BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg946493
Length=2563
Score E
Sequences producing significant alignments: (Bits) Value
AT4G17410.3 | Symbols: | DWNN domain, a CCHC-type zinc finger ... 3670 0.0
AT5G47430.1 | Symbols: | DWNN domain, a CCHC-type zinc finger ... 1491 0.0
> AT4G17410.3 | Symbols: | DWNN domain, a CCHC-type zinc finger
| chr4:9715761-9721700 FORWARD LENGTH=3141
Length=3141
Score = 3670 bits (1987), Expect = 0.0
Identities = 2390/2574 (93%), Gaps = 70/2574 (3%)
Strand=Plus/Plus
Query 1 TCATTATCAGATTAAATCGAATGGCAATTTATTACAAGTTTAAGAGTGCGAGGGATTATG 60
||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||
Sbjct 580 TCATTATCAGATTAATTCCAATGGCAATATATTACAAGTTTAAGAGTGCGAGGGATTATG 639
Query 61 ATACCATCTCCATGGATGGTCCTTTTATAACAGTTGGTTTTCTCAAAGAAAAAATTTACG 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 640 ATACCATCTCCATGGATGGTCCTTTTATAACAGTTGGTTTACTCAAAGAAAAAATTTACG 699
Query 121 AAACTAAGCATTTGGGAAGTGGTAAAGACCTTGACATTGTCATCTCTAATGCCCAAACTA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 700 AAACTAAGCATTTGGGAAGTGGTAAAGACCTTGACATTGTCATCTCTAATGCCCAAACTA 759
Query 181 ATGAAGAATATCTGGATGAAGCAATGTTAATTCCCAAAAATACTTCTGTTCTAATTCGCC 240
||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||
Sbjct 760 ATGAAGAATATCTGGATGAAGCAATGTTAATACCAAAAAATACTTCTGTGCTAATTCGCC 819
Query 241 GGGTCCCTGGACGCCCTCGCATCAGAATTATTACCATACCAGAGCCGAGAGTTGAGGATA 300
|||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||
Sbjct 820 GGGTCCCTGGACGCCCTCGCATCAGAATTATTACCAGAGAAGAGCCGAGAGTCGAGGATA 879
Query 301 AAGTGGAAAACGTTCAAGCTGACCTGAACAATGTTATTACTGCTGATGCATCTGCTGTTG 360
|||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||
Sbjct 880 AAGTGGAAAACGTTCAAGCTGATATGAACAATGTTATTACTGCTGATGCATCTCCCGTTG 939
Query 361 AAGACGAATGGGATGAGTTTGGGAATGATTTGTATTCAATTCCTGATGCCCCAGCAGTCC 420
|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 940 AAGATGAATTCGATGAGTTTGGGAATGATTTGTATTCAATTCCTGATGCCCCAGCAGTCC 999
Query 421 ATTCTAATAACCTATGTCATGATCCTGCACCAACCGATGATAAAGTAGATGAAGAAACCA 480
||||||||||||||||||||||| ||||||| | | || | | |||||||||||||
Sbjct 1000 ATTCTAATAACCTATGTCATGATTCTGCACC-A--GCTG----A-T-GATGAAGAAACCA 1050
Query 481 AAATAAAGGCATTAATTGACACCCCAGCACTAGACTGGCAGCAACAAGGTGCGGATGGTT 540
| ||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| |||
Sbjct 1051 AGCTAAAGGCATTAATTGACACTCCAGCACTAGACTGGCATCAACAAGGTGCAGATAGTT 1110
Query 541 TTGGCCCGGGCAGAGGTTATGGGAGGGGTATGGCTGGAAGGATGGGTGGCCGCGGTTTTG 600
