BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg946845
Length=4201
Score E
Sequences producing significant alignments: (Bits) Value
AT4G14970.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 4383 0.0
> AT4G14970.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures;
EXPRESSED DURING: 6 growth stages; Has 257 Blast hits to
164 proteins in 70 species: Archae - 0; Bacteria - 4; Metazoa
- 189; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes
- 26 (source: NCBI BLink). | chr4:8553643-8561664 FORWARD
LENGTH=4681
Length=4681
Score = 4383 bits (2373), Expect = 0.0
Identities = 2665/2806 (95%), Gaps = 20/2806 (1%)
Strand=Plus/Plus
Query 1252 AGATTCTAGGTGCCCTTGTGACACATGTGGGATCTGATAACAAATTTGAGGTCAGTTCTG 1311
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1563 AGATTCTAGGTGCCCTAGTGACACATGTGGGATCTGATAACAAATTTGAGGTCAGTTCTG 1622
Query 1312 TCTTGGAGATGATGACAGCTCTGGTGAAAAAATATGCACTGCAACTCCTTCCCTTTTCTT 1371
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct 1623 TCTTGGAGATGATGACAGCTCTGGTGAAAAAATATGCACAGCAACTCCTCCCCTTTTCTT 1682
Query 1372 CCCACATAAATGGTATCTCTGGAACTTGTATTTTGGACTACTTAGAGGGATTTACAATTG 1431
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1683 CCCACATAAATGGTATCTCTGGAACTTGTATTTTGGACTACTTAGAGGGATTTACTATTG 1742
Query 1432 AAAATTTGCATAAGGTCTATGAGGTTTTCAGTCTCCTCGCACTATCAGCTCGTGCAAGTG 1491
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1743 ATAATTTGCATAAGGTCTATGAGGTTTTCAGCCTCCTCGCACTATCAGCTCGTGCAAGTG 1802
Query 1492 GCGATTCTTTTCGATCTTCAATTTCAAATGAACTTATGATGATAGTAAGGAAGCAGGTTA 1551
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1803 GTGATTCTTTTCGATCTTCAATCTCAAATGAACTTATGATGATAGTAAGGAAGCAGGTTA 1862
Query 1552 GTCATCCAGACCTCAAGTACAAAAAGATGGGCTTAGTTGGAAGTCTTACAATTGTTTCGT 1611
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1863 GTCATCCAGACCTCAAGTACAAAAAGATGGGCTTAGTTGGAAGTCTTAGGATTGTTTCGT 1922
Query 1612 CACTTGGGGATGCAAATAGTGTTCCTGACTTCTCATCATCGCAGGTTTCAGATTGTGGGG 1671
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1923 CACTTGGGGATGCAAAGAGTGTTCCTGACTTTTCATCATCGCAGGTTTCAGATTGTGGGG 1982
Query 1672 AGATTTTGGAGCTCTTAAAGACATCTGTTGACTCTTGCAGACAGTCTAACTTAGCCCTAA 1731
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 1983 AGATTTTGGAGCTCTTAAAGACATCTGTTGAATCTTGCAGACAGTCGAACTTAGCCCTAA 2042
Query 1732 TTATGTTCTATGATGAATTTGCTACCATTCTTAGCCAAAAATTACTTCAACCAGAAATTA 1791
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 2043 TTATGTTCTATGATGAATTCGCTACCATTCTTAGCCATAAATTACTTCAACCAGAAATTA 2102
Query 1792 TGGAGTGGATTGGGAAGCATCTGGGGGAATTTGAGTCGCTATTTCTAGCCGATCTTGAAA 1851
