BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg946955
Length=1696
Score E
Sequences producing significant alignments: (Bits) Value
AT4G14350.1 | Symbols: | AGC (cAMP-dependent, cGMP-dependent a... 2756 0.0
AT3G23310.1 | Symbols: | AGC (cAMP-dependent, cGMP-dependent a... 1838 0.0
AT5G09890.2 | Symbols: | Protein kinase family protein | chr5:... 161 2e-38
> AT4G14350.1 | Symbols: | AGC (cAMP-dependent, cGMP-dependent
and protein kinase C) kinase family protein | chr4:8256086-8260787
REVERSE LENGTH=2327
Length=2327
Score = 2756 bits (1492), Expect = 0.0
Identities = 1633/1701 (96%), Gaps = 9/1701 (1%)
Strand=Plus/Plus
Query 3 AAGCTAAAGGGGAGAGAAATGGAGACTGCCAAAGCTTGGCTGAATAAGTTAAAATCTAAA 62
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 291 AAGCTAAAGGGGAGAGAAATGGAGACTGCCAAAGCTTGGCTGAGTAAGTTAAAATCTAAA 350
Query 63 GACAAGGTGAAATCTTCGAAAAAGAAGGAAACTACAAGTAATGTAAAGGAAGGACCGAAA 122
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct 351 GACAAGGTGAAATCTTCGAAAAAGAAGGAAGCCACAAGTAATGTAAAGGAAGGACCGAAA 410
Query 123 ACAGCTGGAGGTGAAGAAGCACTTTCAAATATAACTAAGGAGAAGGCTGCTGCTGCTAAA 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 411 ACAGCTGGAGGTGAAGAAGCACTTTCAAATATAACTAAGGAGAAGGCTGCTGCTGCAAAA 470
Query 183 CTATATATTGAAAATCATTACAAAATGCAAATGCAGAGTCTGCAGGAAAGAAAAGAGCGA 242
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 471 CTGTATATTGAAAACCATTACAAAATGCAAATGCAGAGTCTGCAGGAAAGAAAGGAGCGA 530
Query 243 CGCAAAATGCTAGaaaaaaaaTTAGCTGCTGCAGAAGTCTCTGAGGAAGAGCAGAACAAC 302
|||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||
Sbjct 531 CGCAAAATGCTAGAGAAAAAATTAGCTGCTGCAGAAGTCTCTGAGGAAGAGCAAAATAAC 590
Query 303 TTGCTAAAGGATTTGGAGATGAAGGAAACTGAATACATGCGCCGTCAGAGACATAAAATG 362
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 591 TTGCTAAAGGATTTGGAGATGAAGGAAACTGAATATATGCGCCGTCAGAGGCATAAAATG 650
Query 363 GGAGCTGATGACTTCGAGCCATTGACAATGATTGGGAAGGGTGCATTCGGGGAGGTTAGG 422
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 651 GGAGCTGATGACTTTGAGCCATTGACAATGATTGGGAAGGGTGCATTCGGAGAGGTTAGG 710
Query 423 ATATGTAGGGAGAAGGGAACAGGCAATGTCTATGCAATGAAGAAGCTTAAGAAATCTGAG 482
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 711 ATCTGTAGGGAGAAGGGAACAGGCAATGTCTATGCAATGAAGAAGCTTAAGAAATCTGAG 770
Query 483 ATGCTTCGCAGAGGCCAGGTGGAACATGTAAAAGCAGAGAGAAATTTACTTGCAGAAGTT 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 771 ATGCTTCGCAGAGGCCAGGTGGAACATGTAAAAGCAGAGAGAAATTTACTTGCAGAAGTT 830
Query 543 GACAGCAATTGTATTGTCAAACTGTATTGTTCTTTCCAAGATGAGGAGTATTTGTATCTC 602
|| |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 831 GATAGCAATTGCATTGTCAAACTGTATTGTTCTTTCCAAGATGAAGAGTACTTGTATCTC 890
