BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg946382
Length=1075
Score E
Sequences producing significant alignments: (Bits) Value
AT4G18220.1 | Symbols: | Drug/metabolite transporter superfami... 1646 0.0
AT4G18210.1 | Symbols: ATPUP10, PUP10 | purine permease 10 | ch... 1321 0.0
> AT4G18220.1 | Symbols: | Drug/metabolite transporter superfamily
protein | chr4:10078768-10080109 FORWARD LENGTH=1035
Length=1035
Score = 1646 bits (891), Expect = 0.0
Identities = 988/1036 (95%), Gaps = 2/1036 (0%)
Strand=Plus/Plus
Query 21 ATGAAGGGGGATCACGAACTACAAGTCATTGGCCAATCAGTTGCTACAATTCTGGGCAGA 80
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAGGGGGATCAAGAAGTACAAGTCATTGGCCAATCAGTTGCTACAATTCTGGGCAGA 60
Query 81 CTATACTATGACAATGGAGGAAACAGCAAATGGCTAGCAACAGTAGTTCAGGTTGTAGGC 140
||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct 61 CTATACTATGAAAATGGAGGAAACAGCAAATGGCTAGCAACGGTAGTTCAGCTTGTAGGC 120
Query 141 TTTCCTATTCTACTTCCATATTATCTCTTGTCAGTCAAAACACATACAACAACTCATAGA 200
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 121 TTTCCTATTCTACTTCCATATCATCTCTTGTCAGTCAAAACACATACAACAACTCAGAGA 180
Query 201 GATGGCAAAATAACCTCACTTAGGAACCGTGCATTGGTTTACATAGTGCTTGGACTTCTT 260
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 181 GATGGCAAATTAACCTCACTTAGGAACCGTGCATTAGTTTACATAGTGCTTGGACTTCTT 240
Query 261 GTAGTAGCAGCTTGCTACCTATACTCTATCGGACTGCTATACCTACCTGTTTCTACCCTT 320
|||| |||||||||||||||||| || || |||||||| |||||||||||||||||||||
Sbjct 241 GTAGGAGCAGCTTGCTACCTATATTCCATTGGACTGCTTTACCTACCTGTTTCTACCCTT 300
Query 321 TCCCTGATCTGTGCATCACAGTTAGCCTTCACCGCTTTCTTCTCTTATTTACTCAACTCA 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 TCCCTGATCTGTGCATCACAGTTAGCCTTCACCGCTTTCTTCTCTTATTTACTCAACTCA 360
Query 381 CAAAAACTTACTCCTATCATTTTGAATTCTCTTTTCCTCCTCACTATATCTTCCACCCTA 440
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 CAAAAACTTACTCCTATCATTTTGAATTCTCTTTTCCTCCTCACTATATCTTCCACCCTC 420
Query 441 CTTGCATTTAATAGTGAGGAATCAAATTCCAAAAAGGTTACAAAAGAAGAGTATGTCAAA 500
||||||||||||| ||||||||| |||||||||| |||||||||| |||||||||||||
Sbjct 421 CTTGCATTTAATAACGAGGAATCAGATTCCAAAAAAGTTACAAAAGGAGAGTATGTCAAA 480
Query 501 GGTTTCATATGCACCGTTGGTGCATCTGCTGGTTTTGGTCTACTCTTATCCCTACAACAG 560
|||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 481 GGTTTCGTATGCACCGTTGGTGCATCTGCTGGGTTTGGTCTACTCTTATCCCTACAACAG 540
Query 561 CTAGCCTTCCGTAAAGTTTTAAAGAAGCAAACTTTCTCAGAAGTTATGGATCTGATAATT 620
|||||||| |||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 541 CTAGCCTTTCGTAAAGTTTTAAAGAAGCAAACTTTCTCAGAAGTTATAAATATGATAATC 600
Query 621 TACATGAGTCTAGTGGCCAGTTGTGTTAGCCTGGTGGGTCTTTTTGCTACTAGCGAGTGG 680
|||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||