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 2103 TGGAGTGGATTGGGAAGCATCTGGGAGAATTTGAGTCGCTTTTTCTAGCCGATCTTGAAA 2162
Query 1852 ACGGAAAA-ATGGCTGATAAGGGTTCATATTCTGGACTAGAAGGGGATCTTTGGATGAAC 1910
|| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2163 AC-GAAAAGATGGCCGAAAAGGGTTCATATTCTGGACTAGAAGGGGATCTTTGGATGAAC 2221
Query 1911 TTGGATGGTAGTATATCACCAATCTGTTTGAATATTTTGGCCCTGGCATCTTCATCCTCA 1970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2222 TTGGATGGTAGTATATCACCAATCTGTTTGAATATTTTGGCCCTGGCATCTTCATCCTCA 2281
Query 1971 GAGTCCTGTTGTCTGCAAATTCTTCCTTCAAATTTTCTTTTGCTATCAACTGTTGAGAGG 2030
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2282 GAGTCCTGTTGTCTGCAGATTCTTCCTTCAAATTTTCTTTTGCTATCAACTGTTGAGAGG 2341
Query 2031 TTGACAAATGATGGATCCCTTGCCGGGATTGATGCTCTGCTCGGATGCCCTTTGCACCTT 2090
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2342 TTGACAAATGATGGATCCCTTGCCGGGGTTGATGCTCTGCTCGGATGCCCTTTGCACCTT 2401
Query 2091 CCTTCTTCAAAGTACTTTGCTGCAGCTAGTTGGCAGTCGCTGGCAAAGAAGCAGAAAGAA 2150
||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 2402 CCTTCTTCAAAGTACTTTGCTGCAGCTGGTTGGCAGTCTCTGGCAAAGAAGCAGAAAGAA 2461
Query 2151 ATCctctctctctctTTATATTATGCTGCAAACTGGATACGAGAACTCCTGAACGCCTTT 2210
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2462 ATCCTCTCCCTCTCGTTATATTATGCTGCAAACTGGATACGAGAACTCCTGAACGCCTTC 2521
Query 2211 AGTTCCCAAATTGATGAAAAAATTGGTTGCATTAGTCAGGCTACAGAAAAGGATGTTACA 2270
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||
Sbjct 2522 AGTTCCCAAATTGATGAAAAAATTGGTTGCATTAGTCAGGCTACTGTAAAGGATGTAACA 2581
Query 2271 ACAAAGCTTCTAAAGCGACTCAGAAATTTAGTATTCCTGGAAAGCTTATTGAGCAATTTG 2330
|||||||||||||| || |||||||||||||||||| |||||||||||||||| ||||||
Sbjct 2582 ACAAAGCTTCTAAAACGCCTCAGAAATTTAGTATTCTTGGAAAGCTTATTGAGTAATTTG 2641
Query 2331 ATTACACTATCTCCTCAGTCTCTACCAGAGCTCCACCCTTATTCTGAATCTCATGTAGAA 2390
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2642 ATTACACTATCTCCTCAGTCTCTACCGGAGCTCCACCCTTATTCTGAATCTCATGTAGAA 2701
Query 2391 AATCCGGGGAAGAAGAACGAGAAAAGGAAGCTAGACGATGATGCCTCCCAACGCAAGGGA 2450
||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||| |
Sbjct 2702 CATCCGAGGAAGAAGAACGAGAAGAGGAAGCTGGACGATGATGCCTCCCAACGCAAGGTA 2761
Query 2451 AGCATGAAAAATAACTTGAAAAAATCAAAGCACTCAAATGTGAATGAAAAGCTGCGACAG 2510
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2762 AGCATGAAAAATAACTTGAAAAAATCAAAGCACTCAGATGTGAATGAAAAGCTGCGACAG 2821
Query 2511 CCAACTATTATGGACGCATTCAAGAAAGCAGGAGCAGCGATGAGTCAAAGTCAAACACAG 2570
||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 2822 CCAACTATTATGGACGCATTCAAGAAAGCAGGAGCAGTGATGAGTCATAGTCAAACACAG 2881