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TTGGCCCGGGTAGAGGTTATGGGAGGGGTATGGCTGGAAGGATGGGTGGCCGCGGTTTTG 1170
Query 601 GAATGGAAAGGAAAACGCCGCCACCAGGCTATGTTTGCCATCGGTGCAATGTTTCTGGAC 660
||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1171 GAATGGAGAGGACAACACCGCCACCAGGCTATGTTTGCCATCGGTGCAATGTTTCTGGAC 1230
Query 661 ATTTTATTCAACACTGCTCCACAAACGGTAATCCTAATTTTGATGTTAAAAGAGTTAAAC 720
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 1231 ATTTTATTCAACACTGCTCCACAAACGGTAATCCTAACTTTGATGTTAAGAGAGTTAAAC 1290
Query 721 CACCTACTGGTATCCCCAAGTCAATGCTGATGGCGACCCCAAATGGCTCTTACTCCTTGC 780
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 1291 CACCTACTGGTATCCCCAAGTCGATGCTGATGGCAACCCCAAATGGCTCTTACTCCTTGC 1350
Query 781 CAAGTGGCGCAGTAGCAGTTTTAAAACCAAATGAGGATGCGTTTGAGAAGGAAATGGAGG 840
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1351 CAAGTGGCGCAGTAGCAGTTTTAAAACCAAACGAGGATGCGTTTGAGAAGGAAATGGAGG 1410
Query 841 GATTGACATCAACAACACGATCAGTCGGGGAATTTCCTCCTGAATTAAAATGCCCATTGT 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1411 GATTGACATCAACAACACGATCAGTCGGGGAATTTCCTCCTGAATTAAAATGCCCATTGT 1470
Query 901 GCAAAGAAGTGATGAGAGATGCTGCACTGGCAAGCAAATGCTGTCTCAAGAGCTACTGTG 960
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1471 GTAAAGAAGTGATGAGAGATGCTGCACTGGCAAGCAAATGCTGCCTCAAGAGCTACTGTG 1530
Query 961 ACAAGTGTATTAGAGATCACATCATTGCCAAGTCAATGTGTGCTTGTACAGCAACTGATG 1020
|||||||||||||||||||||||||||| ||||||||||||| |||| ||||||| |||
Sbjct 1531 ACAAGTGTATTAGAGATCACATCATTGCAAAGTCAATGTGTGTTTGTGGAGCAACTCATG 1590
Query 1021 TCCTAGCTGATGATCTGCTTCCAAACAAGACCCTAAGGGATACTATAAACCGTATCTTGG 1080
|||||||||||||||| || || ||||| ||||||||||||||||||||||| || ||||
Sbjct 1591 TCCTAGCTGATGATCTTCTACCTAACAAAACCCTAAGGGATACTATAAACCGGATATTGG 1650
Query 1081 AGTCTGGTAACAGTAGTGCTGAGAACGCTGGCAGCATGTGTCAAGTCCAAGATATGGAGT 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1651 AGTCTGGTAACAGTAGTGCTGAGAACGCTGGCAGCATGTGTCAAGTCCAAGATATGGAGT 1710
Query 1141 CTGCACGGTGTCCACCTCCCAAGGTTTTATCTCCTACTACGTCTGCTGCATCTGGAAGCG 1200
||| |||||||||||||||||||| | ||||||||||||| ||||||||||||||| |||
Sbjct 1711 CTGTACGGTGTCCACCTCCCAAGGCTCTATCTCCTACTACATCTGCTGCATCTGGAGGCG 1770
Query 1201 AAAAGAAACCAGCTCCTAGTAACAACAATGAGATTTCAACTCTAAAGCCGTCAATAGAAA 1260
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1771 AAAAGAAACCAGCTCCTAGTAACAACAATGAGACTTCAACTCTAAAGCCGTCAATAGAAA 1830
Query 1261 TA-CTGGAGATCACAAGTACTCCTCGGGCGTCTGCAGAAATAGTTAAAGTGGAAAAGCCA 1319
|| | |||||||||||| || | |||||||||||||||||||||||||||||||||||
