BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg946947 Length=942 Score E Sequences producing significant alignments: (Bits) Value AT4G14390.1 | Symbols: | Ankyrin repeat family protein | chr4:... 966 0.0 AT4G14400.1 | Symbols: ACD6 | ankyrin repeat family protein | c... 715 0.0 AT4G05040.1 | Symbols: | ankyrin repeat family protein | chr4:... 689 0.0 > AT4G14390.1 | Symbols: | Ankyrin repeat family protein | chr4:8289644-8292083 FORWARD LENGTH=2085 Length=2085 Score = 966 bits (523), Expect = 0.0 Identities = 743/848 (88%), Gaps = 20/848 (2%) Strand=Plus/Plus Query 44 GAGCTAGATAGAATTGAGGCACAAAGGTCAACGGATGCGTCTCATGATCAACGGAA-AGG 102 |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| | | Sbjct 76 GAGCTAGATAGAATTGAGGCACAAAGGTCAACAGATGCGTCTCATGATCAACAGAACA-G 134 Query 103 AACATACTTACCCATGAACATACATGGTTCACAAGATTTCTCTCAAAGCGGAGGAGATGG 162 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 135 AACATACTTACCCATGAACATACACGGTTCACAAGACTTCTCTCAAAGCGGAGGAGATGG 194 Query 163 CGCCACGTCACCTACGGGAGACACCGAATCTATGCCAGAGTTCCTAACTAACCTCAGATT 222 || |||| ||| ||| ||||||||||||||| ||||||||||||| |||||||| ||||| Sbjct 195 CGTCACGCCACTTACAGGAGACACCGAATCTGTGCCAGAGTTCCTTACTAACCTTAGATT 254 Query 223 GTCGGATCTTTTCGCTATTCGTGGTAAAGATTTCCCGATGCCTCCATG-GATTTTTAGTA 281 ||||||||||| |||||| |||||| ||||| ||| |||| |||| | | ||||||||| Sbjct 255 GTCGGATCTTTACGCTATCCGTGGTGAAGATGTCCGGATGATTCCA-GAGGTTTTTAGTA 313 Query 282 AAATAAGTGATGGGAACAAACAATGTCTGGAGAAGTTGAAAAGCCACAGAAATTT-AATG 340 |||||||||||||||||||| |||||||||||||||||| ||||| | ||||| | || Sbjct 314 AAATAAGTGATGGGAACAAAGAATGTCTGGAGAAGTTGAGAAGCC-GTGGAATTTCAGTG 372 Query 341 GCACGTCTCAAGAGCAATACAGGAGATTCAATTCTTCATCTTGCTGCTAGATGGGGTCAT 400 |||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct 373 GCACGTATCAAGAGCAATACAGGAGATTCAATTCTTCATCTTGCTGTTACATGGGGTCAT 432 Query 401 CTAGAACTAGTGAAGAACATTGCCTGTGAATGTCCGTGCCTTCTATTGGAGCCAAACTCG 460 ||||||||||||||| | |||| ||||||||| ||| | ||||| ||||||| |||||| Sbjct 433 CTAGAACTAGTGAAGGAGATTGTCTGTGAATGCCCGCGTCTTCTCTTGGAGCAAAACTCA 492 Query 461 AGCGGTCAGACACCGCTTCATGTGGCGGCTCATGGCGGTCATACCGCTATTGTTGAGGCT 520 ||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||| Sbjct 493 AGCGGTCAGACACCGCTACATGTGGCGGCTCATAGCGGTCATACCACTATTGTTGAGGCT 552 Query 521 TTTGTTGCATTGGTAACATTTGCCTCATCTAGATTGTGTAATGAAGAGAGTGAGAGAGTG 580 ||||| ||||||||||||||| | ||| ||||| ||||||||||||||||||||||| || Sbjct 553 TTTGTCGCATTGGTAACATTTTCTTCAGCTAGACTGTGTAATGAAGAGAGTGAGAGAATG 612 Query 581 AATCCATATGTTCTCAAGGACGAGGATGGAAATACTGCTCTGCACTTGGCCATTAAAGGA 640 || |||||||||||||||||| | |||||||||||||||||| ||| || ||| |||| Sbjct 613 