Query 2571 CTACATGGAACCCCTTCCCTCCCATCTTTAAATGGCAGCACAGCAGCAGGGTCCGTGGAC 2630
||| ||||||||||||||| |||||| | |||||||||||||||| ||||| |||||
Sbjct 2882 TTACGTGGAACCCCTTCCCTTCCATCTATGGATGGCAGCACAGCAGCGGGGTCAATGGAC 2941
Query 2631 GACAACTGTTCTGATAATGAATCTTTAATTGTGAAGATTCCTCAAGTTTCCTCGGCACTT 2690
|| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2942 GAAAATTGTTCTGATAATGAATCTCTAATTGTGAAGATTCCTCAAGTTTCCTCGGCACTT 3001
Query 2691 GAAGCTCAAAGATTCAAGTTCAGGCCTCTTCTTCCTCAATGCCTTTCCATCTTAAATTTT 2750
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3002 GAAGCTCAAAGATTTAAGTTCAGGCCTCTTCTTCCTCAATGCCTTTCCATCTTAAATTTT 3061
Query 2751 CCAAAGGTTCTAAGCCAAGACATAGGCAGCCCTGAGTATAAAGCTGAGCTACCCGTGTAT 2810
||||||||||||||||||||||| |||||||||||||||| ||||||||| || |||||
Sbjct 3062 CCAAAGGTTCTAAGCCAAGACATGGGCAGCCCTGAGTATAGAGCTGAGCTGCCTTTGTAT 3121
Query 2811 CTGTATCTCTTACATGATCTTCACAACAAGCTGGATTGTCTTGTTCCTCATGGTAAACAA 2870
|||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 3122 TTGTATCTCTTACATGATCTTCACACCAAGCTGGATTGTCTTGTTCCTCCTGGTAAACAA 3181
Query 2871 CAACCTTTTAAACGTGGAAGTGCTACAGGTTATTTCGGGAGATTCAAATTGGTTGAACTT 2930
|| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 3182 CATCCTTTTAAACGTGGAAGCGCTCCAGGTTATTTCGGGAGATTCAAATTGGTTGAACTT 3241
Query 2931 CTCAGTCAAATTAAAGGACTTTTTCCAAGCCTCAGGATACATTTGAATATAGCTATTTCC 2990
|||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3242 CTCAACCAAATTAAAAGACTTTTTCCAAGCCTCAGGATACATTTGAATATAGCTATTTCC 3301
Query 2991 TTGCTAATAAAAGGTGATGAAACTTCTCAAACTAGTTGGAGAGATGAGTTTGCTATGGCC 3050
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||| || ||
Sbjct 3302 TTGCTAATAAGAGGTGATGAAACTTCTCAAACTACTTGGAGAGATGAGTTTGCTTTGTCC 3361
Query 3051 GGAAATCCGAACATGTCCAATATTGTGGTTTCTGAATCTCTGGTTTACACAATGGTGTGC 3110
||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 3362 GGAAATCCGAACACATCCAGTATTGTGGTTTCTGAATCTCTGGTTTACACAATGGTGTGC 3421
Query 3111 AAAGAAGTTTTATACTGTTTCAGCAAGATGTTGACCCTCCCTGAGTTTGAAACAGACAAG 3170
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 3422 AAAGAAGTATTATACTGTTTCAGCAAGATATTGACCCTCCCCGAGTTTGAAACAGACAAG 3481
Query 3171 TCACTGCTGCTGAATCTTCTTCAAGCCTTCCAGCCAACTGAAATACCAGTAGCTAGCTTT 3230
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 3482 TCACTGTTGCTGAATCTTCTTGAAGCCTTCCAGCCAACTGAAATACCAGTAGCTAACTTT 3541
Query 3231 CCGGACTTTCAACATTTCCCGTCACCTGGGACAAAGGAGTACTTGTATATTGGCGTTTAT 3290
||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| |
Sbjct 3542 CCGGACTTTCAACCTTTTCCGTCACCGGGGACAAAGGAGTACTTGTATATTGGCGTTTCT 3601
Query 3291 TATTTCTTTGAAGATATTTTGAATAAAGGTAATTATTTT-GCTTGGTTTACTGATGATTC 3349