Sbjct 1831 TAGC-AGAGATCACAAGTGCT--T-GGGCGTCTGCAGAAATAGTTAAAGTGGAAAAGCCA 1886
Query 1320 GTTGATGCATCTGAAAACATTCAAGGATCCTCAAATGGCAAGGAAGCAGCAGTTTCACAA 1379
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1887 GTTGATGCATCTGCAAACATTCAAGGATCCTCAAATGGCAAGGAAGCAGCAGTTTCACAA 1946
Query 1380 CTGAATGCGCAGGCCCCCAAGGAAGAAATGCCGCAGCAGGTTGCTTCTGGGGAGC-A--A 1436
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 1947 CTGAATACGCAGCCCCCCAAGGAAGAAATGCCGCAGCAGGTTGCTTCTGGGGAGCAAGCA 2006
Query 1437 GGAAAAAGGAAGAAGAAGAAACCTCGGATGACTGGAACCGATCTAGCAGGCCCTGACTAT 1496
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2007 GGAAAAAGGAAGAAGAAGAAACCTCGGATGAGTGGAACCGATCTAGCAGGCCCTGACTAT 2066
Query 1497 ATGATGCCCATGGGTCCAGGTCCCGGTAATCAGTACTTCAATGGTTTGCAACCCGGCTTC 1556
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2067 ATGATGCCCATGGGCCCAGGTCCCGGTAATCAGTACTTCAATGGTTTCCAACCCGGCTTC 2126
Query 1557 AACGGCGTCCAACATGGGTTCAATGGCGTTCAACCTGGGTTCAATGGCTTTCATCATGGT 1616
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2127 AACGGCGTTCAACATGGGTTCAATGGCGTTCAACCTGGGTTCAATGGCTTTCATCATGGT 2186
Query 1617 TTCAATGGGTTTCCAGGCCCTTTTCCTGGTGCGATGCCTCCTTTTGTTGGCTATGGATTA 1676
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2187 TTCAATGGGTTTCCAGGCCCTTTTCCTGGTGCGATGCCTCCTTTTGTTGGCTATGGATT- 2245
Query 1677 GGCCCCATGGACATGTCGTTTGGCGGTGTGATGCATCCAGATCCTTTTGCTGCACAGGGC 1736
||| | | || | || || |||||||||||||| ||||||||||||
Sbjct 2246 -------TGG-C--G--GT--G----TG--ATCCATCCAGATCCTTTCGCTGCACAGGGC 2285
Query 1737 TTCGGGTTCCCAAATATACGACCACCTTATAGGGACCTTGCGGAGATGGGGAATCGTATG 1796
|| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2286 TTTGGGTTCCCTAATATACCACCACCTTATAGGGACCTTGCGGAGATGGGGAATCGTATG 2345
Query 1797 AATCTCCAGCATCCTATAATGGGGAGAGAAGAATTTGAAGCCAAGAAAGCTGAGATGAAA 1856
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct 2346 AATCTCCAGCATCCTATAATGGGGAGAGAAGAATTTGAAGCTAAGAAAACTGAGATGAAA 2405
Query 1857 AGAAAGCGTGACAACGAGA---GACGGTCAGAAGGAGGGAATGTCGTCAGGGACGGTGAA 1913
||||||||||| ||||||| |||| || |||||||||||||||||||||||| |||||
Sbjct 2406 AGAAAGCGTGAAAACGAGATTCGACGATCGGAAGGAGGGAATGTCGTCAGGGACAGTGAA 2465
Query 1914 AAGAGCAGAATAATGAACAACTCGGCAG-CATCTTTCTCACCCATGAAGCCAAAATCTAG 1972
|||||||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||
Sbjct 2466 AAGAGCAGAATAATGAACAACTCGGCAGTCA-CTTCCTCACCCGTGAAGCCAAAATCTAG 2524
Query 1973 ACAAGGACCTCCACCACCGATTTCGTCGGATTATGACCGTCGCAGGCGATCGGAGAGATT 2032
|||||||||||| || ||||||||||| ||||| |||||||||||||||||||| ||||
