BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg946595 Length=649 Score E Sequences producing significant alignments: (Bits) Value AT2G03020.1 | Symbols: | Heat shock protein HSP20/alpha crysta... 527 5e-149 AT4G16540.1 | Symbols: | Heat shock protein HSP20/alpha crysta... 335 3e-91 AT4G16550.1 | Symbols: | HSP20-like chaperone | chr4:9318442-9... 265 5e-70 > AT2G03020.1 | Symbols: | Heat shock protein HSP20/alpha crystallin family | chr2:882645-884148 REVERSE LENGTH=1117 Length=1117 Score = 527 bits (285), Expect = 5e-149 Identities = 334/358 (93%), Gaps = 2/358 (1%) Strand=Plus/Plus Query 276 GATCTCCGTGGCACCGATCCAAATGACCCGGCGTTAACCGGTCCGGTATTGCAGCCACAT 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 485 GATCTCCGTGGCACCGATCCAAATGACCCGGCGTTAACCGGTCCGGTATTGCAGCCACAT 544 Query 336 CCAATGGCGTTCCCACTAAC-GACTATGGCTTATGAGTCGAAGCAGCTCCCAGACGGCAA 394 ||| | |||||||||| ||| ||||||||| ||||||||||||||||||||| ||||||| Sbjct 545 CCACTTGCGTTCCCAC-AACCGACTATGGCCTATGAGTCGAAGCAGCTCCCAAACGGCAA 603 Query 395 ACTATACGTGCGTGTAGACATGCCGGGTGTTCCCAGTGACAACTTCACTGTCTCTGTCAC 454 ||||| |||||||| |||||||||||||||||||| || |||||||||||||||||||| Sbjct 604 ACTATTCGTGCGTGCAGACATGCCGGGTGTTCCCAAAGAAAACTTCACTGTCTCTGTCAC 663 Query 455 GAATGGGCGAGTGAAGGTGACTGGTGAAGCTCCTGCCGTTGGCCACCACTCAAGTGGCCG 514 |||||||||||| |||||||||||| |||||||||| ||| |||| | ||||||||||| Sbjct 664 GAATGGGCGAGTCAAGGTGACTGGTCAAGCTCCTGCGGTTAGCCATGATTCAAGTGGCCG 723 Query 515 TTTCTACTCTGGTGACGTTGCTATGCTCTCCACTCCTGTTGACATTCCCAGCCATCGGAT 574 |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct 724 TTTCTACTCTGGTGACGTCGCTATGCTCTCCACTCCTGTTGACATTCCCAGCCGTCGGAT 783 Query 575 CGAGACCATCGCCAAGAACGGTGTGATTGGTCTCCTTATCCCTCCATTTTGCTGATGA 632 | |||||||||||||||||||||| ||| |||||||||||||||||||||| |||||| Sbjct 784 CAAGACCATCGCCAAGAACGGTGTCATTCGTCTCCTTATCCCTCCATTTTGATGATGA 841 Score = 237 bits (128), Expect = 1e-61 Identities = 169/189 (89%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 1 CTTGAATCTTTGGTTGAATCATGGCAATGGCCGTTCCTCTTAGTACTCCTCCTCAATCTC 60 |||| | |||| |||||||||||||||||||||||||| ||||| ||| |||||| |||| Sbjct 49 CTTGTACCTTT-GTTGAATCATGGCAATGGCCGTTCCTGTTAGTGCTCGTCCTCAGTCTC 107 Query 61 CCGAAGGTTTTTACGCAATCAACAACCAGTTTCTGACGTCTGGGCCAAAAGGGTTCACTG 120 ||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||| Sbjct 108 CCGAAGGTTTTTACGCAATCAACAACCAGTTTCAGACGAATGGGCCAAAAGGGTTCTCTG 167 Query 121 AGTTCAAGATGCTGGTAAATGAAGACATGTTCGTGAGAATGGATTTGCCTGGAGTTCCTG 180 || ||||||| || | || |||||||||||| |||| |||||||||||||||||||||| Sbjct 168 AGATCAAGATTCTAGCGAACGAAGACATGTTCTTGAGGATGGATTTGCCTGGAGTTCCTG 227 Query 181 AAGAAGGCG 189 | ||||||| Sbjct 228 ATGAAGGCG 236 > AT4G16540.1 | Symbols: | Heat shock protein HSP20/alpha crystallin family | chr4:9316023-9317153 REVERSE LENGTH=699 Length=699 Score = 335 bits (181), Expect = 3e-91 Identities = 227/249 (91%), Gaps = 4/249 (2%) Strand=Plus/Plus