BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg946922
Length=2338
Score E
Sequences producing significant alignments: (Bits) Value
AT4G14570.1 | Symbols: | acylaminoacyl-peptidase-related | chr... 3611 0.0
> AT4G14570.1 | Symbols: | acylaminoacyl-peptidase-related | chr4:8362184-8366653
FORWARD LENGTH=2529
Length=2529
Score = 3611 bits (1955), Expect = 0.0
Identities = 2202/2322 (95%), Gaps = 13/2322 (1%)
Strand=Plus/Plus
Query 1 TTGGATTCGGAGATTTGTAGCTATGGATTCTTGTGGAACTGATTCGGCTAAAGAAGTGCA 60
||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct 85 TTGGATTCGAAGATTTGTAGCTATGGATTCTTCTGGAACTGATTCGGCTAAAGAATTGCA 144
Query 61 TGTTGGTTTGGACTCAACTACTGAGGAAGAGTATGCCACACAGTCAAAGTTACTTAAAGA 120
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 145 TGTTGGTTTGGACCCAACTACAGAGGAAGAGTATGCCACACAGTCAAAGTTACTTCAAGA 204
Query 121 GTTCATTAATATTCCCAGTATTGACAAAGCTTGGATTTTTAACTCTGGTTCTGGTTCTCA 180
|||||||||||||||||| ||||| ||||||||||||||||| |||| ||||||||||||
Sbjct 205 GTTCATTAATATTCCCAGCATTGATAAAGCTTGGATTTTTAATTCTGATTCTGGTTCTCA 264
Query 181 GGCAATGTTTGCCATGAGTCAAGCAAACCTTTTGGCTAATAAAAGGAAGAAGTTTATGTT 240
||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 265 GGCAATGTTTGCCTTGAGTCAAGCAAACCTTTTGGCTAATAAAAAGAAGAAGTTTATGTT 324
Query 241 GTCGGGTCATATCTCGAAAGAAAGTAACCAATCTGTAAACTTTCACTGGGCGCCATTTCC 300
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 325 GTCGGGTCATATTTCGAACGAAAGTAACCAATCTGTAAACTTTCACTGGGCGCCATTTCC 384
Query 301 CATCGAGATGACTGGTGCATCGGCTTTTATCCCATCTCCATCGGG-TCTGAAGCTCCTTG 359
|||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||
Sbjct 385 CATCGAGATGACTGGTGCATCGGCTTTTGTCCCATCTCCATCGGGAT-TGAAGCTCCTTG 443
Query 360 TAATTCGAAATCCTGAAAATGAATCTCCTACAAAGTTTGAGATATGGAATTCGTCTCATC 419
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 444 TAATTCGAAATCCTGAAAATGAATCTCCTACAAAGTTTGAGATATGGAATTCTTCTCAGC 503
Query 420 TAGAAAAGGAGTTCCATATTCCACAGAAAGTTCATGGCTCTGTATATGTTGATGGATGGT 479
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 504 TAGAGAAGGAGTTCCATATTCCACAGAAAGTTCATGGCTCTGTATACGTTGATGGATGGT 563
Query 480 TTGAAGGGATATCTTGGAATTCAGATGAGACTCGTGTTGCATATGTCGCCGAGGAGCCAT 539
|||||||||| |||||| ||||||||||||||| |||||| |||||||||||||||||||
Sbjct 564 TTGAAGGGATCTCTTGGGATTCAGATGAGACTCATGTTGCGTATGTCGCCGAGGAGCCAT 623
Query 540 CTCGTCCGAAGCCTACATTTGACCATCTAGGTTATTACAAGAAAGGAAATTCTTTGGAAA 599
||||||| |||||||||||||| ||||| |||||||||||||||| |||||||||||| |
Sbjct 624 CTCGTCCCAAGCCTACATTTGATCATCTTGGTTATTACAAGAAAGAAAATTCTTTGGACA 683
Query 600 AGGATATTGGAAGCTGGAAAGGTGAAGGAGATTGGGAAGAGGAATGGGGAGAAGCATATG 659
||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 684 AGGGTATTGGAAGCTGGAAAGGTGAAGGGGATTGGGAAGAGGAATGGGGAGAAGCATACG 743
Query 660 CCGGAAAAAGGCAGCCTGCACTGTTTGTTATCGATGTTGACAGTGGAGAGGTCGAGCTAA 719
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct 744 CCGGAAAAAGGCAGCCTGCACTGTTTGTTATCAATGTTGACAGTGGAGAGGTCGAGCCAA 803