Sbjct 2525 ACAAGGACCTCCGCCGCCGATTTCGTCTGATTACGACCGTCGCAGGCGATCGGATAGATC 2584
Query 2033 ATCACCAGAGCGTCAGTCATATCGGAGGGTCAAATCTCCCTCA-CGATTATCCAGCAGGA 2091
||||| ||||||||||||| ||| ||| ||| ||||| || |||| |||||||||||
Sbjct 2585 GTCACCGGAGCGTCAGTCATCTCGAAGGTTCACCTCTCC-TCCTCGATCATCCAGCAGGA 2643
Query 2092 AATCTGAGAGTGATCGTCACAATGACCATCACCAAGACCTCGATTCCGAACACGACCGCC 2151
|||||||| ||||||||||| | || |||||||||||||||||||||||||
Sbjct 2644 AATCTGAGCGTGATCGTCAC-----C-AT------GACCTCGATTCCGAACACGACCGCC 2691
Query 2152 GCCGTGACCGTCACAGAGATACAGATCGCAAGCGCCGTAAGAGATCCGAAAA-TCCATCA 2210
|||||||||||| |||||| ||||||||||||| |||||||||||||||||| || ||||
Sbjct 2692 GCCGTGACCGTCCCAGAGAGACAGATCGCAAGCACCGTAAGAGATCCGAAAAGTC-ATCA 2750
Query 2211 TCGGAACCAACCGCAGAGATCGATGATAACCACAAGTCTAACGTATTCACTCGGATAAGC 2270
||||| ||||| | |||||| || |||||| | ||||||||||| |||||||||||||||
Sbjct 2751 TCGGATCCAACTGTAGAGATAGACGATAACAATAAGTCTAACGTGTTCACTCGGATAAGC 2810
Query 2271 TTTCGAGAGGAGGAATCTTCTGGCAAACAACGAAAGACATCAAAGGCTTCTCCAGCGCCT 2330
|||| |||||| | |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2811 TTTCCAGAGGA--A-TCTTCTGGCAAACAACGAAAGACATCAAAGTCTTCTCCAGCGCCT 2867
Query 2331 CCAGAGAGCTC-GCTAGCCGCC-GTTTCATCGGGTCGTCGTCA-CA--GTCGAAGAGAAA 2385
||||||||||| | | ||| || |||||||||||||||||||| || ||||||||||||
Sbjct 2868 CCAGAGAGCTCAG-TCGCC-CCAGTTTCATCGGGTCGTCGTCATCACAGTCGAAGAGAAA 2925
Query 2386 GAGAGATGGTAGAATACGATTCAAGTGATGATGAAGACAGACATTTCAAGAGGAAGCCAT 2445
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2926 GAGAGATGGTGGAATACGATTCAAGTGATGATGAAGACAGACATTTCAAGAGGAAGCCAT 2985
Query 2446 CAAGGTACAAGCGATCTCCTTCGGTGGCACCTTCCGACGCCGGTGATGAGCATTTCCGCC 2505
||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |
Sbjct 2986 CAAGGTACAAGCGATCTCCTTCGGTTGCACCTTCTGACGCCGGTGATGAGCATTTCCGTC 3045
Query 2506 ATTCCAAGCGATCAAAAGGAGAAAGAGCGCGAGCTTGATTCGAACAAATAAAGA 2559
|||| |||||||| |||||||||||||||||||||||||||||| || | ||||
Sbjct 3046 ATTCTAAGCGATCTAAAGGAGAAAGAGCGCGAGCTTGATTCGAAGAA-TGAAGA 3098
> AT5G47430.1 | Symbols: | DWNN domain, a CCHC-type zinc finger
| chr5:19235631-19241221 REVERSE LENGTH=3300
Length=3300
Score = 1491 bits (807), Expect = 0.0
Identities = 1700/2113 (80%), Gaps = 133/2113 (6%)
Strand=Plus/Plus
Query 20 AATGGCAATTTATTACAAGTTTAAGAGTGCGAGGGATTATGATACCATCT-CCATGGATG 78
|||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||
Sbjct 433 AATGGCAATTTATTACAAGTTTAAGAGTGCAAGGGATTATGATACCAT-TGCCATGGATG 491
Query 79 GTCCTTTTATAACAGTTGGTTTTCTCAAAGAAAAAATTTACGAAACTAAGCATTTGGGAA 138
