BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg946789

Length=277
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G15310.1 | Symbols: CYP702A3 | cytochrome P450, family 702, ...   257    3e-68


> AT4G15310.1 | Symbols: CYP702A3 | cytochrome P450, family 702, 
subfamily A, polypeptide 3 | chr4:8736721-8740047 FORWARD 
LENGTH=1428
Length=1428

 Score =  257 bits (139),  Expect = 3e-68
 Identities = 174/191 (91%), Gaps = 2/191 (1%)
 Strand=Plus/Plus

Query  25   TTGATCCCGACGTGAACATGGAGATGGCAAAGGCGAGTTCGCACTTGGGTGCTACAGAGA  84
            |||||||||||||||| |||||||| ||||||||||||||||| ||| ||||||| ||||
Sbjct  272  TTGATCCCGACGTGAATATGGAGATAGCAAAGGCGAGTTCGCAGTTGCGTGCTACGGAGA  331

Query  85   GCTTAAGGCGGATATTTGGA-AAGAACAACGTGCTCCTCCAGAGCAAGGATATTCATAAA  143
            || ||| ||||||||||||| || ||||||  | |||||||||||||||| |||||||||
Sbjct  332  GCGTAACGCGGATATTTGGAGAA-AACAACCCGTTCCTCCAGAGCAAGGAGATTCATAAA  390

Query  144  TATGTCCGGAACGTGACTACTCGATTTGTTGGTCCCGACGGTTTAAAAACAAGATTAATT  203
            |||||||||||| ||||| | ||||||||||||||||| |||||||||||||||||||||
Sbjct  391  TATGTCCGGAACTTGACTTCCCGATTTGTTGGTCCCGAGGGTTTAAAAACAAGATTAATT  450

Query  204  CATGACATTGA  214
            |||||||||||
Sbjct  451  CATGACATTGA  461



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 12717740497


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5