BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg946348 Length=502 Score E Sequences producing significant alignments: (Bits) Value AT4G18460.1 | Symbols: | D-Tyr-tRNA(Tyr) deacylase family prot... 793 0.0 > AT4G18460.1 | Symbols: | D-Tyr-tRNA(Tyr) deacylase family protein | chr4:10195537-10196796 REVERSE LENGTH=805 Length=805 Score = 793 bits (429), Expect = 0.0 Identities = 478/502 (95%), Gaps = 1/502 (0%) Strand=Plus/Plus Query 1 GGAATTATCAGATTAGAGCAATGAGAGCTGTAATCCAGAGAGTCTCATCTTCCTCTGTTA 60 |||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 98 GGAATTGTCAGATCAGAGCAATGAGAGCTGTAATCCAAAGAGTCTCATCTTCCTCTGTTA 157 Query 61 CAGTGGATGGTCGAATCGTATCGGAGATTGGTCCTGGTCTCTTGGTATTAATTGGAATCC 120 | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 158 CGGTGGATGGTCGAATCGTATCGGAGATTGGTCCTGGTCTCTTGGTACTAATTGGAATCC 217 Query 121 ATGAATCAGATACCGATTCTGACGCTGATTACATATGTCGAAAAGTTTTAAACATGAGAT 180 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 218 ATGAATCAGATACCGAGTCTGACGCTGATTACATATGTCGAAAAGTTTTAAACATGAGAT 277 Query 181 TGTTCTCTAATGAAACCACTGGCAAAGGATGGGACCAAAATGTGATGCAGAGGAATTATG 240 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 278 TATTCTCTAATGAAACCACTGGCAAAGGATGGGACCAAAATGTAATGCAGAGGAATTATG 337 Query 241 GAGTTTTACTTGTTAGTCAGTTCACATTATACGGATTCTTGAAAGGTAACAAACCTGATT 300 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 338 GAGTTTTACTTGTTAGTCAATTCACATTATACGGATTCTTGAAAGGTAACAAACCAGATT 397 Query 301 TTCATGTCGCAATGCCACCTGATAAAGCGAAGCCGTTTTACGCCTCTTTACTCGAGAAAT 360 ||||||||||||||||||||||||||||||| || ||||||||||||||| | ||||||| Sbjct 398 TTCATGTCGCAATGCCACCTGATAAAGCGAAACCTTTTTACGCCTCTTTAGTTGAGAAAT 457 Query 361 TCCAGAAAGCATATAATCCCGATGCAGTAAAAGATGGTGTGTTTGGAGCTATGATGCAGG 420 ||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||| Sbjct 458 TCCAGAAAGCATATAATCCTGATGCTGTCAAAGATGGTGTGTTTGGAGCTATGATGCAGG 517 Query 421 TCAATCTTGTAAACGACGGTCCAGTCACGATGCAGCTTGAATCACCCCAATCCTCCAAGT 480 |||||||||||||||| ||||| |||||||||||||| || ||||| |||||| |||||| Sbjct 518 TCAATCTTGTAAACGATGGTCCGGTCACGATGCAGCTCGACTCACCTCAATCCACCAAGT 577 Query 481 AAGCCAAGATT-TTTTGCATAA 501 ||||||||||| |||||||||| Sbjct 578 AAGCCAAGATTGTTTTGCATAA 599 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23961688119 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5