Query 603 ATAATGGAGTATTTACCTGGTGGGGATATGATGACTTTACTTATGAGGAAAGACACCCTT 662
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 891 ATAATGGAGTATTTACCTGGTGGGGATATGATGACTTTACTTATGAGGAAAGACACCCTC 950
Query 663 ACTGAAGATGAGGCCAGGTTTTATATTGGGGAAACTGTCCTGGCTATTGAGTCCATTCAC 722
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 951 ACTGAAGACGAGGCCAGGTTTTATATTGGGGAAACTGTCCTGGCTATTGAGTCCATTCAT 1010
Query 723 AAGCACAACTATATCCACAGAGATATCAAGCCTGATAATCTACTACTTGACAAAGATGGC 782
||||||||||| || |||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 1011 AAGCACAACTACATTCACAGAGATATCAAGCCTGATAATCTGCTACTTGACAAAGACGGC 1070
Query 783 CACATGAAATTGTCAGATTTTGGATTATGTAAACCACTAGACTGTAGTAATCTTCAAGAG 842
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1071 CACATGAAATTGTCAGATTTTGGATTATGTAAACCATTAGACTGTAGTAATCTTCAAGAG 1130
Query 843 AAAGACTTCACAGTTGCAAGAAACGTTAGTGGGGCTTTACAAAGTGATGGTCGCCCTGTG 902
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1131 AAAGACTTTACAGTTGCAAGAAACGTTAGTGGGGCTTTACAAAGTGATGGTCGCCCTGTG 1190
Query 903 GCGACAAGACGCACCCAACAAGAGCAACTACTAAACTGGCAGAGAAATAGAAGGATGCTT 962
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1191 GCGACAAGACGCACCCAACAAGAGCAATTACTAAACTGGCAGAGAAATAGAAGGATGCTT 1250
Query 963 GCTTATTCCACAGTTGGAACTCCTGATTACATTGCCCCAGAAGTTCTGCTGAAAAAGGGA 1022
||||||||||||||||| |||||||| || |||||||||||||||||| ||||||| |||
Sbjct 1251 GCTTATTCCACAGTTGGCACTCCTGACTATATTGCCCCAGAAGTTCTGTTGAAAAAAGGA 1310
Query 1023 TATGGAATGGAATGTGATTGGTGGTCTCTTGGCGCCATTATGTATGAAATGCTTGTGGGG 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1311 TATGGAATGGAATGTGATTGGTGGTCTCTTGGCGCCATTATGTATGAAATGCTTGTGGGG 1370
Query 1083 TTTCCGCCATTTTATTCAGATGATCCAATGACAACTTGTAGGAAGATAGTAAATTGGAGA 1142
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1371 TTTCCGCCCTTTTATTCAGATGACCCAATGACAACTTGTAGGAAGATAGTAAATTGGAGA 1430
Query 1143 AATTACTTGAAATTCCCAGATGAGGTTAGACTATCACCAGAAGCCAAGGATCTTATTTGT 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1431 AATTACTTGAAATTCCCAGATGAGGTTAGACTATCACCAGAAGCCAAGGATCTTATTTGT 1490
Query 1203 AGGCTTTTATGCAATGTTGAACAAAGACTTGGAACAAAAGGAGCAGATGAAATTAAGGGT 1262
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1491 AGGCTTTTATGCAATGTTGAACAAAGGCTTGGAACAAAAGGAGCAGATGAAATTAAGGGT 1550
Query 1263 CACCCATGGTTCAGAGGTACCGAATGGGGAAAATTGTACCAAATGAAGGCTGCCTTTATT 1322
||||| ||||| ||||| || ||||||||||||||||| |||||||| ||||||||||||
Sbjct 1551 CACCCTTGGTTTAGAGGCACAGAATGGGGAAAATTGTATCAAATGAAAGCTGCCTTTATT 1610
Query 1323 CCCCAGGTCAATGATGAGTTAGACACCCAAAATTTTGAGAAATTTGAAGAGACTGACAAG 1382