|||||||||||||||||||||||||||||||| |||||| | || ||||||||||||||
Sbjct 3602 TATTTCTTTGAAGATATTTTGAATAAAGGTAACTATTTTTG-TTCGTTTACTGATGATTT 3660
Query 3350 CCCCTATGCATGTTCCTTCTCCTTTGATCTGGCCTTTGAATGTCTTCTCATTCTACAGTT 3409
||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3661 CCCCTATCCATGTTCCTTCTCCTTTGATCTGGCCTTTGAATGTCTTCTCACTCTACAGTT 3720
Query 3410 GGTGGTGACCTCTGTACAAAAATATATTGGTAAGGTATCTGAAGAGGCTAACAAAAAGAG 3469
|||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||
Sbjct 3721 AGTGGTGACCTCTGTACAAAAATATCTTGGTAAGGTATCTGAAGAAGCTAACAGAAAGAG 3780
Query 3470 AAACCCGGGTCATTTTCAGGGTCTTGTACCCAGCCTACATGCCAAACTGGGAACTTCTGC 3529
|||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct 3781 AAACCCAGGTCATTTTCATGGTCTTGTACCCAATCTACATGCCAAACTGGGAACTTCTGC 3840
Query 3530 TGAGAAACTTCTCAGGCATAAATGGGTCGATGAAAGTACTGATAATAAGGGTTTAAAGAA 3589
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3841 TGAGAAACTTCTCAGGCATAAATGGGTCGATGAAAGTACTGATAATAAGGGCTTAAAGAA 3900
Query 3590 CAAAGTATGTCCATTTGT--C---TTTG-GGTT--TCCG-----CAGGGTGAAATGGTTC 3636
|||||||||||||||||| | |||| || | | | |||| |||||||||||
Sbjct 3901 CAAAGTATGTCCATTTGTGTCAAATTTGCGGATAGTACAATTTACAGG-TGAAATGGTTC 3959
Query 3637 AGACCATATTGCGAATATACCTGGAAGCCAGTGGATCCACATCTGATTTGCTTGATGAGC 3696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3960 AGACCATATTGCGAATATACCTGGAAGCCAGTGGATCCACATCTGATTTGCTTGATGAGC 4019
Query 3697 TTGCTTGTAACATTTTACCTCAGGCGTCTCTATCCAAGTCAACAGGAGAAGATGATGATG 3756
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 4020 TTGCTTGTACCATTTTACCTCAGGCCTCTCTATCCAAGTCAACAGGAGAAGATGATGATG 4079
Query 3757 CCTGTGATCATGAATTCCCTACCCTATGCGCAGCTACTTTCAGAGGATGGTACAAGACAT 3816
|| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 4080 CCCGTGATCATGAATTCCCAACCCTATGCGCAGCTACTTTTAGAGGATGGTACAAGACAT 4139
Query 3817 TGCATGAAGAAAATCTTGCAATTCTCAACAAAATGGTGAAAACGGTTAGCTCAGAGAAAC 3876
||| |||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct 4140 TGCTTGAAGAGAATCTTGCAATTCTCAACAAACTGGTGAAGACGGTTAGCTCAGAGAAAC 4199
Query 3877 GGCAAAACTGTCAATCTGAAG-CTACTGAAGCACACTTGAAAAACATTCAGAAAACTGTA 3935
| |||||||||||| | ||| ||||||| ||||||||||||||||||||||||||||||
Sbjct 4200 GACAAAACTGTCAACC-GAAAACTACTGAGGCACACTTGAAAAACATTCAGAAAACTGTA 4258
Query 3936 AATGTGGTAGTCTCTTTAGTCAACTTGTGCCGATCTCATGAAAAGGTTACAATCCATGGC 3995
||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 4259 AATGTGGTAGTATCTTTAGTCAACTTGTGCCGATCTCATGAAAAGGTCACAATTCATGGC 4318
Query 3996 ATGGCTATCAAGTATGGTGGGAAGTATGTGGACTCATTTCTAAAAG 4041
||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 4319 ATGGCTATCAAGTATGGTGGGAAGTATGTGGACTCATTTCTTAAAG 4364
