BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg946092 Length=626 Score E Sequences producing significant alignments: (Bits) Value AT4G21080.1 | Symbols: | Dof-type zinc finger domain-containin... 200 1e-50 > AT4G21080.1 | Symbols: | Dof-type zinc finger domain-containing protein | chr4:11254602-11255351 REVERSE LENGTH=750 Length=750 Score = 200 bits (108), Expect = 1e-50 Identities = 247/311 (79%), Gaps = 22/311 (7%) Strand=Plus/Plus Query 22 ATGGATACCTTGAATGTTTTTGCAAATGAAGACAATCAAGTGAATGTTGTGAAG----C- 76 ||||||| |||||||||||| ||||||||||||||||||||||||| ||||||| | Sbjct 1 ATGGATAACTTGAATGTTTTCGCAAATGAAGACAATCAAGTGAATGATGTGAAGCCCCCA 60 Query 77 CC-CCACCA---CGAGTATGTCCAAGGTGTTATTCCGATCAA-ACAAAATTCTGCTACTT 131 || |||||| ||||| ||| |||||||| |||| ||| || || ||||| || || || Sbjct 61 CCACCACCACCTCGAGTGTGTGCAAGGTGTGATTCTGAT-AATACTAAATTTTGTTA-TT 118 Query 132 -CAACAACTAC-AAAACGTCTCAACCACGCTACAAATGCAAGGACTGTCGTAGATACTGG 189 |||||||||| | || ||| ||||| ||| |||||| ||||||||||||||||| Sbjct 119 ACAACAACTACTGTGA-GTTTCAGCCACGATACTTCTGCAAGAACTGTCGTAGATACTGG 177 Query 190 ACTCATGGTGGAGCTTTAAGGAACATACCAATCGGTGGAAGTTGCCGTAAATCCAAGCTT 249 ||||||||||| |||||||| ||||||||||| ||||||||| | ||| |||| | Sbjct 178 ACTCATGGTGGGGCTTTAAGAAACATACCAATTGGTGGAAGTAGTCGTG---CCAAACGG 234 Query 250 CCAAAGATTGATCAATCTTCAGTTTCTCAAATGGCTTCTGTTGAGATTCAACCGAG-TAA 308 ||| | | ||||| |||| ||| ||| |||| ||||||||||| |||| ||| ||| Sbjct 235 GCAAGGGTAAATCAACCTTCGGTTGCTCGGATGGTTTCTGTTGAGACCCAAC-GAGGTAA 293 Query 309 TCA-TCAACCT 318 || ||||||| Sbjct 294 -CAATCAACCT 303 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 30190722347 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5