BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg946241 Length=2219 Score E Sequences producing significant alignments: (Bits) Value AT4G19380.1 | Symbols: | Long-chain fatty alcohol dehydrogenas... 3446 0.0 > AT4G19380.1 | Symbols: | Long-chain fatty alcohol dehydrogenase family protein | chr4:10568365-10572412 REVERSE LENGTH=2367 Length=2367 Score = 3446 bits (1866), Expect = 0.0 Identities = 2107/2225 (95%), Gaps = 9/2225 (0%) Strand=Plus/Plus Query 1 ACTCACTGACACCACGTGAGATGGAATCTCTAGTTGCGATCTGCGATACCTTCATTTCCT 60 |||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct 105 ACTCACTGACGCCACGTGAGATGGAATCTCTTGTTGCGATCTGCGATACCTTCATATCCT 164 Query 61 CCATCGACGGCTCTGGAGTAGGACACGTGGATGATTGCGTCGCTGGATATTTTTCCGCCT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 165 CCATCGACGACTCTGGAGTAGGACACGTGGATGATTGCGTCGCTGGATATTTCTCCGCCT 224 Query 121 CCGCTTCTCAGACCGGAACTCCTGACCGCGTGGCGAGGTTGATGAGTGAGAGACTTCACC 180 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 225 CCGCTTCTCAGACCGGAACTCCCGACCGCGTGGCGAGGTTAATGAGTGAGAGACTTCACC 284 Query 181 ACCCAAAGAAGTGGATACTAAGAGCTGGATTGTGGTTACTCTCTACTTGGATCGGAACTC 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 285 ACCCAAAGAAGTGGATACTAAGAGCTGGATTGTGGTTACTCTCTACTTGGATCGGAAGTC 344 Query 241 TAATCTTGTGTGGTCGGAGAAGTTTCACCGGCGAGTTTCCTTACTTCCGGAGATTCTGCC 300 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 345 TAGTCTTGTGTGGTTGGAGAAGTTTCACCGGCGAGTTTCCTTACTTCCGGAGATTCTGCC 404 Query 301 GGCTTCCGGAGAAACAGAGAGAAGAGATATTGCTGAATTGGTCTTCAAGCTATTTCTCAC 360 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 405 GGCTTCCGGAGAAACGGAGAGAAGAGATATTGCTGAATTGGTCTTCAAGCTATTTCTCAC 464 Query 361 TCCTTAGAATGTTCTTTAGGTCCATCAAACTTATCACTGCCTTTGTCTTCTTCACTCAGG 420 | ||||||||||| |||||| ||||||||||||| | |||| |||||||||||||||||| Sbjct 465 TTCTTAGAATGTTATTTAGGACCATCAAACTTATAAGTGCCCTTGTCTTCTTCACTCAGG 524 Query 421 TTGATGAAAAAGGAAGGAACTTGGCGTGGAAAGCAATAAGTTACAATGGACCCAGCTCTG 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 525 TTGATGAAAAAGGAAGGAACTTGGCGTGGAAAGCAATAGGTTACAATGGACCCAGCCCTG 584 Query 481 ATCATAGTGATCATGAAGTAGAACT-AA--ATGAGAAGATGCAGAAGAAACGTGAGGAGA 537 ||||||||||||||||||||||||| || | ||||||| | ||||||||| |||||||| Sbjct 585 ATCATAGTGATCATGAAGTAGAACTAAACGAGGAGAAGAAGAAGAAGAAACCTGAGGAGA 644 Query 538 TCTTTGGACCACTTTACAATGGCATCATCGATCTACAAAGCCCTAGAGAAGCCGTGGCAA 597 |||||||||||||||||||||||||| | |||||| ||||||||||||||||||||| || Sbjct 645 TCTTTGGACCACTTTACAATGGCATCGTTGATCTAAAAAGCCCTAGAGAAGCCGTGGAAA 704 Query 598 AGAAGTTAACCGGTCATGGATTCACAGTTTCAACTCAAAAGAGGAACACAAACGGATCAT 657 ||||| || |||||| ||| ||| ||||||||| |||||||||||| ||||||||||||| Sbjct 705 AGAAGCTAGCCGGTCGTGGGTTCGCAGTTTCAAATCAAAAGAGGAATACAAACGGATCAT 764 Query 658 CTATCTCTGACCCGGTGATGACAATCCGGTGTGATGCTGTGGTGGTTGGGTCTGGATCCG 