BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg946614
Length=1789
Score E
Sequences producing significant alignments: (Bits) Value
AT4G16480.1 | Symbols: ATINT4, INT4 | inositol transporter 4 | ... 2828 0.0
AT2G35740.1 | Symbols: ATINT3, INT3 | nositol transporter 3 | c... 878 0.0
> AT4G16480.1 | Symbols: ATINT4, INT4 | inositol transporter 4
| chr4:9291119-9293203 FORWARD LENGTH=1996
Length=1996
Score = 2828 bits (1531), Expect = 0.0
Identities = 1695/1776 (95%), Gaps = 4/1776 (0%)
Strand=Plus/Plus
Query 13 AAGAAACAATGGTGGAAGGAGGAATTGCGAAAGCAGACAAAACAGAGTTCACTGAGTGTT 72
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 120 AAGAAACAATGGTGGAAGGAGGAATTGCGAAAGCAGACAAAACAGAGTTCACAGAGTGTT 179
Query 73 GGAGAACAACATGGAAGACACCTTACATCATGAGACTGGCTCTCTCCGCCGGAATCGGAG 132
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct 180 GGAGAACAACATGGAAGACACCTTACATCATGCGACTTGCTCTCTCCGCCGGAATCGGAG 239
Query 133 GTCTTCTCTTCGGTTACGACACTGGAGTCATTTCCGGGGCTCTTCTCTTCATTAAGGAGG 192
||||||||||||||||||| || |||||||||||||| |||||||| ||||| || || |
Sbjct 240 GTCTTCTCTTCGGTTACGATACCGGAGTCATTTCCGGAGCTCTTCTTTTCATCAAAGAAG 299
Query 193 ATTTTGATGAAGTTGATAAGAAAACATGGCTTCAGTCAACTATTGTTAGTATGGCAGTGG 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 ATTTTGATGAAGTTGATAAGAAAACATGGCTTCAGTCAACTATTGTTAGTATGGCAGTGG 359
Query 253 CTGGAGCCATCGTCGGAGCAGCAGTCGGAGGTTGGATCAATGATAGGTTTGGTAGGAGGA 312
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 360 CTGGAGCCATCGTCGGAGCAGCAGTCGGAGGTTGGATCAATGATAAGTTTGGTAGGAGGA 419
Query 313 TGTCGATTCTTATCGCTGATGTTCTTTTCTTGATCGGTGCGATTGTGATGGCATTTGCTC 372
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 TGTCGATTCTTATCGCCGATGTTCTTTTCTTGATCGGTGCGATTGTGATGGCATTTGCTC 479
Query 373 CGGCTCCGTGGGTTATCATTGTTGGAAGAATCTTTGTTGGATTTGGTGTTGGTATGGCTT 432
||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 480 CGGCTCCTTGGGTTATCATCGTTGGAAGAATCTTTGTTGGGTTTGGTGTTGGTATGGCTT 539
Query 433 CGATGACGTCGCCGTTGTACATCTCTGAAGCTTCTCCGGCGAGGATTAGAGGTGCACTTG 492
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 540 CGATGACGTCTCCGTTGTATATCTCTGAAGCTTCTCCGGCGAGGATTAGAGGTGCACTTG 599
Query 493 TTAGTACCAATGGTCTTCTCATCACTGGAGGACAATTCTTCTCTTACCTCATCAATCTTG 552
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 600 TTAGTACCAATGGTCTTCTCATCACTGGTGGACAATTCTTCTCGTACCTCATCAATCTTG 659
Query 553 CTTTTGTCCATACTCCGGGAACATGGAGATGGATGTTGGGTGTTGCGGGAATTCCAGCGA 612
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 660 CTTTTGTCCATACTCCGGGAACATGGAGATGGATGTTGGGTGTTGCGGGAGTTCCAGCTA 719
Query 613 TAGTTCAGTTTGTGCTCATGTTGTCGCTACCTGAGTCTCCAAGGTGGTTATATAGAAAGG 672