Sbjct 601 TACATGAGTCTAGTGGCCAGTTGTGTTAGCGTGGTGGGGCTTTTTGCTAGTAGCGAGTGG 660
Query 681 AAAACTTTGAGCAATGAAATGGAAAACTACAAACTTGGGAAGGTATCCTATGTCATGAAC 740
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 AAAACTTTGAGCAGTGAAATGGAAAACTACAAACTTGGGAAGGTATCCTATGTCATGAAC 720
Query 741 CTAGTGTGGACAGCTGTTACCTGGCAGGTATTCTCCATTGGTGGCACAGGACTGATCTTC 800
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct 721 CTAGTGTGGACAGCTGTTACCTGGCAGGTATTCTCCATCGGTTGCACAGGACTGATCTTC 780
Query 801 GAGCTTTCCTCCCTATTCTCAAATGCAATAAGCGCTTTGGGACTCCCCGTGGTTCCCATC 860
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 781 GAGCTTTCCTCCCTATTCTCAAATGCAATAAGCGCTTTGGGACTCCCCGTGGTTCCTATC 840
Query 861 CTTGCTATCATCATTTTCCATGACAAAATGAACGGGTTAAAGGTGATTTCTATGATCCTA 920
|| ||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 841 CTGGCTGTCATCATTTTCCATGACAAAATGAACGGCTTAAAGGTGATTTCTATGATTCTA 900
Query 921 GCTATTTGGGGATTCATATCCTATGTCTACCAACAATATCTTAATGAAGA-AAACTTGAA 979
||||||||||| ||| |||||||||||||||||||||||||| ||||| | |||||||||
Sbjct 901 GCTATTTGGGGTTTCGTATCCTATGTCTACCAACAATATCTTGATGAA-ACAAACTTGAA 959
Query 980 GAAAAGTCATGGAATCCCAACAACAGAATCCCCTGACCCACCTGAAGCAGAAGGGTCAAG 1039
||||||| ||| ||| |||||||||||||||||||||| ||| |||||||||||||||||
Sbjct 960 GAAAAGTAATGAAATACCAACAACAGAATCCCCTGACCGACCAGAAGCAGAAGGGTCAAG 1019
Query 1040 TGAGCAATCAAAATAA 1055
||||||||||||||||
Sbjct 1020 TGAGCAATCAAAATAA 1035
> AT4G18210.1 | Symbols: ATPUP10, PUP10 | purine permease 10 |
chr4:10076079-10077748 FORWARD LENGTH=1522
Length=1522
Score = 1321 bits (715), Expect = 0.0
Identities = 929/1031 (90%), Gaps = 19/1031 (2%)
Strand=Plus/Plus
Query 51 GGCCAATCAGTTGCTACAATTCTGGGCAGACTATACTATGACAATGGAGGAAACAGCAAA 110
|||||| |||||||||||||| |||||||| ||||||||||||| ||||||||||| |||
Sbjct 265 GGCCAAACAGTTGCTACAATTTTGGGCAGAGTATACTATGACAACGGAGGAAACAGTAAA 324
Query 111 TGGCTAGCAACAGTAGTTCAGGTTGTAGGCTTTCCTATTCTACTTCCATATTATCTCTTG 170
||||||||||| |||||||| |||| ||||||||| | ||||||||||||||| |||||
Sbjct 325 TGGCTAGCAACGGTAGTTCAACTTGTTGGCTTTCCTGTGCTACTTCCATATTATATCTTG 384
Query 171 TCAGTCAAAACACATACAACAACTCATAGAGATGGCAAAATAACCTCACTTAGGAACCGT 230
||| | ||||||||| |||||||| |||||||||| |||| |||||||| ||||||||||
Sbjct 385 TCATTTAAAACACATGCAACAACTGATAGAGATGGAAAAAGAACCTCACCTAGGAACCGT 444
Query 231 GCATTGGTTTACATAGTGCTTGGACTTCTTGTAGTAGCAGCTTGCTACCTATACTCTATC 290
| |||||||||| ||||||||||||||||||||| ||||| |||||| || ||||| ||
Sbjct 445 GTATTGGTTTACGTAGTGCTTGGACTTCTTGTAGGAGCAGATTGCTATCTGTACTCCATT 504
Query 291 GGACTGCTATACCTACCTGTTTCTACCCT-TTCCCTGATCTGTGCATCACAGTTAGCCTT 349
||||| || ||| |||| ||||||| ||| |||||||||||||||||| |||||||||||
Sbjct 505 GGACTTCTTTACTTACCCGTTTCTA-CCTATTCCCTGATCTGTGCATCTCAGTTAGCCTT 563