Score = 1845 bits (999), Expect = 0.0
Identities = 1168/1250 (93%), Gaps = 9/1250 (1%)
Strand=Plus/Plus
Query 1 TCTCCGTCGCAATCTCCGGAAAAATGGTGTTTCTCTCTCGCAAAAAACCTCCACCGCCAC 60
|||||||||| || | ||||||||||||||||||||||||||||| |||||| | |
Sbjct 189 TCTCCGTCGCCGTCACTGGAAAAATGGTGTTTCTCTCTCGCAAAAAGCCTCCA----C-C 243
Query 61 AGCCTCCGTCGTCGTCCTCAGCTGCTCCGTCTCTCAAAATTCCCCAGCCGCAAAAGGAAT 120
|||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 244 -GCCTCCGTCGTCATCCTCAGCTGCTCCGTCTCTCAAAATCCCCCAGCCGCAAAAGGAAT 302
Query 121 CCGTCGAGCCCGACGCGGTGGAGAATATGACTGCGATTCTAGCGGAAGTCGGATGCACAC 180
|||| |||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||
Sbjct 303 CCGTTGAGCCCGACGCGGTGGAGAAGATGACTGCCATTCTAGCCGAAGTTGGATGCACAC 362
Query 181 TGATGAATCCGTACGGTCCGCCGTGCCTTCCTTCCGATTTACACGCTTTCCGCCGCAATC 240
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct 363 TGATGAATCCGTACGGTCCGCCGTGTCTTCCTTCCGATCTACACGCTTTCCGCCGCAATC 422
Query 241 TCACTACTCGCTTATCGTCTTGCTCCGCCAATCCCGGTGAGAGAGATCACGTCGGTGCTC 300
||||| |||||||||||||| |||||||||| |||| ||||||||| ||||||||||||
Sbjct 423 TCACTGGTCGCTTATCGTCTTTCTCCGCCAATTCCGGCGAGAGAGATAACGTCGGTGCTC 482
Query 301 TTCGCTCAGTTTTCGTAGCTGGATTTTCATCGTACATTCAATCTCCGAGTAATCTTCGTA 360
|| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |
Sbjct 483 TTTGCTCAGTTTTCGTAGCTGGATTTTCATTGTATATTCAATCTCCGAGTAATCTTCGAA 542
Query 361 GAGTGCTTTCTTCTTCTTCTTCAACAACTAATAGAGACGAGAGTTTAGCTCGAAATCTCT 420
|| ||| | ||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 543 GAATGC--T-TTCTTCTTCTTCAACAACTAAGAGAGACGAGAGTTTAGTTCGAAATCTCC 599
Query 421 TGCTTGTATCTCCGATCCAACTTGATATTCAGGAAATGCTACTCGAGAAACTTCCGGAGT 480
|||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 600 TGCTTGTATCTCCGATTCAACTCGATATTCAGGAAATGCTACTCGAGAAGCTTCCGGAGT 659
Query 481 ACTTTGACGTTGTTACAGGATGTTCTTTGGAGGAGGATGTTGCTCGCCTAATCATCAATC 540
||||||| || ||||||||||||||||||||||| |||||||||||||| |||||||| |
Sbjct 660 ACTTTGATGTAGTTACAGGATGTTCTTTGGAGGAAGATGTTGCTCGCCTTATCATCAACC 719
Query 541 ATTTCCGTTGGTTAGACTTCATTGTTAATCCCAATTTGTTCACCGATAAGCTGATGCAAG 600
|||| |||||| | || ||||||||||||||| || |||||||||||||| | |||||||
Sbjct 720 ATTTTCGTTGGCTCGATTTCATTGTTAATCCCCATGTGTTCACCGATAAGTTAATGCAAG 779
Query 601 TTCTATCAATTTGTCCTCTGCACTTAAAGAAAGAAATCATTGGATCCTTGCCAGAGATTA 660
||||||| ||||||||| ||||||||||||| ||||| |||||||| |||||||||||||
Sbjct 780 TTCTATCTATTTGTCCTTTGCACTTAAAGAAGGAAATTATTGGATCGTTGCCAGAGATTA 839
Query 661 TTGGGGATCACAACTGTCAAGCTGTGGTTGATTCTTTAGAAAAGTTGCTTCAGGAGGATT 720
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 840 TTGGGGATCACAACTGTCAAGCTGTGGTTGATTCTTTAGAAAAGATGCTTCAGGAAGATT 899