AACCCATATGTTCTCAAGGACAAAGATGGAAATACTGCTCTGTACTACGCGATTGAAGGG 672 Query 641 CTCTATTTGGAGATCGCTAG-ATGTCTGGTGAACGCGAACCAGGATGCTCCTTTTCTTGG 699 | |||||| ||||| ||| | ||||||||||||||| ||||||||||||||||||||||| Sbjct 673 CGCTATTTCGAGATGGCT-GTATGTCTGGTGAACGCAAACCAGGATGCTCCTTTTCTTGG 731 Query 700 AAATAACAAGGGAATATCTTCCTTGTATATGGCAGTAGA-AGCTAGA-ATGGTAACCCTT 757 |||||| | ||| |||||||||||| | ||||| || | | || || ||| || | ||| Sbjct 732 AAATAAGTATGGAGTATCTTCCTTGTTTGTGGCAATAAATA-CTGGAGATG-TATCTCTT 789 Query 758 GTGGAAGCAATTTTGAAAACTAA-AGACGATGACGATGAGGACCTTGAAGGGAAGAAGTC 816 ||| ||||||||||||||| | | || | | || | |||||||| ||||||||||||| Sbjct 790 GTGAAAGCAATTTTGAAAA-TCATAGGC-A--AC-A--AGGACCTTAAAGGGAAGAAGTC 842 Query 817 TAACTTAGAGTCGAAGATACAAGGGTACAAATTTCTTGTACATGTTGCTTTGCAGGCCAA 876 |||||| ||||| ||| |||||||| | |||| ||||| ||||||||||||| | || | Sbjct 843 TAACTTGGAGTCAAAGTTACAAGGGCAGAAATCTCTTGCACATGTTGCTTTGGTGACCCA 902 Query 877 GAGTATAG 884 |||||||| Sbjct 903 GAGTATAG 910 > AT4G14400.1 | Symbols: ACD6 | ankyrin repeat family protein | chr4:8294446-8298602 FORWARD LENGTH=2354 Length=2354 Score = 715 bits (387), Expect = 0.0 Identities = 643/765 (84%), Gaps = 23/765 (3%) Strand=Plus/Plus Query 135 AAGATTTCTCTCAAAGCGGAGGAGATGGCGCCACGTCACCTACGGGAGACACCGAATCTA 194 ||||||||||||| |||||||||| |||| |||||||||||||||| ||||||||| || Sbjct 173 AAGATTTCTCTCACAGCGGAGGAGTTGGCACCACGTCACCTACGGGCGACACCGAACCTG 232 Query 195 TGCCAGAGTTCC-TAACTAACCTCAGATTGTCGGATCTTTTCGCTATTCGTGGTAAAGAT 253 ||||| |||||| | |||||||| | ||||||||||||||||||| | | |||| ||||| Sbjct 233 TGCCAAAGTTCCGT-ACTAACCTTAAATTGTCGGATCTTTTCGCTCTCCCTGGTGAAGAT 291 Query 254 TTCCCGATGCCTCCATG-GATTTTTAGTAAAATAAGTGAT-GGGAACAAACAATGTCTGG 311 || |||| |||| | ||||||| || ||| ||| || ||||| ||| ||||||||| Sbjct 292 GTCGAGATGACTCC-GGAGATTTTTGGTGGAATGAGTAATGGGGAA-AAAGAATGTCTGG 349 Query 312 AGAAGTTGAAAAGCCACAGAAATTTAATGGCACGTCTCAAGAGCAATACAGGAGATTCAA 371 ||||||||| |||| | ||| ||||| |||| |||||||||||||||||||||||| Sbjct 350 AGAAGTTGAGAAGCAATGGAACGCCAATGGAACGTGTCAAGAGCAATACAGGAGATTCAA 409 Query 372 TTCTTCATCTTGCTGCTAGATGGGGTCATCTAGAACTAGTGAAGAACATTGCCTGTGAAT 431 |||||||| ||||||||| |||||||||||| |||||||||||| | ||| || ||||| Sbjct 410 TTCTTCATATTGCTGCTAAATGGGGTCATCTGGAACTAGTGAAGGAGATTATCTTTGAAT 469 Query 432 GTCCGTGCCTTCTATTGGAGCCAAACTCGAGCGGTCAGACACCGCTTCATGTGGCGGCTC 491 |||| ||||||||||| |||| |||||| ||| ||||||||||||| |||||||| ||| Sbjct 470 GTCCATGCCTTCTATTCGAGCAAAACTCAAGCCGTCAGACACCGCTACATGTGGCTACTC 529 Query 492 ATGGCGGTCATACCGCTA-TTGTTGAGGCTTTTGTTGCATTGGTAACATTTGCCTCATCT 550 |||||||||||||| | ||||||||||| ||||||||| |||||||| ||| | | || Sbjct 530 