BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg946828
Length=2196
Score E
Sequences producing significant alignments: (Bits) Value
AT4G15080.1 | Symbols: | DHHC-type zinc finger family protein ... 3408 0.0
AT3G22180.1 | Symbols: | DHHC-type zinc finger family protein ... 1258 0.0
> AT4G15080.1 | Symbols: | DHHC-type zinc finger family protein
| chr4:8608700-8612693 REVERSE LENGTH=2893
Length=2893
Score = 3408 bits (1845), Expect = 0.0
Identities = 2088/2205 (95%), Gaps = 17/2205 (1%)
Strand=Plus/Plus
Query 2 AAGCTTTTGGTGGAAGCAAAAATGGTTAGGAAACATGGTTGGCAACTTCCTGCTCACAAA 61
||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 331 AAGCTTTGGGAGGAAGCAAAAATGGTGAGGAAACATGGTTGGCAACTTCCTGCTCACAAA 390
Query 62 TTTCAGGTGGTTGCGATTACGGTGTTTTGCTTATTGAGTGTTGCATACTATGCGTTTTTT 121
|||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 391 TTTCAGGTGGTTGCGATTACGGTGTTCTGCTTATTGAGTGTAGCATACTATGCGTTTTTC 450
Query 122 GCTCCTTTTGTTGGAGGACGCATTTGGGGGTATATTCTTCTCGGTGTTTACTCTCCTGTG 181
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct 451 GCTCCTTTTGTTGGAGGACGCATCTGGGAGTATATTCTTCTCGGTGTTTACTCTCCTGTG 510
Query 182 GCTCTTATTGTTTTCGTTCTTTATGTTCGGTGTACTGCAATCAATCCTGCGGATCCAGGA 241
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 511 GCTCTTATTGTTTTCGTTCTTTATGTTCGTTGTACTGCAATCAATCCTGCTGATCCAGGA 570
Query 242 ATCATGTCGAAATTCGATAGGGGTGCGAACAGAGGTGATGATTTACCTGCTGCCAAAGAT 301
||||||||||||||||| || ||||||| ||||||| ||| |||||| |||||||||||
Sbjct 571 ATCATGTCGAAATTCGAAAGAGGTGCGAGTAGAGGTGGTGACTTACCTACTGCCAAAGAT 630
Query 302 ATCTCAAGAAAATTCGATGAAACAGGCAGTCAGCTGCAGTCTTCTCCTTCGGTTGCTTCG 361
||||| |||||||| |||||||| ||||| || ||||||||||| ||||||||||||||
Sbjct 631 ATCTCGAGAAAATTTGATGAAACGGGCAGCCACCTGCAGTCTTCCCCTTCGGTTGCTTCC 690
Query 362 AGGACTTCTACTTTACCAGCAAACTCTAGCGTGAAGGGTTCTGTAGGAGATGCTCAAAGA 421
||||||||||||||| | |||||||||| ||||| |||||||| |||||||||||||||
Sbjct 691 AGGACTTCTACTTTA-C--CAAACTCTAGTGTGAAAGGTTCTGTTGGAGATGCTCAAAGA 747
Query 422 GTGGAAGATGCTaaaa-aaaaTTCTTGCTTTAATCCTTTGGCGATATGCTGTGGCGTGTT 480
||||||| |||||||| |||| |||||||||||||| ||||| |||||||||||||||||
Sbjct 748 GTGGAAGCTGCTAAAAGAAAA-TCTTGCTTTAATCCGTTGGCAATATGCTGTGGCGTGTT 806
Query 481 TGTTTATGAAGATTGTCGTAGCAAAGATGAGACGGATGAACAGCAGGGGGATAGGGAAGA 540
||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||
Sbjct 807 TGTTTATGAAGATTGTCGTAGCAAAGAAGAGACGGATGAGCAGCAAGGGGATAGGGAAGA 866
