BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg946882

Length=256
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G11650.1 | Symbols:  | alpha/beta-Hydrolases superfamily pro...   161    2e-39


> AT5G11650.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein 
| chr5:3744980-3747125 FORWARD LENGTH=1571
Length=1571

 Score =  161 bits (87),  Expect = 2e-39
 Identities = 98/103 (95%), Gaps = 1/103 (1%)
 Strand=Plus/Plus

Query  19   TTGAGATGGCCGGAGATGGAGAGATCTCTTGTTCATTGTTTTATGGCCGTCGTGGTAACG  78
            |||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||
Sbjct  367  TTGAGATGGCCGGAGATGGAGAGATCTCTTGTTCGTTGTTTTACGGACGTCGTGGTAACG  426

Query  79   CTTTATTCTCTCGGTCGTGGTTGCCTATT-CCAGCGAACTTAG  120
            ||||||||||||||||||||||||||||| || ||||||||||
Sbjct  427  CTTTATTCTCTCGGTCGTGGTTGCCTATTTCCGGCGAACTTAG  469



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 11662117768


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5