Query 720 TCAAAGGAATTCCTAGATCAATAAGTGTTGGACAGGTTGTTTGGAGTCCAAACAGTAACG 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 804 TCAAAGGAATTCCTAGATCAATAAGTGTTGGACAGGTTGTTTGGAGTCCAAACAGTAATG 863
Query 780 GATCAGCTCAATATTTGGTTTTTGCCGGGTGGTTAGGAGATAAAAGAAAGTTTGGGATTA 839
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 864 GATCAGCTCAATATTTGGTTTTTGCCGGTTGGTTAGGAGATAAAAGAAAGTTTGGTATTA 923
Query 840 AGTACTGCTACAACAGACCTTGTGCCATATATGCAATTAAGTTCATATCGGATGAGCCAA 899
||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||| ||||
Sbjct 924 AGTACTGCTACAACAGACCATGTGCCATATACGCAATTAAGTTCACATCGGATGAACCAA 983
Query 900 AAGATGAT---GCAAATGAATTCCCTATTCATAATTTGACTAAGAGCATAAGCAGCGGTT 956
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 984 AAGATGATGACGCAAATGAATTCCCTATTCATAATTTGACTAAGAGCATAAGCAGCGGGT 1043
Query 957 TTTGTCCTCGGTTCAGCAAAGATGGAAAATTTCTTGTGTTTGTATCCGCAAAGAGCGCTG 1016
||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 1044 TTTGTCCTCGGTTCAGCAAAGATGGCAAATTTCTTGTGTTTGTATCCGCAAAGACCGCTG 1103
Query 1017 TTGATTCTGGGGCGCATTGGGCAACCGAGTCACTTCACAGGATTGACTGGCCAAGTGACG 1076
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 1104 TTGATTCTGGGGCGCATTGGGCAACCGAGTCACTTCATAGGATTGACTGGCCAAGTGATG 1163
Query 1077 GGAAACTTCCTGAATCAACAAATATTGTTGACGTGATTCAAGTTGTGAATTGTCCTGACG 1136
||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| | |
Sbjct 1164 GGAAACTTCCTGAGTCAACAAATATCGTTGATGTGATTCAAGTTGTGAATTGTCCTAAGG 1223
Query 1137 ACGGTTGTTTCCCTGGGCTCTATGTTACCGGCCTTCTGTGTGATCCGTGGCTGTCAGATG 1196
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct 1224 ACGGTTGTTTCCCTGGGCTCTATGTTACCGGCCTTCTGAGTGATCCATGGCTGTCAGATG 1283
Query 1197 GACATAGCCTTATCTTGTCTACCTACTGGCGCAGTTGTCGAGTTATACTCAGCGTAAATT 1256
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1284 GACATAGCCTTATGTTGTCTACCTACTGGCGCAGTTGTCGAGTTATACTCAGCGTAAATT 1343
Query 1257 TGCTAAGCGGTGAAGTGTCACGTGCCAGCCCTAGTGATTCAGATGATTCGTGGA-CTGCT 1315
|||||||||||||||||||||||||||||||||||||||||||| |||| |||| | |||
Sbjct 1344 TGCTAAGCGGTGAAGTGTCACGTGCCAGCCCTAGTGATTCAGATTATTCATGGAAC-GCT 1402
Query 1316 TTTGCGCTAGATGGTGATAATATTGTTGCCGTGTCTAGCAGTCCGGTGAGTGTTCCTGAA 1375
|||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||
Sbjct 1403 CTTGCGCTAGATGGTGATAGTATTGTTGCTGTGTCTAGCAGCCCGGTGAGTGTTCCTGAA 1462
Query 1376 ATTAAGTATGGAAAGAAAGTTCTCGATTCAGTTGGGAAGCCTTCATGGCAGTGGTCGAAT 1435
||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct 1463 ATTAAGTATGGAAAGAAAGGTCTCGATTCAGCTGGGAAGCCTTCATGGCTCTGGTCGAAT 1522
Query 1436 ATCCAAAACCCGATCAGATGTTCTGAGAAGGTTATGTCAGGGCTTTCATCTCTTCAGTTT 1495
||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 1523 ATCCAAAGCCCGATCAGATACTCTGAGAAGGTTATGGCAGGGCTTTCATCTCTTCAGTTT 1582
Query 1496 AAATTTCTAAAAGTACCGATTATTGATGTTTCTGAAGGTCTTGCCGAAGGGGCCAAAAAA 1555
||| ||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||