||||||||||| | || ||| |||||||||| ||||||| |||||||||||||||||| |
Sbjct 492 GTCCTTTTATATCCGTCGGTATTCTCAAAGACAAAATTTTCGAAACTAAGCATTTGGGCA 551
Query 139 GTGGTAAAGACCTTGACATTGTCATCTCTAATGCCCAAACTAATGAAGAATATCTGGATG 198
||||||||||||||| |||||| |||| |||||||||||||| ||||| ||||||||||
Sbjct 552 CTGGTAAAGACCTTGATATTGTCGTCTCCAATGCCCAAACTAACGAAGAGTATCTGGATG 611
Query 199 AAGCAATGTTAATTCCCAAA-AATACTTCTGTTCTAATTCGCCGGGTCCCTGGACGCCCT 257
||||||||||||| |||||| ||||| ||||| || ||||| ||||| |||||||| |||
Sbjct 612 AAGCAATGTTAAT-CCCAAAGAATACATCTGTCCTTATTCGTCGGGTTCCTGGACGTCCT 670
Query 258 CGCATCAGAATTATTACCATACCAGAGCCGAGAGTTGAGGATAAAGTGGAAAACGTTCAA 317
||||||| | ||||||||| || |||||| ||| | || ||||||||||| |||||||
Sbjct 671 CGCATCACAGTTATTACCACACAAGAGCCTAGAATCCAGAATAAAGTGGAAGACGTTCAG 730
Query 318 GCTGA--CCTGAACAATGTTATTACTGCTGATGCATCTGCTGTTGAAGA-C--GAA--TG 370
||||| || | |||| || | ||||||| ||||||||| |||| | ||| ||
Sbjct 731 GCTGAAACC--ACCAATTTTCCTGTTGCTGATCCATCTGCTGCTGAATTTCCTGAAGATG 788
Query 371 GG-ATGA-G--TTTGGGAATGAT-TTGTATTCAATTCCTGATGCCCCAGCA-GTCCATTC 424
| |||| | ||||||| |||| || ||||| ||||||||| ||| || | | ||| |
Sbjct 789 AGTATGACGAGTTTGGGACTGATCTT-TATTCCATTCCTGATACCCAAG-ATGCCCAG-C 845
Query 425 -TAATAA-CCTATGTCATGATCCTGCA-CCAACCGATGATAAAGTAGATGAAGAAACCAA 481
|| || || | ||| | ||| |||| || | || || |||||||||||||||| |||
Sbjct 846 ATATTATTCC-ACGTCCTCATCTTGCAACCG-CAGACGACAAAGTAGATGAAGAAAGCAA 903
Query 482 AATAAAGGCATTAATTGACACCCCAGCACTAGACTGGCAGCAAC-A-A-GGTGCG-GATG 537
||| |||| | |||||||| |||||||| |||||||| |||| | | ||| | |||
Sbjct 904 AATTCAGGCGCTGATTGACACTCCAGCACTTGACTGGCAACAACGACAAGGT-CAAGATA 962
Query 538 GTTTTGGCCCGGGCAGAGGTTATGGGAGGGGTATGGCTGGAAGGATGGGTGGCCGCGGTT 597
|||||| | || ||||||||||||||||||||| ||||||||||| ||| || ||||
Sbjct 963 CTTTTGGAGCTGGTAGAGGTTATGGGAGGGGTATGCCTGGAAGGATGAATGGACGTGGTT 1022
Query 598 TTGGAATGGAAAGGAAAACGCCGCCACCAGGCTATGTTTGCCATCGGTGCAATGTTTCTG 657
|||||||||||||||||||||| || ||||| ||||| |||||||| |||||| | |||
Sbjct 1023 TTGGAATGGAAAGGAAAACGCCACCTCCAGGTTATGTGTGCCATCGTTGCAATATCCCTG 1082
Query 658 GACATTTTATTCAACACTGCTCCACAAACGGTA-ATCCTAATTTTGATGTTAAAAGAGTT 716
||||||||||||| || ||| ||||||| || | | ||||| | ||||||||| ||||||
Sbjct 1083 GACATTTTATTCAGCATTGCCCCACAAATGG-AGACCCTAACTATGATGTTAAGAGAGTT 1141
Query 717 AAACCACCTACTGGTATCCCCAAGTCAATGCTGATGGCGACCCCAAATGGCTCTTACTCC 776
|| ||||||||||||||||||||||| ||| |||||||||||||| |||| ||||| |||
Sbjct 1142 AAGCCACCTACTGGTATCCCCAAGTCCATGTTGATGGCGACCCCAGATGGTTCTTATTCC 1201