||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1611 CCCCAAGTTAATGATGAGTTGGACACCCAAAATTTTGAGAAATTTGAAGAGACTGACAAG 1670
Query 1383 CAAGTTCCAAAGTC-GACCAAGTCAGGTCCATGGAGAAAGATGCTCTCATCCAAGGACAT 1441
|||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1671 CAAGTTCCAAAGTCAG-CCAAGTCAGGTCCATGGAGAAAGATGCTCTCATCCAAAGACAT 1729
Query 1442 TAACTTTGTTGGTTATACTTACAAGAACGTAGAAATCGTAAATGATGACCAAATACCAGG 1501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1730 TAACTTTGTTGGTTATACTTACAAGAACGTAGAAATCGTAAATGATGACCAAATACCAGG 1789
Query 1502 GATAGCCGAGCTGAAGAAGAAGAGCAATAAGCCAAAGCGGCCGTCGATTAAATCCCTCTT 1561
|||||| ||| ||||||||||||||||||||||||| ||||||| |||||||| |||||
Sbjct 1790 GATAGCTGAGTTGAAGAAGAAGAGCAATAAGCCAAAAAGGCCGTCTATTAAATCTCTCTT 1849
Query 1562 TGAAGATGAAACATCTGGTGGGCCAACAACCCACCAAGGAAGCTTCTTGAATCTATTACC 1621
|||||| ||||||||||||||| |||||||||||||||||||||| ||||||||| ||||
Sbjct 1850 TGAAGACGAAACATCTGGTGGGACAACAACCCACCAAGGAAGCTTTTTGAATCTACTACC 1909
Query 1622 GACACAGATTGAAGATCCAGAGAAAGAAGGTAGTAAATCGAGCTCATCCGGGTGA-TTT- 1679
||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct 1910 GACGCAGATTGAAGATCCAGAGAAAGAAGGTAGTAAGTCGAGCTCATCCGGGTGAATTTC 1969
Query 1680 A----ACACATTTGCACAGCC 1696
| ||||||| ||||||||
Sbjct 1970 ATTTGACACATT-GCACAGCC 1989
> AT3G23310.1 | Symbols: | AGC (cAMP-dependent, cGMP-dependent
and protein kinase C) kinase family protein | chr3:8338900-8343632
FORWARD LENGTH=2487
Length=2487
Score = 1838 bits (995), Expect = 0.0
Identities = 1451/1670 (87%), Gaps = 36/1670 (2%)
Strand=Plus/Plus
Query 21 ATGGAGACTGCCAAAGCTTGGCTGAATAAGTTAAAATCTAAAGACAAGGTGAAATCTTCG 80
||||| ||||||| ||| |||||||| || ||||| ||||||| || | ||||||||||
Sbjct 504 ATGGATACTGCCAGAGCATGGCTGAAGAAATTAAAGTCTAAAGGGAAAGAGAAATCTTCG 563
Query 81 AAAAAGAAGGAAACTAC-A-A-GTAATGTAAAGGAAGGACCGAAAACAGCTGGAGGTGAA 137
|| |||||||||||| | | | | ||||| ||||| ||| | ||||||||||||||||||
Sbjct 564 AATAAGAAGGAAACTTCTAGAGGAAATGTTAAGGAGGGATCAAAAACAGCTGGAGGTGAA 623
Query 138 GAAGCACTTTCAAATATAACTAAGGAGAAGGCTGCTGCTGCTAAACTA-TATATTGAAAA 196
||||| | || ||| | || ||| |||||||||||||||| |||| | |||||||||||
Sbjct 624 GAAGCTGTGTCTAATGTGACAAAGCAGAAGGCTGCTGCTGCGAAAC-AGTATATTGAAAA 682
Query 197 TCATTACAAAATGCAAATGCAGAGTCTGCAGGAAAGAAAAGAGCGACGCAAAATGCTAGa 256
||||||||||| ||| | || |||| |||| ||||||||||||| || | ||||| ||
Sbjct 683 TCATTACAAAAAACAAGTTCAAAGTCAGCAGCAAAGAAAAGAGCGGCGTGATATGCTGGA 742
Query 257 aaaaaaaTTAGCTGCTGCAGAAGTCTCTGAGGAAGAGCAGAACAACT-TGCTAAAGGATT 315
||| || |||||||||||||||||||||||||||||||| || || | |||| ||||||
Sbjct 743 AAATAAGTTAGCTGCTGCAGAAGTCTCTGAGGAAGAGCAAAAGAA-TCTGCTTAAGGATC 801
Query 316 TGGAGATGAAGGAAACTGAATACATGCGCCGTCAGAGACATAAAATGGGAGCTGATGACT 375
| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 802 TAGAGAAGAAGGAAACTGAATACATGCGCCGTCAGAGACATAAAATGGGAACTGATGACT 861
Query 376 TCGAGCCATTGACAATGATTGGGAAGGGTGCATTCGGGGAGGTTAGGATATGTAGGGAGA 435
||||||||||||||||||| || ||||| || || || ||||||||||||||||||||||
Sbjct 862 TCGAGCCATTGACAATGATAGGAAAGGGGGCTTTTGGAGAGGTTAGGATATGTAGGGAGA 921
Query 436 AGGGAACAGGCAATGTCTATGCAATGAAGAAGCTTAAGAAATCTGAGATGCTTCGCAGAG 495
|| |||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||
Sbjct 922 AGACAACAGGCAATGTCTATGCGATGAAAAAGCTTAAGAAATCTGAGATGCTCCGTAGAG 981
Query 496 GCCAGGTGGAACATGTAAAAGCAGAGAGAAATTTACTTGCAGAAGTTGACAGCAATTGTA 555
|||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| |
Sbjct 982 GCCAGGTGGAGCATGTGAAAGCAGAGAGAAATTTACTTGCAGAGGTTGACAGCAATTGCA 1041
Query 556 TTGTCAAACTGTATTGTTCTTTCCAAGATGAGGAGTATTTGTATCTCATAATGGAGTATT 615
|||| || |||||||||||||| |||||||| |||||||||||||| || |||||||||
Sbjct 1042 TTGTGAAGCTGTATTGTTCTTTTCAAGATGAAGAGTATTTGTATCTTATTATGGAGTATC 1101
Query 616 TACCTGGTGGGGATATGATGACTTTACTTATGAGGAAAGACACCCTTACTGAAGATGAGG 675
|||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 1102 TACCTGGTGGAGATATGATGACATTACTTATGAGGAAAGACACACTTACTGAAGATGAGG 1161
Query 676 CCAGGTTTTATATTGGGGAAACTGTCCTGGCTATTGAGTCCATTCACAAGCACAACTATA 735
| || |||||| |||||||||||||| | ||||| ||||||||||| |||||||| ||||
Sbjct 1162 CAAGATTTTATGTTGGGGAAACTGTCTTAGCTATCGAGTCCATTCATAAGCACAATTATA 1221
Query 736 TCCACAGAGATATCAAGCCTGATAATCTACTACTTGACA-AAGATGGCCACATGAAATTG 794
|||||||||||||||||||||||||||| ||||| |||| ||| || |||||||| ||
Sbjct 1222 TCCACAGAGATATCAAGCCTGATAATCTGCTACTCGACAGAAGC-GGTCACATGAAGTTA 1280
Query 795 TCAGATTTTGGATTATGTAAACCACTAGACTGTAGTAATCTTCAAGAGAAAGACTTCACA 854
|| ||||||||||||||||| ||| |||| ||||||| ||| || || ||||| ||| |
Sbjct 1281 TCCGATTTTGGATTATGTAAGCCATTAGATTGTAGTATTCTCCAGGAAAAAGATTTCGTA 1340
Query 855 GTTGCA-AGAAACGTTAGTGGGGCTTTACAAAGTGATGGTCGCCCTGTGGCGACA-AGAC 912
|||||| | || | ||||||||||| ||||||||||||| ||||||||||| || ||||
Sbjct 1341 GTTGCACACAACC-TTAGTGGGGCTCTACAAAGTGATGGCCGCCCTGTGGC-ACCGAGAC 1398
Query 913 GCACCCAA-C--AA--G-AGCAACTACTAAACTGGCAGAGAAATAGAAGGATGCTTGCTT 966
| |||| | || | | ||| ||| ||||||||||||||||||||||||||||||||
Sbjct 1399 GTACCCGCTCTCAAATGGAACAATTACAAAACTGGCAGAGAAATAGAAGGATGCTTGCTT 1458
Query 967 ATTCCACAGTTGGAACTCCTGATTACATTGCCCCAGAAGTTCTGCTGAA-AAAGGGATAT 1025
|||| ||||||||||||||||| || ||||| ||||||||| || |||| ||||| ||||
Sbjct 1459 ATTCTACAGTTGGAACTCCTGACTATATTGCTCCAGAAGTTTTGTTGAAGAAAGG-ATAT 1517
Query 1026 GGAATGGAATGTGATTGGTGGTCTCTTGGCGCCATTATGTATGAAATGCTTGTGGGGTTT 1085
|| |||||||||||||||||||| ||||| || || ||||||||||||||||||||||||
