BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg946414 Length=378 Score E Sequences producing significant alignments: (Bits) Value AT4G17990.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 231 3e-60 > AT4G17990.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17700.1); Has 134 Blast hits to 131 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:9984386-9985805 REVERSE LENGTH=938 Length=938 Score = 231 bits (125), Expect = 3e-60 Identities = 200/235 (85%), Gaps = 9/235 (4%) Strand=Plus/Plus Query 126 GTAGCGGTAGAAACTGAGGAAAATGTGAAGCCA-CCAAATGAGAGACTCAAGGCCAGAAA 184 ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 585 GTAGCTGTAGAAACTGAGGAAAATGTGAAG-CAGCCAAATGAGAGACTCAAGGCCAGAAA 643 Query 185 TGCAGTTTTCTACATAAGGTACATGTACTACCCGAATAAGGGTCGGGCTCCTACGGGTCA 244 |||||||||||||||| |||||| ||||||||| |||||||| |||||||||| |||| | Sbjct 644 TGCAGTTTTCTACATACGGTACAGGTACTACCCTAATAAGGGACGGGCTCCTAAGGGTAA 703 Query 245 TTGTCACAAACCTCCCCGTGATCGCGTAGCTAT-AGTAAAAAGAACCATGGACAAGAACA 303 | ||||||| ||||||||||||||| | ||||| | |||||||||| ||||||| || Sbjct 704 TGGTCACAAGCCTCCCCGTGATCGCATCGCTATCA-TAAAAAGAACTATGGACATT--CA 760 Query 304 CCGGATACTTCACTCTCGAGTTCGAGGG-CAGGTTTTCAAAATCTCTTTTGTAAG 357 || | || ||| ||||||||||| | ||| | ||||| ||||| |||||| Sbjct 761 GGGGCTTCT-CACACTCGAGTTCGATACTC-GGTATGCAAAAACTCTTCTGTAAG 813 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17794783146 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5