCGCCTGACCCAACT 2513
Query 2280 TCCGCTGGAGAGTCTCTTTGCTCTCTCCGGTTTGCTGCTAGAGTGAATGCGTGTGAAATT 2339
|| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 2514 TCTGCTGGAGAGTCTCTTTGCTCACTCCGGTTTGCTGCTAGAGTAAATGCGTGTGAAATT 2573
Query 2340 GGTATACCTAGGAGACAAACTTCAACAAAGCTCCTTGACTCTCGCTTGAGCTATGGCTAA 2399
|||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 2574 GGTATACCTAGGCGACAAACTTCAACGAAGCTCCTTGACTCTCGCTTAAGCTATGGCTAA 2633
Query 2400 AACTGTTCATAAAAATCTGC 2419
|| |||||| || | |||||
Sbjct 2634 AAATGTTCAGAAGA-TCTGC 2652
> AT4G05190.1 | Symbols: ATK5 | kinesin 5 | chr4:2675101-2680214
FORWARD LENGTH=3132
Length=3132
Score = 2156 bits (1167), Expect = 0.0
Identities = 1984/2377 (83%), Gaps = 61/2377 (3%)
Strand=Plus/Plus
Query 54 AGTCCAAACGCT-AAAAAGGAAG-GTCTCGGTGGCATTCCATTTGACAAGCGAAGGAAAG 111
|||||||||| | |||||||||| | ||| | ||||| ||||||||||||||| ||
Sbjct 274 AGTCCAAACG-TCAAAAAGGAAGCG-CTCTCAAGTATTCCTTTTGACAAGCGAAGG-AA- 329
Query 112 TGGAAACGCAAGGGACTGGGAGAAGACAAGCGTTTTCGGCTGTGAACAAACAAGATGTCA 171
||| |||||||| ||||| |||||||||| | ||||| | ||||||| ||||||||
Sbjct 330 -GGAGACGCAAGGTACTGGAAGAAGACAAGTGCTTTCGACAGTGAACAGACAAGATG--- 385
Query 172 CGATGAACAGCGATGTGGGGAGCATAGAAGAATGTGGTAAAGTTGAGTTTTCAAAAGATG 231
| ||||||||||||||| |||| ||| || |||||||||||||||||| |||||||||
Sbjct 386 C---GAACAGCGATGTGGGAAGCACAGAGGAGTGTGGTAAAGTTGAGTTTACAAAAGATG 442
Query 232 AAGTATTGGCGTTGCTCAGTGAGAGAGCAAAAGCTGGAAAGTTTGATACAAAGGCTAAGA 291
|||| ||||| ||||| | |||||||| ||||||||||| |||||||| |||| |||||
Sbjct 443 AAGTGTTGGCTTTGCTTAACGAGAGAGCTAAAGCTGGAAAATTTGATACCAAGGGTAAGA 502
Query 292 TTGAGCAAATGACGGATATTATCAAGAGGCTGAAGGTTTGTGTTAAATGGTTTCAACAAG 351
||||||||||||||||||||||||||| ||| ||||| ||||||| ||||| |||||||
Sbjct 503 TTGAGCAAATGACGGATATTATCAAGAAGCTTAAGGTCTGTGTTAGATGGTACCAACAAG 562
Query 352 CT-GATGAAACCCATGTCCAAGAGAAGGAAAGT-TTGAGGGT-TTCT-TTGGAATCTGCG 407
| |||||||| ||||| ||||| ||||||| | || | |||| || |||||||
Sbjct 563 -TGGATGAAACTCATGTTCAAGACAAGGAAAATCTT--TCTTCTTCTCTT-CAATCTGCA 618
Query 408 GAACAAAA-ATACAACCACAAAGAGTTGGAGGCTAGGACAAAAGAGGAAGAGCTAC-ATG 465
| | |||| ||||| | ||||||||||| || | ||| |||||||||||||||| | |
Sbjct 619 G-AGAAAAGATACAGTGATAAAGAGTTGGATGCAAAGACCAAAGAGGAAGAGCTACGA-G 676
Query 466 CCACTATATCAAATTTGAAAGAGAATGTAGTGTCACTACATGAAAAGCTTG-CAAAAGAG 524
| |||||| || | |||| ||||| ||| ||||| || ||||||| || | || |||