Query 541 AGCTCTGTTTTGCACGTTGTGCAATGCTGAGGTCCGTAAGTTTAGCAAGCATTGTCGAAG 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 867 AGCTCTGTTTTGCACGTTGTGCAATGCTGAGGTCCGTAAGTTTAGCAAGCATTGTCGAAG 926
Query 601 CTGCGACAAATGTGTAGATTGTTTCGATCATCATTGCCGGTGGCTTAACAATTGTGTCGG 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 927 TTGCGACAAATGTGTAGATTGTTTCGATCATCATTGCCGGTGGCTTAACAATTGTGTTGG 986
Query 661 TCGCAAGAATTATATGACTTTTATATCCCTGATGGCTGTCAGTCTTCTCTGGCTCCTTAT 720
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 987 TCGCAAGAATTATATGACTTTTATATCGCTGATGGCTGTCAGTCTTCTCTGGCTCCTTAT 1046
Query 721 TGAAGCAGGAGTTGGGATTGCAGTTATAGTGCGTGTGTTTGTTAATAAAAAGGACATGGA 780
|||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1047 AGAAGCAGGAGTTGGAATTGCAGTTATAGTGCGTGTATTTGTTAATAAGAAGGACATGGA 1106
Query 781 AACCGAAATCGTCAATAGACTTGGAAATGGATTTTCTCGGGCACCTTTTGCCACTGTTGT 840
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1107 AACAGAAATCGTCAATAGACTTGGAAATGGATTTTCTCGGGCACCTTTTGCCACAGTTGT 1166
Query 841 TGGTCTCTGTACTGCTGTTTCCATGCTGGCATTGTTTCCATTGGGTGAACTTTTCTTTTT 900
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1167 TGGTCTCTGTACTGCTGTTTCCATGCTGGCATTGTTTCCATTAGGTGAACTTTTCTTTTT 1226
Query 901 CCACATGCTCCTCATTAAAAAGGGCATTACAACTTACGAGTATGTTGTGGCAATGAGAGC 960
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1227 CCACATGCTCCTCATTAAAAAGGGCATTACAACTTATGAATATGTTGTGGCAATGAGAGC 1286
Query 961 AATGAGCGAGGCACCAGCTGGAGCTTCGATTGATGAGGAACTTCCTAACGTGCTGTATTC 1020
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1287 AATGAGCGAGGCACCAGCTGGAGCTTCGATTGATGAGGAAATTCCTAACGTGCTGTATTC 1346
Query 1021 TCCCTCTGGATCTGCCACGACCGGCTTTAGTGGTGGAAGCTCCCTCGGAT-TACCATACA 1079
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 1347 TCCCTCTGGATCTGCCACGACCGGCTTTAGTGGTGGAAGCTCCCTCGG-TCTACCATACA 1405
Query 1080 AGGGAGCCTGGTGTACTCCTCCTAGAGTGTTTGTTGATTATCAGGATGAAGTGATTCCTC 1139
| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1406 AAGGAGCATGGTGCACTCCTCCTAGAGTGTTTGTTGATTATCAGGACGAAGTGATTCCTC 1465
Query 1140 ATTTGGACCC-CAGAATGGTTCCGTCGACCGTAGATCCAGATGCAGCTGAAACTGCAGAG 1198
||||||| || | || ||||||| || |||||||||||||||||||||||||| ||||||
Sbjct 1466 ATTTGGATCCTCGGA-TGGTTCCATCAACCGTAGATCCAGATGCAGCTGAAACAGCAGAG 1524
Query 1199 AGGGGCAACAAGATTCCAAAGAGACCTGTCAAAATTAGTGCTTGGAAACTCGCAAAATTG 1258
||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||