717 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 765 CTATCTCTGACCCGGTGATGAAAATCCAGTGTGATGCTGTGGTGGTTGGGTCTGGATCCG 824 Query 718 GTGGAGGAGTAGTGGCTGGAGTTTTAGCCAAGGCGGGTTATAAAGTATTGGTGGTGGAGT 777 |||||||||| | ||| ||||| ||||||||||| ||||| ||||| |||||| | |||| Sbjct 825 GTGGAGGAGTGGCGGCAGGAGTGTTAGCCAAGGCTGGTTACAAAGTGTTGGTGATTGAGT 884 Query 778 CAGGGAATTACTATGCAAGAAGCAAACTTTCTTTACTTGAAGGGCAAGCAATGGATGATA 837 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 885 CAGGGAATTACTATGCAAGAAGCAAACTTTCTTTACTTGAAGGGCAAGCTATGGATGACA 944 Query 838 TGTACTTATCCGGTGGGTTATTAGCGACGTCTGACACGAACGTAGTGATTCTTGCGGGGT 897 |||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| | Sbjct 945 TGTATTTATCCGGTGGGTTATTAGCGACGTCCGATACGAACGTAGTGATTCTTGCGGGAT 1004 Query 898 CCACGGTCGGAGGTGGTTCGACAATCAATTGGTCCGCCTCGATCAAGACACCGGAACATG 957 |||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 1005 CCACAGTCGGAGGTGGTTCTACAATCAATTGGTCCGCCTCGATCAAGACACCAGAACATG 1064 Query 958 TGATGAAGGAATGGGCAGAAAAATCAAAACTCGAAATGTTCGGAAGTAATTTGTATCGAG 1017 |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct 1065 TGATGAAGGAATGGGCAGAAAAGTCAAAACTCGAAATGTTCGGAAGTGATTTGTATCGAG 1124 Query 1018 AGGCAATGGATGTTGTCTGTGAGAGAATGGGTGTTCAATGCGGATTTGTAGAAGAAGGGT 1077 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct 1125 AGGCAATGGATGTTGTCTGTAAGAGGATGGGTGTTCAATGCGGATTTGTAGAAGAAGGGT 1184 Query 1078 TTAATAATGAGATATTGAGAAAGGGTTGTGAAGAGTTAGGGTTACCAGTAAAGAATATTC 1137 ||||||||||| |||||||||| ||||||||| |||||||||||||||| |||||||||| Sbjct 1185 TTAATAATGAGGTATTGAGAAAAGGTTGTGAAAAGTTAGGGTTACCAGTGAAGAATATTC 1244 Query 1138 CGAGGAATGCTCCATCCGATCATTACTGTGGGTTTTGCTGCTTGGGATGCAAGAAAGGTC 1197 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 1245 CGAGGAATGCTCCATCCGATCATTACTGTGGGTTTTGTTGCTTGGGTTGCAAGAAAGGTC 1304 Query 1198 AAAAGCAAGGGACTTCAGAGACATGGCTTGTAGATTTGGTGGAATCTGGTAACGGTTTAA 1257 ||||||| |||||||||||||| ||||||||||||||||||||||||| ||| ||||||| Sbjct 1305 AAAAGCAGGGGACTTCAGAGACTTGGCTTGTAGATTTGGTGGAATCTGATAATGGTTTAA 1364 Query 1258 TCCTTCCAGGTTGTGAAGCGATGGAAGTCTTGTACGACTGTGGAA-GGGGGAAGAAGAAG 1316 |||||||||||||| |||||| ||||||| ||||||||||| ||| ||||||||||||| Sbjct 1365 TCCTTCCAGGTTGTCAAGCGACGGAAGTCATGTACGACTGT-GAACAGGGGAAGAAGAAG 1423 Query 1317 AAGGCGACTGGAGTTGCGTTTGCATATGGGGAAGAGATTTATGTGGTAGAGTCTAAAGCG 1376 ||||| ||||||||||||||||| | ||||||||||||||||||||| ||||||| || | Sbjct 1424 AAGGCAACTGGAGTTGCGTTTGCGTTTGGGGAAGAGATTTATGTGGTGGAGTCTAGAGTG 1483 Query 1377 ACGGTAGTGGCTTGCGGTGCGCTTAGAACGCCGCATCTGTTGAAACGGAGCGGTTTGAAG 1436 || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1484 ACAATAGTGGCTTGCGGTGCGCTTAGAACGCCGCATCTGTTGAAACGTAGCGGTTTGAAG 1543 Query 1437 AATGGTAACATTGGGAGAAACCTTTGTTTACATCCGGTTGTTATGGCTTGGGGATGGTTT 1496 