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 TTGTTCAGTTTGTGCTTATGTTGTCGCTACCTGAGTCTCCAAGGTGGTTATATAGAAAGG 779
Query 673 ACAGGGTTGCGGAATCCAGAGCGATCCTTGAGAGGATTTACCCGGCGGACGAAGTGGAGG 732
||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 780 ACAGGATTGCGGAATCCAGAGCGATTCTTGAGAGGATTTACCCGGCTGACGAAGTGGAGG 839
Query 733 CGGAGATGGAAGCTTTGAAACAGTCAGTGGAGGCAGAGAAAGCTGACGAGGCAATCATCG 792
||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |
Sbjct 840 CGGAGATGGAAGCTTTGAAACTGTCAGTGGAGGCAGAGAAAGCAGACGAGGCAATCATTG 899
Query 793 GAGATAGCTTCACCGCGAAAA-TGAAAGGAGCTTTCGGAAATCCCGTCGTTCGACGTGGA 851
||||||||||| | || ||| |||||||||||||||| |||||||| ||||||||||||
Sbjct 900 GAGATAGCTTCTCTGC-AAAGCTGAAAGGAGCTTTCGGGAATCCCGTTGTTCGACGTGGA 958
Query 852 CTTGCTGCTGGTATCACAGTGCAGGTGGCACAGCAGTTTGTGGGGATCAACACTGTCATG 911
|| |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 959 CTCGCTGCTGGTATCACGGTGCAAGTGGCTCAGCAGTTTGTGGGGATCAACACTGTCATG 1018
Query 912 TACTACAGTCCTTCAATTGTGCAATTCGCTGGTTACGCCTCCAACAAGACAGCTATGGCC 971
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 1019 TACTACAGTCCTTCTATTGTGCAATTTGCTGGTTACGCCTCTAACAAGACAGCTATGGCC 1078
Query 972 TTGTCTCTCATTACTTCTGGTTTGAATGCCTTGGGTTCGATTGTGAGCATGATGTTTGTC 1031
|||||||| |||||||| ||||||||||| |||||||| |||||||||||||||||||||
Sbjct 1079 TTGTCTCTTATTACTTCCGGTTTGAATGCTTTGGGTTCTATTGTGAGCATGATGTTTGTC 1138
Query 1032 GATCGGTACGGGAGAAGGAAGCTTATGATCATCTCTATGTTTGGGATCATAACATGTCTT 1091
||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct 1139 GATCGGTACGGGAGAAGGAAGCTCATGATCATCTCTATGTTTGGGATCATAGCATGTCTT 1198
Query 1092 ATCATCTTAGCCATCG-TGTTCTCACAAGCGGCCATTCACGCCCCCAAGATCGATGCGCT 1150
||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 1199 ATCATCTTAGCCA-CGGTGTTCTCACAAGCGGCCATCCACGCCCCCAAGATCGATGCGTT 1257
Query 1151 GGAGTCAAGGATGTTTGCTCCAAATGCTACTTGTTCAGCATATGCCCCTCTCGCAGCCGA 1210
|||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 TGAGTCAAGGACGTTTGCACCAAATGCTACTTGTTCAGCATATGCCCCTCTCGCAGCCGA 1317
Query 1211 AAACGCTCCTCCCTCGAGATGGAACTGCATGAAGTGTCTCAGGTCTGAATGTGGATTCTG 1270
||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 1318 AAATGCTCCTCCCTCGAGGTGGAACTGCATGAAGTGTCTCAGGTCCGAATGTGGATTCTG 1377
Query 1271 CGCCAGCGGAGTACAGCCGTATGCACCAGGAGCATGTGTGGTGTTGTCGGACGAGATGAA 1330
||||||||| ||||||||||| |||||||||||||||||||||||||| || || |||||
Sbjct 1378 CGCCAGCGGGGTACAGCCGTACGCACCAGGAGCATGTGTGGTGTTGTCAGATGACATGAA 1437
Query 1331 AGCAACTTGCAGCTCAAGAGGAAGAACATTCTTCAAAGATGGATGTCCAAGCAAGTTTGG 1390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1438 AGCAACTTGCAGCTCAAGAGGAAGAACATTCTTCAAAGATGGATGTCCAAGCAAGTTTGG 1497
