BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg946222

Length=748
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G19570.1 | Symbols:  | Chaperone DnaJ-domain superfamily pro...  67.6    2e-10


> AT4G19570.1 | Symbols:  | Chaperone DnaJ-domain superfamily protein 
| chr4:10665294-10667318 FORWARD LENGTH=1892
Length=1892

 Score = 67.6 bits (36),  Expect = 2e-10
 Identities = 40/42 (95%), Gaps = 0/42 (0%)
 Strand=Plus/Plus

Query  702   GATGACAACAGGAAATGCAAACTCTAATCTTGACGCACAGAG  743
             ||||||||||||||||||||||||||||||||| || |||||
Sbjct  1673  GATGACAACAGGAAATGCAAACTCTAATCTTGAAGCGCAGAG  1714



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 36319288281


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5