Sbjct 1525 AGGGGCAACAAGATTCCAAAGAGACCTGTCAAAATTAGTGCTTGGAAGCTTGCAAAACTG 1584
Query 1259 AATTCAAATGAAGCTACAAGGGCAGCAGCCAGAGCCAGAGCATCCTCATCTGTCTTAAGA 1318
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct 1585 AATTCAAATGAAGCTACAAGAGCAGCAGCCAGAGCCAGAGCATCCTCATCTGTCCTAAGA 1644
Query 1319 CCAATAGAAAACCGTCATTTACATGATGATGAGCTTAGTTCCAGAAGTGGCACCATCAGT 1378
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1645 CCAATAGAAAATCGTCATTTACATGATGATGAACTTAGTTCCAGAAGTGGCACCATCAGT 1704
Query 1379 GTAGTCAGCAGTGTAAGCACAGAAGCAAATGGGGCTGTGTTGAGTAAAGAAATAAGAAAC 1438
|| || |||||||||||||||||||||||||| ||| | |||||| ||| |||||||||
Sbjct 1705 GTTGTAAGCAGTGTAAGCACAGAAGCAAATGGAGCTACGCTGAGTAGAGAGATAAGAAAC 1764
Query 1439 AATGATCCAAGGTTGTCTCATTCTAGAAACTCTTTTGCTCCAAGCCAAGGTAGTCGGGAC 1498
|||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 1765 AATGATCCAATGTTGTCTCATTGTAGAAACTCTTATGCTCCAAGCCAAGGTAGTCGGGAC 1824
Query 1499 GAGTACGACACGGGGACCCATAGTGTGAGCAGTTTCAGCAGTCCAAGTCATGTTCATGAG 1558
||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1825 GAGTACGACACAGGGACCCATAGTATGAGCAGTCTCAGCAGTCCAAGTCATGTTCATGAG 1884
Query 1559 ACCGTCACACTTAGTCCTCTACCC-CAGTATCATACAGCTGGCCACCGCTTCACTGCAGC 1617
|||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||
Sbjct 1885 ACCGTCACACTTAGTCCTCT-CCCTCAGCATCATACAGCTGGCCACCGCTTCACTGCAGC 1943
Query 1618 GGCCGCGTCAAATTCTTCCCGGCCACCTCTTAATCCAGCAACTAATCACATGATCCACTC 1677
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1944 GGCCGCGTCGAATTCTTCCCGGCCACCTCTTAATCAAGCAACTAATCACATGATCCACTC 2003
Query 1678 AACCTTTGATGAAAAGATAATGCAGAAAGGAAACCACGCTGATCCACTGCTTCTCCCTGC 1737
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 2004 AACCTTTGATGAAAAGATAATGCAGAAAGGAAACCATGCAGATCCACTGCTTCTCCCTGC 2063
Query 1738 TCCTGCAGCTTCTCTTCTGAGAGATGTGAGAAGAACATCAGTTGTTTGGGACCAAGAGGC 1797
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2064 TCCTGCTGCTTCTCTTCTGAGAGATGTGAGAAGAACATCAGTTGTTTGGGACCAAGAAGC 2123
Query 1798 AGGTAGATATATATCAGTTCCTGCAACAACATCTGAGCCAAGAACCAGATTATCCTCACA 1857
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2124 AGGTAGATATATATCAGTTCCTGCAACAACATCTGAGCCAAGAACCAGATTCTCCTCACA 2183
Query 1858 GAACCAGCCAATTCCTAGCTCACACATGGGTAACACTCAGAATCCAAGACCCGTTGTTCA 1917
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2184 GAACCAGCCAATTCCTAGCTCACACATGGGTAACACTCAGAATCCAAGACCCGTTGGTCA 2243