Query 1391 GTTCTTAGCAATAGTGTTTTTGGGGCTTTACATCGTAGTCTACGCACCAGGTATGGGCAC 1450
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1498 GTTCTTAGCTATAGTGTTTTTGGGGCTTTACATCGTAGTCTACGCACCAGGTATGGGCAC 1557
Query 1451 TGTCCCGTGGATCGTCAACTCTGAGATCTATCCGCTAAGATACAGAGGTCTTGGTGGAGG 1510
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1558 TGTCCCGTGGATCGTCAACTCTGAGATCTATCCGCTCAGATACAGAGGTCTTGGTGGAGG 1617
Query 1511 AATAGCCGCCGTCTCAAATTGGGTGTCCAATCTCATTGTGAGTGAGAGTTTCCTCTCACT 1570
||||||||||||||| |||||||| ||||| || || ||||||||||| |||||||||||
Sbjct 1618 AATAGCCGCCGTCTCGAATTGGGTCTCCAACCTGATAGTGAGTGAGAGCTTCCTCTCACT 1677
Query 1571 CACCCATGCTCTTGGCTCCTCTGGGACCTTCCTTCTCTTTGCTGGCTTCTCCACGATCGG 1630
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1678 CACCCATGCTCTCGGCTCCTCTGGTACCTTCCTTCTCTTTGCTGGCTTCTCCACGATCGG 1737
Query 1631 GCTCTTCTTCATTTGGCTGCTCGTTCCTGAGACCAAAGGGCTTCAGTTTGAGGAGGTAGA 1690
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1738 GCTCTTCTTCATTTGGTTGCTCGTTCCTGAGACCAAAGGGCTTCAGTTTGAGGAGGTCGA 1797
Query 1691 GAAGTTGCTCGAGGTCGGCTACAAACCCAGTCTCTTGCGGCGGAGGAACAAGAAGGGCAA 1750
|||||||||||||||||||| ||| ||||||||||||||||||||| | |||||||||||
Sbjct 1798 GAAGTTGCTCGAGGTCGGCTTCAAGCCCAGTCTCTTGCGGCGGAGGGAGAAGAAGGGCAA 1857
Query 1751 AGAAGTCGATGCCGCTTAAGACGATGATGATCACTT 1786
|||||||||||| |||||||||||||||||||||||
Sbjct 1858 AGAAGTCGATGCTGCTTAAGACGATGATGATCACTT 1893
> AT2G35740.1 | Symbols: ATINT3, INT3 | nositol transporter 3 |
chr2:15024489-15026414 REVERSE LENGTH=1743
Length=1743
Score = 878 bits (475), Expect = 0.0
Identities = 1296/1684 (77%), Gaps = 90/1684 (5%)
Strand=Plus/Plus
Query 61 TCACTGA-GTGTTGGA-GAACAACATGGAAGACACCTTACATCATGAGACTGGCTCTCTC 118
|||| || ||| |||| | || |||||| ||||||||||||| ||| | |||||||||||
Sbjct 38 TCACAGAGGTG-TGGACG-ACGACATGGGAGACACCTTACATTATGCGGCTGGCTCTCTC 95
Query 119 CGCCGGAATCGGAGGTCTTCTCTTCGGTTACGACACTGGAGTCATTTCCGGGGCTCTTCT 178
||||| || ||||| || |||||||| ||| |||| |||||||| | |||||||||||
Sbjct 96 TGCCGGTATTGGAGGACTCCTCTTCGGATACAACACGGGAGTCATCGCAGGGGCTCTTCT 155
Query 179 CT-TCATTAAGGAGGATTTTGATGAAGTTGATAAGAAAACATGGCTTCA-GTCAACTATT 236
|| | || || ||||| |||| ||| || || || || ||||||||||| | | | |||
Sbjct 156 CTAT-ATAAAAGAGGAGTTTGGTGAGGTAGACAACAAGACATGGCTTCAGGAGATC-ATT 213
Query 237 GTTAGTATGGCAGTGGCTGGAGCCATCGTCGGAGCAGC-AGTCGGAGGTTGGAT-CAATG 294
|| || ||| | |||||||||||||| || |||||||| | | ||||| ||| | ||| |
Sbjct 214 GTGAGCATGACCGTGGCTGGAGCCATTGTTGGAGCAGCTA-TAGGAGGATGG-TACAACG 271
Query 295 ATAGGTTTGGTAGGAGGATGTC-GATTCTTATCGCTGATGTTCTTTTCTTGATCGGTGCG 353