Query 350 CACCGCTTTCTTCTCTTATTTACTCAACTCACAAAAACTTACTCCTATCATTTTGAATTC 409
|| ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||
Sbjct 564 CAATGCTTTCTTCTCTTATTTTCTTAACTCACAAAAACTTACCCCTATCATTTTAAATTC 623
Query 410 TCTTTTCCTCCTCACTATATCTTCCACCCTACTTGCATTTAATAGTGAGGA-ATCAAATT 468
|||||||||||| |||||||||||||||||||||||||| |||| |||||| | || | |
Sbjct 624 TCTTTTCCTCCTAACTATATCTTCCACCCTACTTGCATTCAATAATGAGGAGA-CAGACT 682
Query 469 CCA-AAAAGGTTACAAAAGAAGAGTATGTCAAAGGTTTCATATGCACCGTTGGTGCATCT 527
||| |||| |||||||||| |||||||||||||||||||||||||||||||| ||| |||
Sbjct 683 CCACAAAA-GTTACAAAAGGAGAGTATGTCAAAGGTTTCATATGCACCGTTGCTGCGTCT 741
Query 528 GCTGGTTTTGGTCTACTCTTATCCCTACAACAGCTAGCCTTCCGT-AAAGTTTTAAAGAA 586
||||||| ||||||| ||||||||||||||||||||||||| | | ||||| |||||||
Sbjct 742 GCTGGTTATGGTCTAGTCTTATCCCTACAACAGCTAGCCTTTC-TAAAAGTCCTAAAGAA 800
Query 587 GCAAACTTTCTCAGAAGTTATGGATCTGATAATTTACATGAGTCTAGTGGCCAGTTGTGT 646
||||| ||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||
Sbjct 801 GCAAAATTTCTCAGAAGTTATGGATATGATAATCTACGTGAGTCTAGTGGCCAGTTGTGT 860
Query 647 TAGCCTGGTGGGTCTTTTTGCTA-CTAGCGAGTGGAAAACTTTGAGCAATGAAATGGAAA 705
|||| ||||||| |||||||||| | || ||||||||||||||||||| ||||||||| |
Sbjct 861 TAGCGTGGTGGGGCTTTTTGCTAGC-AGTGAGTGGAAAACTTTGAGCAGTGAAATGGATA 919
Query 706 ACTACAAACTTGGGAAGGTATCCTATGTCATGAACCTAGTGTGGACAGCTGTTACCTGGC 765
||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 920 ACTACAAACATGGGAAGGTATCCTACATTATGAACCTAGTGTGGACAGCTGTTACCTGGC 979
Query 766 AGGTATTCTCCATTGGTGGCACAGGACTGATCTTCGAGCTTTCCTCCCTATTCTCAAATG 825
||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 980 AGGTATTCTCCATCGGTGGCACAGGACTGATCTTCGAGCTCTCCTCTCTATTCTCAAATG 1039
Query 826 CAATAAGCGCTTTGGGACTCCCCGTGGTTCCCATCCTTG-CTATCATCATTTTCCATGAC 884
||||||||| |||||||||||| |||||||| ||| ||| || | |||||||||||||||
Sbjct 1040 CAATAAGCGTTTTGGGACTCCCAGTGGTTCCTATC-TTGGCTGTAATCATTTTCCATGAC 1098
Query 885 AAAATGAACGGGTTAAAGGTGATTTCTATGATCCTAGCTATTTGGGGATTCA-TATCCTA 943
|||||||| |||||||||||||||||||||||||||||||||||||| |||| | |||||
Sbjct 1099 AAAATGAATGGGTTAAAGGTGATTTCTATGATCCTAGCTATTTGGGGTTTCACT-TCCTA 1157
Query 944 TGTCTACCAACAATATCTTAATGA-AGAAAACTTGAAGAAAAGTCATGGAATCCCAACAA 1002
||||||||||||||||||| |||| | ||||||||||||||| ||||| |||| ||||||
Sbjct 1158 TGTCTACCAACAATATCTTGATGACA-AAAACTTGAAGAAAAATCATGAAATCACAACAA 1216
Query 1003 CAGAATCCCCTGACCCACCTGAAGCAGAAGGGTCAAGT-GAGCAATCAAAATAAGCTGTT 1061
||||||||||||||||||| |||||||||| ||||| | | ||||||||||||||||| |
Sbjct 1217 CAGAATCCCCTGACCCACCAGAAGCAGAAGAGTCAACTTG-GCAATCAAAATAAGCTGAT 1275
Query 1062 ATTTC-AAAGA 1071
|||| |||||
Sbjct 1276 ATTTTGAAAGA 1286
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 52660371705
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5