Sbjct 677 CAACTATAACAGAGATGAAGGAGAACATAGAATCACTTCAGGAAAAGC-TGTCCAAGGAG 735
Query 525 GAGTCT-TGTAAACAGGATGCCATTGAATGTCACAGAAGAGAAAAAGATTCTAGAGTTGC 583
||| | |||||| |||||| |||||| |||||||||||||||||||| ||||||||
Sbjct 736 AAGT-TGAGTAAACTGGATGCAATTGAAAATCACAGAAGAGAAAAAGATTGTAGAGTTGT 794
Query 584 AGCTGAGAAAG-TGCAGGCTTCTCTTGGAGAAGAACTTGATAAAGTTAAAGAAGAGAAAA 642
||||||| ||| | |||| |||||| ||||||| ||||| ||||||||||| || ||||
Sbjct 795 AGCTGAG-AAGCTTCAGGTTTCTCTCAGAGAAGAGCTTGACAAAGTTAAAGAGGAAAAAA 853
Query 643 TGGCTGCCAAGCAGAAGGTGACGTCACTTGAGGATATGTACAAAAGGCTACAAGAGTACA 702
||||||| ||||||||||||||||| || || ||||||||||| ||||| ||||||||||
Sbjct 854 TGGCTGCGAAGCAGAAGGTGACGTCTCTAGAAGATATGTACAAGAGGCTGCAAGAGTACA 913
Query 703 ACACAAGTTTGCAACAATATAACAGCAAACTCCAGACTGATCTTGAAACAGTTCGAGCTG 762
|||||||||||||||||||||||| |||||||||||||||||||||| || | ||| |
Sbjct 914 ACACAAGTTTGCAACAATATAACACCAAACTCCAGACTGATCTTGAAGTAGCTAGAGAGG 973
Query 763 CACTCACACGTGCTGAAAAAGAGAAGTCAAGCATCCTTGAGAATCTTAGTACACTAAGGG 822
| | ||| |||||||||||||| |||||||| || || |||||||||| ||||||||| |
Sbjct 974 CTCACACTCGTGCTGAAAAAGAAAAGTCAAGTATACTGGAGAATCTTACTACACTAAGAG 1033
Query 823 GTCACAGCAAGTCGCTGCAGGATCAATTAGCTTCAAGCAGAGTTTTGCAAGATGACGCTA 882
||||||| || || || || ||||||||||| || ||| | |||| |||||||| ||
Sbjct 1034 GTCACAGTAAATCACTACAAGATCAATTAGCATCGAGCCGGGTTTCACAAGATGAAGCGG 1093
Query 883 TAAAACAGAAGGATTCATTGCTTTTGGAAGTTACTAATCTCCGGAAT-GAGCTCCAACAA 941
||||||| |||||||||||||| ||||||||| ||| || | || ||||| ||||||
Sbjct 1094 TAAAACAAAAGGATTCATTGCTGATGGAAGTTAATAACCTTCA-AAGCGAGCTGCAACAA 1152
Query 942 GTTAGGGATGACCGTGATCGCCAAGTTGTTCAGTCACAGAAGCTGGCTGAG-GAAAT-CG 999
|| | ||||| ||||||||||| ||||| |||||||| |||||||||| | || || |
Sbjct 1153 GTCCGTGATGATCGTGATCGCCATGTTGTACAGTCACAAAAGCTGGCTG-GTGAGATACT 1211
Query 1000 GGAAATACCAGGAGAATGTCGGAAAGTCATCGCAAGAGCTAGACAT-CTTGATAGCAAAA 1058
| | || |||||| ||| ||||||||||| || ||| | ||||| ||| ||||| |||
Sbjct 1212 G-ATGTATAAGGAGAGTGTTGGAAAGTCATCTCATGAGTTGGACATTCTT-ATAGCCAAA 1269
Query 1059 TCAGGATCGTTGGAGGAGACATGTTCGTTGCAAAAGGAGCGTAT-AAATATGTTAGAGCA 1117
|||||||| || ||||| ||||||||||||||||| |||||||| ||| ||||| |||||
Sbjct 1270 TCAGGATCTTTAGAGGAAACATGTTCGTTGCAAAAAGAGCGTATTAAA-ATGTTGGAGCA 1328
Query 1118 GCAATTAGCAATCGCCA-GTGAAAGGCAAAAGATGGCAGATGCATC-AGTATCTCTTACT 1175
| ||||||| | || | | |||| || ||||||| ||| ||| | | |||| |||