||| |||||||||||||||||| | ||||||| || ||||| || ||| || | |||||
Sbjct 272 ATAAGTTTGGTAGGAGGATGTCTG-TTCTTATAGCGGATGTGCTCTTCCTGCTGGGTGCC 330
Query 354 ATTGTGATGG-CATTTGCTCCGGCTCCGTGGGTTATCATTGTTGGAAGAATCTTTGTTGG 412
| ||||||| | |||||| || |||||||| ||||| | || ||| |||| || ||
Sbjct 331 CTGGTGATGGTGA-TTGCTCATGCGCCGTGGGTCATCATCCTCGGCAGACTCTTGGTGGG 389
Query 413 ATTTGGTGTTGGTATGGCTTCGATGACGTCGCCG-TTGTACATCTCTGAAGCT-TCTCCG 470
||||| |||||||||||||| ||||| || ||| || |||||||||| || | |||||
Sbjct 390 TTTTGGGGTTGGTATGGCTTCTATGACCTCACCGCTT-TACATCTCTG-AGATGTCTCCT 447
Query 471 GCGAGGATTAGAGGTGCACTT-GTTAGTACCAATGGTCTTCTCATCACTGGAGGACA-AT 528
||||| || ||||| || ||| || || ||||| || ||||||||||| |||||||| |
Sbjct 448 GCGAGAATCAGAGGCGC-CTTGGTCAGCACCAACGGACTTCTCATCACCGGAGGACAGTT 506
Query 529 TCTTCTCTTACCTCATCAATCTTGCTTTTGTCCATACTCCGGGAACATGGAGATGGATGT 588
|| | ||||| |||||||| ||||| || |||||||| ||||| |||||||| |||||||
Sbjct 507 TC-TATCTTATCTCATCAACCTTGCCTTCGTCCATACACCGGGTACATGGAGGTGGATGT 565
Query 589 TGGGTGT-TGCGG-GAATTCCAGCGAT-AGTTCAGTTTGTG-CTCATGTTGTCGCTACCT 644
|||| || | ||| | ||||||||||| | ||||| || || |||||| | |||| ||
Sbjct 566 TGGGAGTCT-CGGCG-ATTCCAGCGATCA-TTCAG-TTCTGCCTCATGCTAACGCTGCCA 621
Query 645 GAGTCTCCAAGGTGGTTATATAGAAAGGACAGGGTTGCGGAATCCAGAG-CGATCCTTGA 703
||||||||| ||||| | |||||||| || ||| || || || |||| | ||||| ||
Sbjct 622 GAGTCTCCACGGTGGCTCTATAGAAATGATAGGAAAGCCGAGTCAAGAGAC-ATCCTCGA 680
Query 704 GAGGATTTACCCGGCGGACGA-AGTGGAGGCGGAGATGGAAGCTTTGAAACAGTCAGT-G 761
||| || |||||||| || || || || |||||||| | || | || |||| ||
Sbjct 681 GAGAATATACCCGGCAGA-GATGGTTGAAGCGGAGATAGCTGCACTCAAGGAGTCTGTCC 739
Query 762 GAGGCAGAGAAAGCTGACGAGGCA-ATCATCGGAGATAGCTTCACCGCGAAAATGAAAGG 820
| |||||||| |||||||||| | || ||||| ||| |||| | | || | | |||
Sbjct 740 G-GGCAGAGACGGCTGACGAGG-ATATTATCGGCCATACCTTCTCTGATAAGCTCAGAGG 797
Query 821 AGCT-T-TCGGAAATCCCGTCGTTCGACGTGGACTTGCTGCTGGTATCACAGTGCAGGTG 878
||| | || | ||||| || || || | || || || || |||||||| || |||||
Sbjct 798 CGCTCTCTC-G-AATCCAGTTGTCCGCCACGGTCTGGCCGCAGGTATCACCGTCCAGGTC 855
Query 879 GCACAGCAGTTTGTGGGGATCAACACTGTCATGTACTACAGTCCTTCAATTGTGCAATTC 938
|| |||||||||||||| |||||||| |||||||||||||||||| | ||| |||| ||
Sbjct 856 GCCCAGCAGTTTGTGGGAATCAACACAGTCATGTACTACAGTCCTACTATTCTGCAGTTT 915
Query 939 GCTGGTTACGCCTCCAACAAGACAGCTATGGC-CTTGTCTCTCATTACTTCTGGTTTGAA 997
|| |||||||| |||||||||||||| ||||| |||| ||||||| || || ||| | ||
Sbjct 916 GCAGGTTACGCATCCAACAAGACAGCCATGGCTCTTG-CTCTCATAACCTCCGGTCTCAA 974
Query 998 TGCCTTGGGTTC-GATTGTGAGCATGATGTTTGTCGATCGGTACGGGAGAAGGAAGCTTA 1056
||| |||| || | | || |||||||||||||| || || || || | | |||||||