Query 1918 TCCGCCTCAAGATTCATCGTCTGGAAGGGCTCCACCTCC---GCAGCAGCA--A-GGAGA 1971
||||||||||||||| || |||||||||||||||||||| ||||||||| | |||||
Sbjct 2244 TCCGCCTCAAGATTCTTCATCTGGAAGGGCTCCACCTCCTACGCAGCAGCAGCAAGGAGA 2303
Query 1972 GAGACTGATGTATACAGGTGACTCAATATTCTTTGGAGGGCCCCTGGTAAATATCCCGAA 2031
||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| ||
Sbjct 2304 GAGACTGATGTATACAGGTGAATCAATATTCTTTGGAGGCCCCCTAGTAAATATCCCAAA 2363
Query 2032 TAGAGATAGCCTAAGACACGATGGAGACTCGGGAAGAGAGGGACAAGACAGAATGACATT 2091
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2364 TAGAGATGGCCTAAGACACGATGGAGACTCGGGAAGAGAGGGACAAGACCGAATGACATT 2423
Query 2092 GACATTGCCTCGGGAAGCTAGATTCAAAAGAGACACAACCTCAAACCAGCTTCCAGTGTT 2151
||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 2424 AACACTGCCTCGGGAAGCTAGATTCAAAAGAGACACTACCTCAAACCAACTTCCAGTGTT 2483
Query 2152 TGCTCCTGTAGGTACCCGCAAGTAAACCATCACTCTGTCAAGGCT 2196
|||||||||||||||||||||||||||||||| ||| | ||||||
Sbjct 2484 TGCTCCTGTAGGTACCCGCAAGTAAACCATCAGTCTTTGAAGGCT 2528
> AT3G22180.1 | Symbols: | DHHC-type zinc finger family protein
| chr3:7827036-7830813 FORWARD LENGTH=2580
Length=2580
Score = 1258 bits (681), Expect = 0.0
Identities = 1326/1627 (81%), Gaps = 86/1627 (5%)
Strand=Plus/Plus
Query 23 ATGGTTAGGAAACATGGTTGGCAACTTCCTGCTCACAAAT-TTCAGGTGGTTGCGATTAC 81
||||| |||||||| |||||||||||||| |||||| | | |||||||| |||| |||||
Sbjct 155 ATGGTGAGGAAACACGGTTGGCAACTTCCCGCTCAC-ACTCTTCAGGTGATTGCAATTAC 213
Query 82 GGTGTTTTGCTTATTGAGT-GTTGCATACTATGCGTTT-TTTGCTCCTTTTGTTGGAGGA 139
|||||||||||| ||| || || || | |||||| ||| || |||||||||||||||||
Sbjct 214 GGTGTTTTGCTTGTTG-GTGGTCGCTTTCTATGC-TTTCTTCGCTCCTTTTGTTGGAGGT 271
Query 140 CGCATTTGGGGGTATATTCTT-CTCGGTGTTTACTCTCCTGTGGCTCTTATTGT-TTTCG 197
|| ||||||| || || || |||||||||||||||| |||||| || |||| ||| |
Sbjct 272 CGTATTTGGGAATACGTT-TTGATCGGTGTTTACTCTCCCGTGGCTATTCTTGTGTTT-G 329
Query 198 TTCTT-TATGTTCGGTGTACTGCAATCAATCCTGCGGATCC-AGGAATCATGTCGAAATT 255
|| || ||||||||||||||||||||||||||||||||||| || ||||||||||| |||
Sbjct 330 TT-TTGTATGTTCGGTGTACTGCAATCAATCCTGCGGATCCGAG-AATCATGTCGATATT 387
Query 256 CGATAGGGGTGCGAACAGAGGTG--ATGATTTACCTGCTGCCAAAGATATCTCAAGAAAA 313
|||| || | ||| ||| || ||| || | || || |||| ||| ||
Sbjct 388 TGATACAGGCGTGAATGGAGATGGCATGGTT--CGTG--GCT-----TATC--AAGGAAT 436
Query 314 T-TCGATGAAACAGGCAGTCAGCTGCAGTCTTCTCCTTCGGTTGCTTC-G-AGGACTTCT 370
| | |||||||| || |||||| ||||| ||||||||||||||| | | | |||| ||||
