BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg946360 Length=401 Score E Sequences producing significant alignments: (Bits) Value AT4G18395.1 | Symbols: | unknown protein; Has 30201 Blast hits... 641 0.0 > AT4G18395.1 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:10169444-10169930 FORWARD LENGTH=487 Length=487 Score = 641 bits (347), Expect = 0.0 Identities = 384/402 (96%), Gaps = 2/402 (0%) Strand=Plus/Plus Query 1 TATGGAGACAAGGTTTCCAAATGTTACAAAAATCACCCTATC-TCTTTATCTCAGACGAC 59 ||||||||||||||||||||||||| |||||||||||||| | |||||||||| |||||| Sbjct 12 TATGGAGACAAGGTTTCCAAATGTTGCAAAAATCACCCTA-CATCTTTATCTCCGACGAC 70 Query 60 AATGATCACAATAATCTCCAGTACACGAGCTTGAAAGATGTGATCTCAAGTTCCGATGGA 119 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 71 AATGATCAGAATAATCTCCAGTACACGAGCTTGAAAGACGTGATCTCAAGTTCCGATGGA 130 Query 120 TTTGGTTCGTTGTTTTGTCACCCACAATACAGTGTTCCTTCACAAGATGGGTTTCTCTTG 179 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 131 TTTGGTTCGTTGTTTTGTCACCCACAATACAGTGTTCCTTCACAAGATGGTTTTCTCTTG 190 Query 180 TCTGAGATGGATTCTTCTAACATCGCCATTAGAAACGAGCTTGTGAAAAGAGCAGCTTCA 239 || ||||||||||||||||||||||||||||| |||||||| |||||||||||||| || Sbjct 191 TCAGAGATGGATTCTTCTAACATCGCCATTAGCAACGAGCTCGTGAAAAGAGCAGCCTCG 250 Query 240 ATGTATGTTCAATCTTCTATGGTTGTTATTGCCCCTGATACGAACTGGTTCCAGAGATTC 299 ||||||||||||||||||||| |||| ||||| ||||| ||||| ||||||||||||||| Sbjct 251 ATGTATGTTCAATCTTCTATGATTGTCATTGCTCCTGACACGAATTGGTTCCAGAGATTC 310 Query 300 TGTTTGAAAGCTAAGCATCAGGCGGTTGCTGCGATTGATTGTCTTAGACCGGTTTGCCGG 359 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 311 TGTTTGAAGGCTAAGCATCAGGCGGTTGCTGCGATTGATTGTCTTAGACCGGTTTGCCGG 370 Query 360 ATTTTCGCTCGGTCTAGTTAAGAGATGTCTTTAGAAAGGGTG 401 |||||||||||||||||||||||||||||||||||||||||| Sbjct 371 ATTTTCGCTCGGTCTAGTTAAGAGATGTCTTTAGAAAGGGTG 412 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 18950941373 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5