Sbjct 975 TGCAGTGGGGTCTG-TAGTAAGCATGATGTTTGTAGACCGTTATGGTCGGCGCAAGCTTA 1033
Query 1057 TGATCATCTCTATGTTTGGGATCATAACATGTCTTATCATCTTAGCCATCGTGTTCTC-A 1115
||||||| || ||||| ||||||||||| || ||| |||| || || ||| || || |
Sbjct 1034 TGATCATTTCCATGTTCGGGATCATAACTTGCCTTGTCATTTTGGCTGCCGT-TT-TCAA 1091
Query 1116 -CAAGCGGCCATTCACGCCCCCAAGATCGATGCGCTG-GAGTCAAGGATGTTTGCTCCAA 1173
|||| | | ||||| || ||||||||| | | || || || | || || ||
Sbjct 1092 TGAAGCCTCAAACCACGCTCCAAAGATCGATAAG-AGAGACTCCAGAAACTTCGCAAAAA 1150
Query 1174 ATGCTACTTGTTCAGCATATGCCCC-TCTCGCAGCCGAAAACG--CTCCTCCCTCGAGA- 1229
||||||||||| | |||| |||||| | || ||||| || |||||||||| | |
Sbjct 1151 ATGCTACTTGTCCCGCATTTGCCCCAT-TCACAGCC--TCCCGTTCTCCTCCCTCCA-AC 1206
Query 1230 TGGAACTGCATGAAGTGTC-TCAGGT-CTGAATGTGGATTCTGCGCCAGCGGAGTACAGC 1287
||||| || |||||||||| ||| | | || || ||||||||| ||| ||||| ||||
Sbjct 1207 TGGAATTGTATGAAGTGTCTTCA-ATAC-GATTGCGGATTCTGCTCCAACGGAGCACAGG 1264
Query 1288 CGTATGCACCAGGAGCATGTGTGGTGTT--GTCGGAC-GAGATGAAAGCAACT-TG-CAG 1342
||| ||||| |||||||| | |||| ||| | | || ||||| || | | || ||
Sbjct 1265 AGTACGCACCTGGAGCATGCAT--TGTTCAGTCTG-CTGATATGAAGGC-ATTGTGCCA- 1319
Query 1343 CTC-AAGAGGAAGAACATTCTTCAAAGATGGATGTCCAAGCAAGTTTGGGTTCTTAGCAA 1401
||| || ||| ||||| ||||||||||| ||||| || |||||||| |||| | | || |
Sbjct 1320 CTCGAA-AGGCAGAACCTTCTTCAAAGACGGATGCCCCAGCAAGTTCGGGTACCTGGCCA 1378
Query 1402 TAGTGTT-TTTGGGGCTTTACATCGTAGTCTACGCACCAGGTATGGGCACTGTCCCGTGG 1460
| || || || || || |||||| | || ||||| || ||||||||||| || || |||
Sbjct 1379 TTGTCTTCCTT-GGCCTCTACATCATTGTGTACGCGCCCGGTATGGGCACAGTTCCATGG 1437
Query 1461 ATCGTCAACTCTGAGATCTATCCGCTAAGATACAGAGGTCTTG-GTGGAGGAATAGCCGC 1519
|| |||||||| ||||||||||| || | |||||||| || | | |||||||| || ||
Sbjct 1438 ATTGTCAACTCAGAGATCTATCCTCTTCGCTACAGAGGGCTCGCG-GGAGGAATCGCTGC 1496
Query 1520 CGTCTCAAATTGGGTGTCCAATCTCATTGTGAGTGAGA-GTTTCCTCTCACTCACCCATG 1578
|||||||| ||| |||| |||||| | |||||||||| | ||||| || | || | |
Sbjct 1497 AGTCTCAAACTGGATGTCAAATCTCGTAGTGAGTGAGACG-TTCCTGACATTGACAAACG 1555
Query 1579 CTCTTGGCTCCTCTGGG-ACCTTCCTTCTCTTTGCTGGCTTC-TCCACGA-TCGGGCTCT 1635
| | || || || ||| || |||||||| ||||| || || ||| | | ||||||| |
Sbjct 1556 CAGTCGGGTCATC-GGGAACATTCCTTCTATTTGCAGG-GTCATCCGC-AGTCGGGCTGT 1612
Query 1636 TCTTCATTTGGCTGCTCGTTCCTGAGACCAAAGGGCTTCAGTTTGAGGAGGTAGAGAAGT 1695
||||||| |||||||| || ||||||||||||||||||||||||||||| || || ||||
Sbjct 1613 TCTTCATCTGGCTGCTTGTGCCTGAGACCAAAGGGCTTCAGTTTGAGGAAGTGGAAAAGT 1672
Query 1696 TGCT 1699
||||
Sbjct 1673 TGCT 1676
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88503560835
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5