Sbjct 1583 AAAATTCTAAAAGTACCAATTAGTGATGTTTCTGAAGGTCTTGCCGAAGGAGCCAAAAAT 1642
Query 1556 CCTATTGAAGCTATATATGTATCGTCCTCCAAGTCTAAGGAGAATGGGAAATGTGATCCG 1615
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1643 CCTATTGAAGCAATATATGTATCGTCATCCAAGTCTAAGGAGAATGGGAAATGTGATCCC 1702
Query 1616 TTAATTGCGGTCCTTCATGGAGGTCCTCATTCTGTTTCACCATGCAGCTTCTCCAGGAAT 1675
|||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1703 TTAATTGCTGTTCTTCATGGAGGTCCTCATTCTGTTTCACCATGCAGCTTCTCCAGGACT 1762
Query 1676 ATGGCCTATCTCTCCTCAATTGGATACAGTCAGCTGATTGTAAATTACAGGGGTTCATTG 1735
|||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct 1763 ATGGCCTATCTCTCCTCAATTGGATATAGTCAGCTGATTATAAATTACAGGGGTTCATTA 1822
Query 1736 GGATATGGAGAAGATGCTTTGCAGTCTCTACCTGGCAAAGTTGGATCGCAGGACGTGAAA 1795
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1823 GGATATGGGGAAGATGCTTTGCAGTCTCTACCTGGCAAAGTTGGATCGCAGGACGTGAAA 1882
Query 1796 GAT-GTGCTCGCGGCTGTCGA-CTATGCCATTGAAATGGGACTTGCAGACCCATCTAAAA 1853
||| || ||| |||||| || | ||||||||||||||||| |||||||||| |||| ||
Sbjct 1883 GATTGT-CTCTTGGCTGTAGATC-ATGCCATTGAAATGGGAATTGCAGACCCGTCTAGAA 1940
Query 1854 TAACCGTGTTAGGTGGTTCTCATGGTGGGTTTTTGACCACTCACTTGATTGGCCAGGCGC 1913
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct 1941 TAACCGTGCTAGGTGGTTCTCATGGTGGGTTTCTGACCACTCACTTGATTGGCCAGGCCC 2000
Query 1914 CGAATAAATTTGTGGCAGCAGCTGCTAGGAATCCCGTATGCAACATAGCATCAATGGTTG 1973
|| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 2001 CGGATAAATTTGTGGCAGCAGCTGCAAGGAATCCCGTATGCAACATGGCATCAATGGTTG 2060
Query 1974 GGATTACAGATATACCTGATTGGTGTTTCTTTGAAGCCTATGGAGACCAGACTCACTATA 2033
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct 2061 GGATTACAGATATACCTGATTGGTGTTTCTTTGAAGCCTATGGGGACCAGAGTCACTATA 2120
Query 2034 CAGAAGCCCCCTCACCCGAAGATCTTTCTCGGTTTCATCAAATATCTCCTATATCACACA 2093
|||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 2121 CAGAAGCCCCCTCAGCCGAAGATCTCTCTCGGTTTCATCAAATGTCTCCTATATCACACA 2180
Query 2094 TATCAAAGGTGAAAACACCCACTTTGTTTCTTTTGGGATCTCAGGACCTCCGTGTTCCCA 2153
| ||||||||||||||||| |||||||||||||||||| || |||| |||||||||||||
Sbjct 2181 TCTCAAAGGTGAAAACACCTACTTTGTTTCTTTTGGGAACTAAGGATCTCCGTGTTCCCA 2240
Query 2154 TATCAAACGGATTTCAATATGTGAGGGCGTTGAAGGAGAAAGGAGTTGAGGTTAAAGTTC 2213
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2241 TATCAAACGGATTTCAATACGTGAGGGCGTTGAAGGAGAAAGGAGTTGAGGTTAAAGTTC 2300
Query 2214 TTGCT-TTTCCCAATGACAATCATCCCCTAGACAGACCACAGACGGATTATGAAAGCTTT 2272
||| | ||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct 2301 TTG-TATTTCCCAATGACAATCATCCCTTAGATAGACCACAGACGGATTATGAAAGCTTT 2359
Query 2273 CTCAACATTGCTGTCTGGTTCAACAAGTACTGCAAGCTGTGA 2314
||||||||||||||||||||||||||||||||||||||||||
Sbjct 2360 CTCAACATTGCTGTCTGGTTCAACAAGTACTGCAAGCTGTGA 2401
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 116063660040
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5