Sbjct 1329 GGAATTAGCTTTTGCTAAG-GAAAAGCTTAAGATGGTGGATTTATCTA-TGTCTCATACA 1386
Query 1176 A-GAACAGAGTTTGAGGAGCAGAAGCA-TCTACTGTGTGAACTACAAGACCGCCTTGCAG 1233
| || |||| |||||||||||||| || | || || |||||| ||||| ||||||||||
Sbjct 1387 ATGA-CAGAATTTGAGGAGCAGAAACAATGTA-TGCATGAACTGCAAGATCGCCTTGCAG 1444
Query 1234 ACATGGAGCATCAACTGTGTGA-GGCAGAGTTATTGCGGAAGAAGCTTCATAACACTATT 1292
||| ||||| |||||| | ||| || ||||||||| |||| |||||||||||||| |||
Sbjct 1445 ACACGGAGCGTCAACTTTTTGAAGG-AGAGTTATTAAGGAAAAAGCTTCATAACACCATT 1503
Query 1293 CTTGAACTAAAAGGAAATATACGGGTCTTCTGCCGAGTGCGCCCCTTGTTACCAGACGAT 1352
|||||||| |||||||| ||||| || ||||||||||||||||||||| ||||||| |||
Sbjct 1504 CTTGAACTCAAAGGAAACATACGCGTGTTCTGCCGAGTGCGCCCCTTGCTACCAGATGAT 1563
Query 1353 GGAGGACGACATGAAGCAACTGTGATAGCCTATCCTACTTCAACAGAAGCTCGAGGAAGA 1412
|||||||| || || || | ||| || ||||||||||| ||||| ||| ||| || |||
Sbjct 1564 GGAGGACGCCAAGAGGCCAGTGTTATTGCCTATCCTACATCAACTGAATCTCTTGGTAGA 1623
Query 1413 GGTGTTGATTTGGTTCAGAGTGGGAACAAACATCCTTTCACCTTT-GACAAAGTTTTCAA 1471
|| ||||| |||| || ||||| ||||||||||||||||| ||| ||||| || ||| |
Sbjct 1624 GGCATTGATGTGGTCCAAAGTGGTAACAAACATCCTTTCAC-TTTCGACAAGGTCTTCGA 1682
Query 1472 TCACGAAGCTTCCCAGGAGGAAGTATTCTTTGAAATATCACAACTAGTACAGAGCGCACT 1531
|||| |||||| |||||||||||||||||||||||||| ||||| || ||||||||| |
Sbjct 1683 CCACGGAGCTTCTCAGGAGGAAGTATTCTTTGAAATATCTCAACTTGTGCAGAGCGCATT 1742
Query 1532 GGATGGCTATAAGGTTTGTATCTTTGCCTACGGTCAGACAGGTTCTGGCAAGACCTACAC 1591
||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct 1743 GGATGGCTACAAGGTTTGTATTTTTGCCTACGGTCAGACAGGTTCTGGCAAAACCTATAC 1802
Query 1592 CATGATGGGCAGGCCTGAGACGCCAGAACAGAAAGGTCTGATCCCTCGATCACTTGAACA 1651
|||||||||||||||||| || |||||||||||||| ||||||||||||||||| |||||
Sbjct 1803 CATGATGGGCAGGCCTGAAACACCAGAACAGAAAGGACTGATCCCTCGATCACTCGAACA 1862
Query 1652 GATATTCCAAGCCAGTCAATCTCTCGGTGCACAAGGCTGGAAGTACAAAATGCAGGTATC 1711
|||||| || |||| ||| ||| || ||||||||||||| ||||| |||||||| ||
Sbjct 1863 AATATTCAAAACCAGCCAAAGTCTTAGTACACAAGGCTGGAAATACAAGATGCAGGTCTC 1922
Query 1712 AATGTTGGAGATATATAATGAGACCATCAGAGATTTGCTCTCTACAAATCGAACAACTT- 1770
|||||||||||||||||||||| |||||||||| ||| | ||||||| ||||| | ||
Sbjct 1923 AATGTTGGAGATATATAATGAGTCCATCAGAGACTTGTTGTCTACAAGCCGAACGA-TTG 1981
Query 1771 CTATGGAGT-TGGTGCGAGCAGACAGTGGCACCTCAGGAA-AGCAATATACAATCACTCA 1828