Query 721 CTGCTGTTGTTGTTCCAGTGCTTGATTCTTTCTCTAACCTCAATTTAGATGATCAATTGC 780
|||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 900 CTGCTGTTGTTGTTGCAGTGCTTGATTCTTTCTCCAACCTTAATTTAGATGATCAATTGC 959
Query 781 AAGAACAGGCGATTACAGTAGCAATATCATGTATTAGAACAATAGACGCAGAGCACATGC 840
|||||||||||||||||||||| |||||||||||||||||||| |||| |||||| ||||
Sbjct 960 AAGAACAGGCGATTACAGTAGCGATATCATGTATTAGAACAATCGACGGAGAGCATATGC 1019
Query 841 CGTATCTACTTAGGTTTTTGCTTCTTGCTGCTACTCCAGCAAATGTTAGAAGAATCATCT 900
||||||||||||||||||||||||||||||| ||||| | |||||||||||| || ||||
Sbjct 1020 CGTATCTACTTAGGTTTTTGCTTCTTGCTGCAACTCCTGTAAATGTTAGAAGGATAATCT 1079
Query 901 CCCAGATACGCGAACAGTTGAAATTCACCGGAATGTCACAACCTTGTGCTTCTCAAAATA 960
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 CCCAGATAAGGGAACAGTTGAAATTCACCGGAATGTCACAACCTTGTGCTTCTCAAAATA 1139
Query 961 AACTCAAAGAAAAAATACCTGCATGTAATGCAGAAGGTTCTATTCTCCATGCTTTAAGAT 1020
||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1140 AACTCAAAGGAAAAGTACCTGCATATAATGCAGAAGGTTCTATTCTCCATGCTTTAAGAT 1199
Query 1021 CAAGCCTTCGATTTAAGAATATACTCTGTCAAGAAATCATAAAGGAGCTGAATAGTCTGG 1080
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1200 CAAGCCTTCGATTTAAGAATATACTCTGTCAAGAAATTATAAAGGAGCTGAATAGTCTGG 1259
Query 1081 AGAAACCTCGGGATTTCAAGGTAATCGATGTATGGCTGCTTATTCTCATGTACATGAACG 1140
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1260 AGAAACCTCGAGATTTCAAGGTAATCGATGTATGGCTGCTTATTCTCATGTACATGAATG 1319
Query 1141 GGGATCCTATCCGGAAGAGCATCGAGAAGATATTTAAGAAGAAAGTGGTTGATGAATGCA 1200
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1320 GGGATCCTGTCCGGAAGAGCATCGAGAAGATATTTAAGAAGAAAGTGGTTGATGAATGCA 1379
Query 1201 TACAAGAAGCCTTGCTTGATCAATGTATAGGTGGTAATAAAGAGTTTGTG 1250
||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1380 TACAAGAGGCCTTGCTTGATCAATGTATAGGTGGTAATAAAGAGTTTGTG 1429
Score = 231 bits (125), Expect = 3e-59
Identities = 135/140 (96%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 4041 GGTAGCTTGAAACACAAGGACTTGAGAGGGCAAATAGTGAGTTCTCAGGCTTATGTAGAT 4100
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 4541 GGTAGCTTGAAACACAAGGACTTGAGAGGGCAAATAGTGAGTTCTCAGGCTTATATAGAT 4600
Query 4101 AACGAAGCAGATGAGGTTGAAGAAACCATGTCCGGAGAAGAAGAACCCATGCAAGAGGAT 4160
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 4601 AACGAAGCCGATGAGGTTGAAGAAACCATGTCCGGAGAAGAAGAGCCCATGCAAGAGGAT 4660
Query 4161 GAAATTCCCTTGACACCTTA 4180
||| |||| |||||||||||
Sbjct 4661 GAACTTCCATTGACACCTTA 4680
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 209396820082
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5