Sbjct 437 TAT-GATGAAACTGGTAGTCAGTTGCAGGCTTCTCCTTCGGTTG-T-CAGTAGGAGTTCT 493
Query 371 ACTTTACCAGCAAACTCTAGCGTGAAGGGTTCTGTAGGAGATGCTCAAAGAGTGGAAGAT 430
|| | | | ||||||||| ||||| |||||||||| ||||||||||||||||||| |
Sbjct 494 ACCGTGGCTGGAAACTCTAGTGTGAAAGGTTCTGTAGAAGATGCTCAAAGAGTGGAATCT 553
Query 431 GCTaaaaa-aa-aTTCTTGCTTTAATCCTTTGGC-GATATGCTGTGGCGTGTTTGTTTAT 487
| ||| | || || |||||| ||||||| |||| | | | |||| ||||||||| |
Sbjct 554 G-TAAGTAGAAGAT-CTTGCTATAATCCTCTGGCAGTTTT-CTGTTATGTGTTTGTTG-T 609
Query 488 G-AAGATTGTCGTAGCAAAG-ATGAGACGGATGAACAGCAGGGGGATAGGGAAGAAGCTC 545
| |||| || || | |||| | | | ||| ||| | || || | || ||||| ||||
Sbjct 610 GGAAGACTGCCGGAA-AAAGGAAGGGCCGGCGGAAGAACAAGGAAACAGCGAAGAGGCTC 668
Query 546 TGTTTTGCACGTTGTGCAAT-GCTGAGGTCCGTAAGTTTAGCAAGCATTGTCGAAGCTGC 604
|||||||||| ||||||||| | |||||| || ||||| ||||||||||||||||| ||
Sbjct 669 TGTTTTGCACATTGTGCAATTG-TGAGGTACGCAAGTTCAGCAAGCATTGTCGAAGTTGT 727
Query 605 GACAAATGTGTAGATTGTTTCGATCATCATTGCCGGTGGCTTAACAATTGTGTCGGTCGC 664
|| |||||||| |||||||| ||||| |||||| ||||||||||||||||||||||||
Sbjct 728 GATAAATGTGTTGATTGTTTTGATCACCATTGCAAGTGGCTTAACAATTGTGTCGGTCGT 787
Query 665 AAGAATTATATGACTTTTATATCCCTGATG-GCTGTCAGTCTTCTCTGGCTCCTTATTGA 723
|| || ||| |||||||| | || |||||| | || |||||||||||||||| |||||||
Sbjct 788 AAAAACTATGTGACTTTTGTCTCTCTGATGAG-TGCCAGTCTTCTCTGGCTCATTATTGA 846
Query 724 AGCAGGAGTTGGGATTGCAGTTATAGTGCGTGTGTTTGTTAATAAAAAGGAC-ATGGAAA 782
||||| |||||| |||||||||||||||||||| ||||||||||| || || |||||||
Sbjct 847 AGCAGCAGTTGGAATTGCAGTTATAGTGCGTGTATTTGTTAATAAGCAG-ACCATGGAAA 905
Query 783 CCGAAATCGTCAATAGACTTGGAAATGGATTT-TCTCGGGCACCTTTTGCCACTGTTGTT 841
| ||||| |||||||||||||||||| | ||| ||||| |||||||| || | ||||||
Sbjct 906 CTGAAATTGTCAATAGACTTGGAAATAG-TTTCTCTCGTGCACCTTTGGCGGCAGTTGTT 964
Query 842 GGTCTCTGTACTGCTGTTTCCATGCTGGCATTGTTT-CCATTGGGTGAACTTTTCTTTTT 900
||||| || ||||||||| |||| | |||| |||| ||| ||||||||||| |||||||
Sbjct 965 GGTCTTTGCACTGCTGTTGCCATTTTCGCAT-GTTTTCCACTGGGTGAACTTCTCTTTTT 1023
Query 901 CCACATGCTCCTCATTAAAAAGGGCATTACAACTTACGAGTATGTTGTGGCAATGAGAGC 960
||||||||| |||||||||||||| |||||||| || |||||||||||||||||||||||
Sbjct 1024 CCACATGCTTCTCATTAAAAAGGGAATTACAACATATGAGTATGTTGTGGCAATGAGAGC 1083
Query 961 AATGAGCGAGGCACCAGCTGGAGCTTC-GATTGATGAGGAACTTCCTAACGTGCTGTATT 1019
||||||||||| |||| |||||| || | |||| |||||| ||| || ||||| ||||