|||| || | || |||| ||||||||| |||| || |||| | |||||||||||||| ||
Sbjct 1982 CTATAGAATCTG-TGCGGGCAGACAGTAGCACATCTGGAAGA-CAATATACAATCACACA 2039
Query 1829 TGACGTAAATGGACACACCCATGTCAGCGACTTGACCATATTTGATGTGTGCAGCATTGG 1888
||| || |||||| |||| ||||| |||||| |||| ||| | ||||| |||||||||||
Sbjct 2040 TGATGTTAATGGAAACACTCATGTTAGCGACCTGACAATAGTAGATGTATGCAGCATTGG 2099
Query 1889 A-AAGATATCCTCACTCTTGCAGCAGGCTGCTCAGAGCAGGTCAGTAGGGAAGACTCAAA 1947
| || || |||||||| ||||| || ||||||||||||||||| || |||||||| || |
Sbjct 2100 ACAA-ATTTCCTCACTTTTGCAACAAGCTGCTCAGAGCAGGTCTGTTGGGAAGACGCATA 2158
Query 1948 TGAATGAGCAATCATCCAGAAGTCATTTTGTGTTTACTATGCGGATTTCGGGTGTTAATG 2007
||||||| |||||||| ||||||||||| ||||||||| | ||||||| ||||| ||||
Sbjct 2159 TGAATGAACAATCATCAAGAAGTCATTTCGTGTTTACTCTTAGGATTTCTGGTGTGAATG 2218
Query 2008 AGAGCACTGAACAGCAGGTACAAGGGGTTCTCAACCTAATCGATCTTGCTGGAAGTGAGA 2067
|||||||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||
Sbjct 2219 AGAGCACTGAACAGCAAGTACAAGGTGTTCTTAACCTAATTGATCTTGCTGGAAGTGAGC 2278
Query 2068 GGCTATCAAAGAGTGGGGCAACTGGAGATCGATTAAAAGAGACACAGGCTATAAACAAAA 2127
| || |||| ||| |||||||| ||||| || ||||| ||||||||||||||||||||||
Sbjct 2279 GACTTTCAAGGAGCGGGGCAACCGGAGACCGGTTAAAGGAGACACAGGCTATAAACAAAA 2338
Query 2128 GTTTATCAGCTTTGAGTGATGTTATCTTTGCATTGGCTAAGAAAGAAGATCATGTTCCTT 2187
| || || || |||||||||||||| ||||||||||| |||||||| |||||||| ||||
Sbjct 2339 GCTTGTCTGCATTGAGTGATGTTATATTTGCATTGGCAAAGAAAGAGGATCATGTACCTT 2398
Query 2188 TCAGAAACTCAAAGCTAACATATCTGCTTCAGCCTTGCCTAGGAGGAGATTCGAAGACCT 2247
|||||||||||||| ||||||||||||| ||||| || ||||||| || || |||||||
Sbjct 2399 TCAGAAACTCAAAGTTAACATATCTGCTCCAGCCATGTTTAGGAGGGGACTCAAAGACCT 2458
Query 2248 TGATGTTCGTAAACATTTCGCCTGACCCATCTTCCGCTGGAGAGTCTCTTTGCTCTCTCC 2307
| ||||| || ||||| || ||||| |||||||| ||||||||||||| |||||||| |
Sbjct 2459 TAATGTTTGTGAACATATCACCTGATCCATCTTCAACTGGAGAGTCTCTATGCTCTCTTC 2518
Query 2308 GGTTTGCTGCTAGAGTGAATGCGTGTGAAATTGGTATACCTAGGAGACAAACTTCAACAA 2367
|||||||||||||||| ||||| ||||| ||||| |||||| | ||||||||||| |||
Sbjct 2519 GGTTTGCTGCTAGAGTTAATGCATGTGAGATTGGAATACCTCGCAGACAAACTTCCGCAA 2578
Query 2368 AGCTCCTTGACTCTCGCTTGAGCTATGGCTAAAACTG 2404
| ||||| ||||||||| | || || || ||| ||||
Sbjct 2579 AACTCCTCGACTCTCGCCTAAGTTACGGTTAACACTG 2615
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 120129904185
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5