Query 379 AGCTCCCAGACGGCAAACTATACGTGCGTGTAGACATGCCGGGTGTTCCCAGTGACAACT 438 |||||||| |||||||||||| |||||||| ||||||||| |||||||||| || |||| Sbjct 452 AGCTCCCAAACGGCAAACTATTCGTGCGTGCAGACATGCCTGGTGTTCCCAAAGAAAACT 511 Query 439 TCACTGTCTCTGTCACGAATGGGCGAGTGAAGGTGACTGGTGAAGCTCCTGCCGT-TG-G 496 |||||||||||||||||||||||||||| |||||||||||||||||||||| | | || | Sbjct 512 TCACTGTCTCTGTCACGAATGGGCGAGTCAAGGTGACTGGTGAAGCTCCTG-C-TCTGAG 569 Query 497 CCACCACTCAAGTGGCCGTTTCTACTCTGGTGACGTTGCTATGCTCTCCACTCCTGTTGA 556 ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 570 CCATGACTCAAGTGGCCGTTTCTACTCTGGTGACGGCGCTATGCTCTCCACTCCTGTTGA 629 Query 557 CATTCCCAGCCATCGGATCGAGACCATCGCCAAGAACGGTGTGATTGGTCTCCTTATCCC 616 ||||||||||| | ||||| |||||||||||||| ||||||| ||| ||||||||||||| Sbjct 630 CATTCCCAGCCGTAGGATCAAGACCATCGCCAAGGACGGTGTCATTCGTCTCCTTATCCC 689 Query 617 TCCATTTTG 625 ||||||||| Sbjct 690 TCCATTTTG 698 Score = 207 bits (112), Expect = 8e-53 Identities = 146/163 (90%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 27 ATGGCCGTTCCTCTTAGTACTCCTCCTCAATCTCCCGAAGGTTTTTACGCAATCAACAAC 86 ||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGCCGTTCCTCTTCCTGCTCGTCCTCAATCTCCCGAAGGTTTTTACGCAATCAACAAC 60 Query 87 CAGTTTCTGACGTCTGGGCCAAAAGGGTTCACTGAGTTCAAGATGCTGGTAAATGAAGAC 146 ||||||| |||| |||||||||||||||| ||||| ||||||| || | || | |||| Sbjct 61 CAGTTTCAGACGAATGGGCCAAAAGGGTTCTCTGAGCTCAAGATTCTAGCGAACGGAGAC 120 Query 147 ATGTTCGTGAGAATGGATTTGCCTGGAGTTCCTGAAGAAGGCG 189 ||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 121 ATGTTCGTGAGGATGGATTTGCCTGGAGTTCCTGATGAAGGCG 163 > AT4G16550.1 | Symbols: | HSP20-like chaperone | chr4:9318442-9324254 REVERSE LENGTH=2232 Length=2232 Score = 265 bits (143), Expect = 5e-70 Identities = 222/261 (85%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 360 ATGGCTTATGAGTCGAAGCAGCTCCCAGACGGCAAACTATACGTGCGTGTAGACATGCCG 419 |||||||||||||| |||||||| | | |||| ||||||||||||||||||||||| Sbjct 1966 ATGGCTTATGAGTCCAAGCAGCTTCAAAACGGTGGTCTATACGTGCGTGTAGACATGCCA 2025 Query 420 GGTGTTCCCAGTGACAACTTCACTGTCTCTGTCACGAATGGGCGAGTGAAGGTGACTGGT 479 || ||||||| || |||||||||||| | |||| ||||||| |||||| |||||| ||| Sbjct 2026 GGCGTTCCCAAAGAGAACTTCACTGTCGCAGTCATGAATGGGAGAGTGAGGGTGACCGGT 2085 Query 480 GAAGCTCCTGCCGTTGGCCACCACTCAAGTGGCCGTTTCTACTCTGGTGACGTTGCTATG 539 |||||||||||| || ||||| |||||||||| ||||||||| ||||||||||||||||| Sbjct 2086 GAAGCTCCTGCCATTAGCCACGACTCAAGTGGACGTTTCTACACTGGTGACGTTGCTATG 2145 Query 540 CTCTCCACTCCTGTT-GACATTCCCAGCCATCGGATCGAGACCATCGCCAAGAACGGTGT 598 |||||||||||| || |||||||||| || | |||| ||| ||| || ||||||||||| Sbjct 2146 CTCTCCACTCCT-TTCGACATTCCCATCCGTAAGATCAAGATCATTGCTAAGAACGGTGT 2204 Query 599 GATTGGTCTCCTTATCCCTCC 619 ||| |||| | |||||||| Sbjct 2205 CATTCGTCTGATCATCCCTCC 2225 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 31346107728 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5