Sbjct 1084 CATGAGCGAGGCGCCAGATGGAGCATCTG-TTGACGAGGAAATTCAGAATGTGCTCTATT 1142
Query 1020 CTCCCTCTGGATCTGCCACGACCGGCTTTAGTGGTGGAAGCTCCCTCGGATTACCATACA 1079
||||| |||| ||||| || ||||||||||||||||||||||| ||||| ||||||||||
Sbjct 1143 CTCCCACTGGGTCTGCTACAACCGGCTTTAGTGGTGGAAGCTCTCTCGGTTTACCATACA 1202
Query 1080 AGGGAGCCTGGTGTACTCCTCCTAGAGTGTTTGTTGATTATCAGGATGAAGTGATTCCTC 1139
||| | |||||| ||||| ||||||||||||| | | ||||||||||||| |||||||
Sbjct 1203 GGGGGGTCTGGTGCACTCCACCTAGAGTGTTTGAT-A--ATCAGGATGAAGTCATTCCTC 1259
Query 1140 ATTTGGACCCCAGAATGGTTCCGTCGACCGTAGATCCAGATGCAGCTGAAACTGCAGAGA 1199
|||| ||||| | ||||| ||||| |||||||| ||||||||| ||| | | ||||||
Sbjct 1260 ATTTAGACCCTTGCATGGTCCCGTCAACCGTAGACCCAGATGCACCTGGA--T-CAGAGA 1316
Query 1200 GGGGCAAC-AAGATTCC-AAAGAGACCTGTCAAAAT-TAGTGCTTGGAAACTCGCAAAAT 1256
|||| | ||| || ||| |||||||| |||| || ||| ||||| || ||||| |
Sbjct 1317 AAGGCA-CTAAGGCTCTGAAA-AGACCTGT-AAAACGTAATGCATGGAAGCTTGCAAAGT 1373
Query 1257 TGAATTCAAATGAAGCTACAAGGGCAGCAGCCAGAGCCAGAGCATCCTCATCTGTCTTAA 1316
|| || ||||||||||| |||||||||| |||||||||||||| || ||||||||| |||
Sbjct 1374 TGGATCCAAATGAAGCTGCAAGGGCAGCTGCCAGAGCCAGAGCGTCATCATCTGTCCTAA 1433
Query 1317 GACCAATAGAAAACCGTCATTTACATGATGATGAGCTTAGTTCCAGAAGTGGCACCA-TC 1375
|||| ||||| || || ||||||| |||| |||| |||||||||| |||||| | |
Sbjct 1434 GACCGATAGATAATCGCCATTTACCTGATAATGATCTTAGTTCCAT---TGGCAC-AGTT 1489
Query 1376 AGTGT-AGTCAGCAGTGTAAGCACAGAAGCAAATGGGGCTGTGTTGAGTAAAGAAATAAG 1434
||| | | |||| |||||||||||||| ||||||| ||||| |||||||| |||||
Sbjct 1490 AGTATCA-TCAGTAGTGTAAGCACAGATGCAAATGTGGCTGCA---AGTAAAGAGATAAG 1545
Query 1435 AAACAATGATCCAAGGTTGTCTCATTCTAGAAACTCTTTTGCTCCAAGCCAAGGTAGTCG 1494
|||||||||| ||||| |||| |||||||||||| |||||||||||||||||||| ||
Sbjct 1546 GAACAATGATCTAAGGTCATCTCTTTCTAGAAACTCGTTTGCTCCAAGCCAAGGTAGCCG 1605
Query 1495 GGACGAGTACGACACGGGGACCCATAGTGTGAGCAGT-TTCAGCAGTCCAAGTCATGTTC 1553
||| ||||| ||||| |||| |||| || |||||| | || ||||||||||| |||||||
Sbjct 1606 GGATGAGTATGACACAGGGAGCCATGGTATGAGCAATCTT-AGCAGTCCAAGCCATGTTC 1664
Query 1554 ATGAGACCGTCACACTTAG-TCCTCTACCC-CAGTATCATACA---GCTGGCCACCGCTT 1608
| ||| | ||||||||| | ||| || ||| || ||| |||| | |||| | |||||
Sbjct 1665 ACGAGTCTGTCACACTT-GCTCCACT-CCCTCAAAATCCTACAATAGTTGGCAATCGCTT 1722
Query 1609 CACTGCA 1615
|||||||
Sbjct 1723 CACTGCA 1729
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 108935182650
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5