Query 777 TTGCCAAGTGGCGCAGTAGCAGTTTTAAAACCAAATGAGGATGCGTTTGAGAAGGAAATG 836
||||||||||||||||| |||||| | ||||||||||||||||| |||||||||||||||
Sbjct 1202 TTGCCAAGTGGCGCAGTTGCAGTTCTGAAACCAAATGAGGATGCTTTTGAGAAGGAAATG 1261
Query 837 GAGGGATTGACATCAACAACACGATCAGTCGGGGAATTTCCTCCTGAATTAAAATGCCCA 896
||||||||| ||||||||||||| || || || ||| |||| ||||| |||||||||||
Sbjct 1262 GAGGGATTGCCATCAACAACACGTTCTGTAGGAGAACTTCCACCTGAGCTAAAATGCCCA 1321
Query 897 TTGTGCAAAGAAGTGATGAGAGATGCTGCACTGGCAAGCAAATGCTGTCT-CAAGAGCTA 955
|| |||||||||||||||| ||||||||| || |||||||||| ||| | ||||||||
Sbjct 1322 TTATGCAAAGAAGTGATGAAAGATGCTGCGCTTACAAGCAAATGTTGT-TACAAGAGCTT 1380
Query 956 CTGTGACAAGTGTATTAGAGATCACATCATTGCCAAGTCAATGTGTGCTTGTACA-GCAA 1014
||||||||||||||| ||||||||||| ||| | ||||||||||||| |||| | | |
Sbjct 1381 CTGTGACAAGTGTATCAGAGATCACATTATTTCAAAGTCAATGTGTGTTTGTGGAAG-AT 1439
Query 1015 CTGATGTCCTAGCTGATGATCTGCTTCCAAACAAGACCCTAAGGGATACTATAAACCGTA 1074
| ||||| || ||||| || || || |||||||||||||| |||||||| ||||||||||
Sbjct 1440 CAGATGTACTTGCTGACGACCTTCTACCAAACAAGACCCTCAGGGATACCATAAACCGTA 1499
Query 1075 TCTTGGA-GTCTGGTAAC-AGTAGTGCTGAGAACGCTGG-CAGCATGTGTC-A-AGTCCA 1129
| ||||| | |||| ||| | ||| ||||||| | ||| |||| | || | | | |||
Sbjct 1500 TTTTGGAAG-CTGGAAACGA-TAGCACTGAGAATG-TGGGCAGCGT-TGGCCATA-TCCC 1554
Query 1130 AGATATGGAGTCTGCACGGTGTCCACCTCCCAAGGTTTTATCTCCTACTACGTCTGCTGC 1189
|||| ||||||||||||| |||||||||||||||| | ||||||||||||| |||| |||
Sbjct 1555 AGATTTGGAGTCTGCACGCTGTCCACCTCCCAAGGCTCTATCTCCTACTACATCTGTTGC 1614
Query 1190 ATCTGGAAG-CGAAAAGAAACCAGCTCCT-AGTAACAACAATGA-GATTTCAACTCTAAA 1246
|||| ||| ||| |||||||||| | || |||||||| ||||| | || ||||| ||||
Sbjct 1615 ATCTA-AAGGCGAGAAGAAACCAG-TACTTAGTAACAATAATGATGCTT-CAACTTTAAA 1671
Query 1247 GCCGTCAATAGAAATA-CTGGAGATCACAAGTACTCCTCGGGCGTCTGCAGAAATAGTTA 1305
| || |||| ||| | | | ||||||||||| | ||||| || ||||||||| | | |
Sbjct 1672 GGCGCCAATGGAAGTTGCAG-AGATCACAAGTGCCCCTCGTGCATCTGCAGAAGT-G--A 1727
Query 1306 AAGTGGAAAAGCCAGTTGATGCATCTGAAAACATTCAAGGATCC-TCAAATG-GCAAGGA 1363
| || ||||||||||||||||||| ||||| || |||||| ||| | | || | ||| |
Sbjct 1728 ATGTAGAAAAGCCAGTTGATGCATGTGAAAGCACTCAAGGGTCCGTGAT-TGTGAAAG-A 1785
Query 1364 AGCAGCAGTTTCACAACT-GAATGCGCAGGCCCCCAAGGAAGAAATGCCGCAGCAGGTTG 1422
|||| |||| ||| || | |||| |||| ||||||||||||||||||| |||||||||||
Sbjct 1786 AGCAACAGTGTCA-AAGTTGAATACGCAAGCCCCCAAGGAAGAAATGCAGCAGCAGGTTG 1844
Query 1423 CTTCTGGGGAGCAAGGAAAAAGGAAGAAGAAGAAACC-----T-C--GG-A-TGAC-TG- 1470