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1544 AATAGTAACATTGGGAGAAACCTTTGTCTACATCCGGTTGTTATGGCTTGGGGATGGTTT 1603 Query 1497 CCAGATGAAGATAAATGGCCGGAAAAGAAGAAAAAGAGCTACGAGGGAGGAATAATGACC 1556 ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1604 CCAGAGGAAGATAAGTGGCCGGAAAAGAAGAAAAAGAGCTACGAGGGGGGAATAATGACT 1663 Query 1557 GCGATGTCTAGCGTTGTAAATGCAGAGACGCATAGTTCTTATGGTGAAATGGTTATCCAG 1616 ||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||| Sbjct 1664 GCGATGTCTAGCGTTGTAATTGAAGAAACGCATAGTTCTTATGGTGAAATGGTTATCCAG 1723 Query 1617 ACACCTGCTCTACATCCAGGAATGTTCTCAGGGATCATTCCTTGGACATCAAGCAAGGAT 1676 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1724 ACACCTGCTCTACATCCAGGAATGTTCTCAGGGATCATTCCCTGGACATCAAGCAAGGAT 1783 Query 1677 TTCAAAACCCGAATGCTCAAATTTTCAAGAACCGCACACATTTTTGCGCTTCTGAGAGAT 1736 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1784 TTCAAAACCCGAATGCTCAAATTTTCAAGAACCGCACACATTTTTGCGCTTCTGAGAGAT 1843 Query 1737 AAAGGAACCGGAACAATAAATTCCAAGAGCTACATTGACTACAACTTAAACGATGAAGAC 1796 |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct 1844 AAAGGAACCGGAACAATAGATTCCAAGACCTACATTGACTACAACTTAAACGATGAAGAC 1903 Query 1797 GAAGAGAGTCTAAAGAGTGGTCTTGATAGAGTCTTGAAGATTCTGGCCGCAGCCGGAGCT 1856 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 1904 GAAGAGAGTCTAAAGAACGGTCTTGAAAGAGTCTTGAAGATTCTGGCCGCAGCCGGAGCC 1963 Query 1857 GAGGAGATTGGGACGCATCATTCAGAAGGTAAGAGTTTGAATGTTAGAACAGCGAGTACG 1916 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| || Sbjct 1964 GAGGAGATTGGGACGCATCATTCAGAAGGTAGGAGTCTGAATGTTAGAACAGCGAGTTCG 2023 Query 1917 TTAGAGATTGAACGGTTTGTGAGAGAAGAAAGTTCGAAGCCGTTGAAGGATTTGTCAGGT 1976 ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 2024 TTAGAGATTGAGCGGTTTGTGAGAGAAGAGAGTTCAAAGCCGTTGAAGGATTTGTCAGGT 2083 Query 1977 CAGATATGTTCAGCTCACCAAATGGGAAGTTGTAGGATGGGAATTAGGCCGGAGGAATCC 2036 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2084 CAGATATGTTCAGCTCACCAAATGGGAAGTTGTAGGATGGGAATTAGGCCGGAGGAATCC 2143 Query 2037 GCGGTGAGGCCAACAGGAGAGACTTGGGAGGTCGAAGGGTTATTTGTGGCGGACACAAGT 2096 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 2144 GCGGTGAGGCCAACAGGAGAGACTTGGGAGGTCGAAAGGTTATTTGTGGCGGACACAAGT 2203 Query 2097 GTTTTTCCGACGGCTTTAGGGGTTAATCCGATGGTCACCGTTCAGTCTATTGCTTATTGT 2156 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2204 GTTTTTCCGACCGCTTTAGGGGTTAATCCGATGGTCACCGTTCAGTCTATTGCTTATTGT 2263 Query 2157 ATTGGACTTAATGTTGTTGATGTTCTTAAGAGGAAGAAATGAGG-TACCATCTGTTCT-A 2214 ||||||||||||||||||||||||||||||| |||||| ||||| | | ||| ||| | | Sbjct 2264 ATTGGACTTAATGTTGTTGATGTTCTTAAGAAGAAGAAGTGAGGGTTC-ATCAGTT-TGA 2321 Query 2215 AATAG 2219 ||||| Sbjct 2322 AATAG 2326 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 110089795185 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5