ATGGCGGTCATACC-AAAGTTGTTGAGGCTCTTGTTGCATCGGTAACATCTGCTTTAGCT 588 Query 551 AGAT-TGTGTAATGAAGAGAGTGAGAGAGTGAATCCATATGTTCTCAAGGACGAGGATGG 609 || | || ||| ||||||||||||| || |||||||| ||||||| |||||||| ||||| Sbjct 589 AG-TCTGAGTACTGAAGAGAGTGAGGGACTGAATCCACATGTTCTTAAGGACGAAGATGG 647 Query 610 AAATACTGCTCTGCACTTGGCCATTAAAGGACTCTATTTGGAGATCGCTAGATGTCTGGT 669 ||||||||||||| ||| |||||| |||||| |||||||||||| |||| |||||||| Sbjct 648 AAATACTGCTCTGTACTACGCCATTGAAGGACGCTATTTGGAGATGGCTACCTGTCTGGT 707 Query 670 GAACGCGAACCAGGATGCTCCTTTTCTTGGAAATAACAAGGGAATATCTTCCTTGTAT-A 728 ||||||| || |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 708 GAACGCGGACAAGGATGCTCCTTTTCTTGGAAATAACAAGGGAATATCTTCCTTGTACGA 767 Query 729 TGGCAGTAGAAGCTAGAA-TGG-T---AAC-CCTTGTGGAAGCAATTTTGAAAACTAAAG 782 | | ||||| ||| ||| | | || ||||||| |||||||||||||||| | || Sbjct 768 AGCC-GTAGACGCTGGAAATAAATTTGAAGACCTTGTGAAAGCAATTTTGAAAACCACAG 826 Query 783 ACGATGACGATGAGGACCTTGAAGGGAAGAAGTCTAACTTAGAGTCGAAGAT-ACAAGGG 841 |||| ||| || | ||| ||||| || ||||| ||||||||| ||||| || ||||||| Sbjct 827 ACGACAACG-TG-G-ACCGTGAAGTGAGGAAGTTTAACTTAGATTCGAA-ATTACAAGGG 882 Query 842 TACAAATTTCTTGTACATGTTGCTTTGCAGGCCAAGAGTATAGGT 886 ||||| ||||| ||||||||||||| ||||||| ||||||||| Sbjct 883 AACAAACATCTTGCACATGTTGCTTTGAAGGCCAAAAGTATAGGT 927 Score = 111 bits (60), Expect = 9e-24 Identities = 77/85 (91%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 18 GGTTTGCGATGGACAGTTCTGAAGCAGAGCTAGATAGAATTGAGGCACAAAGGTCAACGG 77 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| | Sbjct 92 GGTTTGCGATGGACAGTTCTGGAGCAGATCTAGATAGAATTGAGGCACAAAGGTCAATGT 151 Query 78 -ATGCGTCTCATGATCAACGGAAAG 101 | | ||||||||||||||||||| Sbjct 152 TA-GTTTCTCATGATCAACGGAAAG 175 > AT4G05040.1 | Symbols: | ankyrin repeat family protein | chr4:2578689-2581798 FORWARD LENGTH=2375 Length=2375 Score = 689 bits (373), Expect = 0.0 Identities = 740/911 (81%), Gaps = 50/911 (5%) Strand=Plus/Plus Query 1 TTTGTGTGATGATTTTAGGTTTGCGATGGACAGTTCTGAAGCAGAGCTAGATAGAATTGA 60 ||||||||||||||||||| ||| ||||||||||||||||||| | |||||||||||||| Sbjct 608 TTTGTGTGATGATTTTAGGATTGTGATGGACAGTTCTGAAGCACATCTAGATAGAATTGA 667 Query 61 GGCACAAAGGTCAACGGATGCGTCTCATGATCAACGGAAAGGAACATACTTACCC-ATGA 119 |||||| ||||||||||||| ||||||||| |||| |||| || |||||| ||| |||| Sbjct 668 GGCACAGAGGTCAACGGATGTGTCTCATGACCAACAGAAAAAAAGATACTT-CCCAATGA 726 Query 120 A-C--AT--ACATGGTTCACAAG--ATTTCT-CTCAAAGCGGAGGAGATGGCGCCACGTC 171 | | || ||| | || |||| | ||| || | | |||||||||||||||||| | Sbjct 727 ATCTGATAAACAAAG-TCGCAAGCAAACTCTGTTC-ACGAGGAGGAGATGGCGCCACGCC 784 Query 172 ACCTACGGGAGACACCGAATCTATGCCAGAGTTCCT-AACTAACCTCAGATTGTCGGATC 230 ||||| |||||||| |||||| || ||||||||| ||| ||||||| ||| ||||||| Sbjct 785 ACCTATGGGAGACAATGAATCTGGGCTAGAGTTCCTCAAC-AACCTCAAATTATCGGATC 843 Query 231 TTTTCGCTAT-T--CGTGGT-AAAGATTTCCCGATGCCTCCATGG-A-TTTTTAGTAAAA 284 ||||| | || | || ||| ||| || ||| |||| | | || | ||||||| | Sbjct 844 TTTTC-C-ATCTCCCG-GGTGAAA-ATGTCCAGATGAAT--ACGGAAGTTTTTAGCGGAC 897 Query 285 TAAGTGATGGGAACAAACAATGTCTGGAGAAGTTGAAAAGCCACAGAAATTTAATGGCAC 344 | ||||||||| ||||| | |||||||||| ||||||| || ||| ||||||| Sbjct 898 TGAGTGATGGGGACAAAGAGTGTCTGGAGATGTTGAAAGGCGTTGGAACGCCAATGGCAT 957 Query 345 GTCTCAAGAGCAATACAGGAGATTCAATTCTTCATCTTGCTGCTAGATGGGGTCATCTAG 404 ||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct 958 GTCTCAAGAGCGATAGAGGAGATTCAGTTCTTCATCTTGCTGCTAGATGGGGTCATCTAG 1017 Query 405 AACTAGTGAAGAACATTGCCTGTGAATGTCCGTGCCTTCTATTGGAGCCAAACT-CGAGC 463 ||||||||||||||||| || |||||| || |||||| |||||||| ||||| | || Sbjct 1018 AACTAGTGAAGAACATTATCTCTGAATGCCCATGCCTTGTATTGGAGTTAAACTTCAAG- 1076 Query 464 GGTCAGACA-CCGCTTCATGTGGCGGCTCATGGCGGTCATACCGCTATTGTTGAGGCTTT 522 | |||| | |||||||||||||| ||||||| ||||||| | ||||||||||||||| | Sbjct 1077 GATCAG-CTTCCGCTTCATGTGGCAGCTCATGCCGGTCATTCGGCTATTGTTGAGGCTCT 1135 Query 523 TGTTGCATTGGTAACATTTGCCTCATCTAGATTG--TGTAATGAAGAGAGTGAGAGAGTG 580 |||||| | |||||||||| ||| |||| || || || ||||| || |||||| | Sbjct 1136 TGTTGCGTCGGTAACATTTTTTTCAGATAGACTGGCTG-AA-GAAGATAGAGAGAGACTA 1193 Query 581 AATCCATATGTTCTCA-AGGACGAGGATGGAAATACTGCTCTGCACTTGGCCATTAAAGG 639 |||||||||||||||| || || | ||||||||||||||||||||||||||||| |||| Sbjct 1194 AATCCATATGTTCTCAGAG-ACAAATATGGAAATACTGCTCTGCACTTGGCCATTGAAGG 1252 Query 640 ACTCTATTTGGAGATCGCTAGA-TGTCTGGTGAACGCGAACCAGGATGCTCCTTTTCTTG 698 || |||| ||||||| ||| | | ||||||||||| ||||||| ||||| ||||||||| Sbjct 1253 ACGCTATATGGAGATGGCT-GCCTCTCTGGTGAACGAGAACCAGAATGCTTCTTTTCTTG 1311 Query 699 GAAATAACAAGGGAATATCTTCCTTGTATATGGCAGTAGAAGCTAGA-ATGGTAACCCTT 757 |||||| ||||||||||||||||||| ||||||||||||||| || ||| | || ||| Sbjct 1312 AAAATAATGAGGGAATATCTTCCTTGTACATGGCAGTAGAAGCTGGAGATG-TGACTCTT 1370 Query 758 GTGGAAGCAATTTTGAAAACTAAAGACGATGACGATGAGGACCTTGAAGGGAAGAAGTCT 817 ||| ||| |||||||||||| || | | || |||| ||||||||||| ||| ||| Sbjct 1371 GTGAAAGAAATTTTGAAAACCGCAG--G-TAACAATGA---CCTTGAAGGGAGGAACTCT 1424 Query 818 AACTTAGAGTCGAAGATACAAGGGTACAAATT-TCTTGTACATGTTGCTTTGCAGGCCAA 876 |||||||| || ||| | ||||| | ||| ||||||||||||||||||| | |||| Sbjct 1425 AACTTAGATTCAAAGTTGGAAGGG-AGAAAACATCTTGTACATGTTGCTTTGAATGCCA- 1482 Query 877 GA-GTATAGGT 886 || |||||||| Sbjct 1483 GAAGTATAGGT 1493 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 46064712799 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5