|| |||| |||| |||||||| |||||| |||||||| | | || | |||| ||
Sbjct 1845 CTGCTGGAGAGCCAGGAAAAAAGAAGAAAAAGAAACCAAGAGTGCCTGGGAATGACATGC 1904
Query 1471 ---G-AA-CC-G----A--TCTAGCAGGCCCTGACTATATGATGCCCATGGGTCCAGGTC 1518
| || || | | |||||||||||||||||||||||||| ||||| |||||||
Sbjct 1905 AATGGAATCCTGTGCCAGATCTAGCAGGCCCTGACTATATGATGCAAATGGGACCAGGTC 1964
Query 1519 CCGGTAATCAGTACTTCAATGGTTTGCAACCCGGCTTCAACGGCGTCCAAC-ATGGGTTC 1577
| | ||||||||||| || ||||||| |||||||| ||||| |||| | || |||
Sbjct 1965 C-G-----CAGTACTTCAACGGCATGCAACCTGGCTTCAATGGCGTACAACCA-GGCTTC 2017
Query 1578 AATGGCGTTCAACCTGGGTTCAATGGCTTTCATCATGGTTTCAATGGGTTTCCAGGCCCT 1637
|| || ||||||||||| |||||||||||||| | ||| |||||||| ||| ||||||
Sbjct 2018 AACGGTGTTCAACCTGGCTTCAATGGCTTTCACCCTGGCTTCAATGGATTTGGAGGCCCG 2077
Query 1638 TTTCCTGGTGCGATGCCTCCTTTTGTTGGCTATGGATTAGGCCCCATGGACATGTCG-TT 1696
||||| || || |||||||| ||| | || || |||||| ||| ||||||||| | ||
Sbjct 2078 TTTCCAGGCGCAATGCCTCCATTTATGGGTTACGGATTAAACCCAATGGACATGG-GATT 2136
Query 1697 TGGCGG---T--G--T--GATGCATCCAGATCCTTTTGCTG-CACAGGGCTTCGGGTTCC 1746
||| || | | | ||||||||||||||| || || |||| || || |||||||
Sbjct 2137 TGGTGGGGGTATGAATATGATGCATCCAGATCCATTCA-TGGCACAAGGATTTGGGTTCC 2195
Query 1747 CAAATATACGACCACCTTATAGGGACCTTGCGGAGATGGGGAATCGTATGAATCTCCAGC 1806
| ||||||| |||||| |||||||||| || || ||||| || || ||||||||||| |
Sbjct 2196 CTAATATACCACCACCCCATAGGGACCTAGCTGAAATGGGAAACCGAATGAATCTCCAAC 2255
Query 1807 ATCCTATAATGGGGAGAGAAGAATTTGAAGCCAAGAAA-GCTGAGATGAAAAGAAAGCGT 1865
| |||| ||||| ||||| ||| |||||| |||| ||||||||| |||||| |||
Sbjct 2256 GTGCTATGATGGGCAGAGATGAAGCCGAAGCCC-GAAACGCTGAGATGTTAAGAAAACGT 2314
Query 1866 GACAACGAGAGACGGTCAGAAGGAGGGAA--TGTCGTCAGGGACGGTGAAAAGAGCAGAA 1923
|| ||||||||||| | ||||| ||||| ||| | ||||| || || || |||||||
Sbjct 2315 GAAAACGAGAGACGACCTGAAGGTGGGAAGATGTT-T-AGGGATGGAGAGAATAGCAGAA 2372
Query 1924 T-A--ATGAACAAC--T-CGGCAGCATCTTTC-TCACCCATGAAGCC-AA-AA-TCTAGA 1973
| | ||||||||| | | |||| ||| | ||| |||| || || || || ||||||
Sbjct 2373 TGATGATGAACAACGGTACTTCAGCCTCTG-CATCATCCATCAACCCTAATAAATCTAGA 2431
Query 1974 CAAGGACCTCCACCACCGATTTCGTCGGATTATGACCGTCGCAGGCGATCGGAGA-GAT- 2031
|||| |||||||||||| || | || |||| || || || || ||| |||||| ||
Sbjct 2432 CAAGCACCTCCACCACCAATC-CA-CG-ATTACGATCGCCGGAGACGACCGGAGAAGAGA 2488
Query 2032 -TATCACCAGAGC 2043
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Sbjct 2489 CTATCCCCAGAGC 2501
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 127223367448
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5