Sbjct 1518 GGCATGGAATGTGATTGGTGGTCACTTGGTGCGATCATGTATGAAATGCTTGTGGGGTTT 1577
Query 1086 CCGCCATTTTATTCAGATGATCCAATGACAACTTGTAGGAAGATAGTAAATTGGAGAAAT 1145
|| |||||||||||||| || ||||||||||||||||| |||||||||||||||| ||||
Sbjct 1578 CCACCATTTTATTCAGACGAGCCAATGACAACTTGTAGAAAGATAGTAAATTGGAAAAAT 1637
Query 1146 TACTTGAAATTCCCAGATGAGGTTAGACTATCACCAGAAGCCAAGGATCTTATTTGTAGG 1205
|| || |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 1638 TATTTAAAATTCCCTGATGAGGTTAGGCTATCACCAGAAGCCAAGGATCTAATTTGTAGA 1697
Query 1206 CTTTTATGCAATGTTGAACAAAG-ACTTGGAACAAAAGGAGCAGATGAAATTAAGGGTCA 1264
||||||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||
Sbjct 1698 CTTTTATGCAACGTAGAACAAAGGA-TTGGAACAAAAGGAGCAAATGAAATTAAGGAACA 1756
Query 1265 CCCATGGTTCAGAGGTACCGAATGGGGAAAA-TTGTACCAAATGAAGGCTGCCTTTATTC 1323
||| |||||||| ||| |||||||| |||| ||||| || ||||||||||| |||||||
Sbjct 1757 CCCTTGGTTCAGTGGTGTCGAATGGG-AAAAGTTGTATCAGATGAAGGCTGCTTTTATTC 1815
Query 1324 CCCAGGTCAATGATGAGTTAGACACCCAAAATTTTGAGAAATTTGAAGAGACTGACAAGC 1383
|||| || ||||| ||| | |||||||||||||| || ||||| ||||||||||| ||||
Sbjct 1816 CCCAAGTTAATGACGAGCTGGACACCCAAAATTTCGAAAAATTCGAAGAGACTGATAAGC 1875
Query 1384 AAGTTCCAAAGTCGACCAAG-TCAGGTCCATGGAGAAAGATGCTCTCATCCAAGGACATT 1442
||||||| ||| || |||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1876 AAGTTCCGAAGACG-CCAAAATCAGGTCCATGGAGAAAGATGCTCTCATCCAAAGACATA 1934
Query 1443 AACTTTGTTGGTTATACTTACAAGAACGTAGAAATCGTAAATGATGACCAAATACCAGGG 1502
|||||||| |||||||||||||||||||| ||||||||||| |||| ||| ||||||||
Sbjct 1935 AACTTTGTGGGTTATACTTACAAGAACGTTGAAATCGTAAACCATGATCAATTACCAGGG 1994
Query 1503 ATAGCCGAGCTGAAGAAGAAGAGCA-ATAAGCCAAAGCGGCCGTCGATTAAATCCCTCTT 1561
||||| ||||||||||||||||||| | |||||||||||||| || ||||||||||||||
Sbjct 1995 ATAGCTGAGCTGAAGAAGAAGAGCACA-AAGCCAAAGCGGCCATCAATTAAATCCCTCTT 2053
Query 1562 TGAAGATGAAACATCTGGTGGG-CCAACAACCCACCAAGGAAGCTTCT-TGAATCTATTA 1619
||| |||||| || | || | ||| ||| ||||||||||||||| | |||| || ||
Sbjct 2054 TGAGGATGAATCAGCCAGTAGCACCA-CAAGCCACCAAGGAAGCTT-TATGAAACTCTTG 2111
Query 1620 CCGACACAGATTGAAGATCCAGAGAAAGAAGGTAGTAAATCGAGCTCATC 1669
|| ||||| || |||| |||||||||||||| | ||||| ||||||||
Sbjct 2112 CCAACACAAATCGAAGTTCCAGAGAAAGAAG--AC-AAATCAAGCTCATC 2158
> AT5G09890.2 | Symbols: | Protein kinase family protein | chr5:3085545-3089010
REVERSE LENGTH=1984
Length=1984
Score = 161 bits (87), Expect = 2e-38
Identities = 315/421 (75%), Gaps = 32/421 (8%)
Strand=Plus/Plus
Query 963 GCTTATTCCACAGTTGGAACTCCTGATTACATTGCCCCAGAAGTTCTGCTGAAA-AAGGG 1021
|||||||| || |||||||||| ||||||||| || |||||||| || || ||| || ||
Sbjct 1069 GCTTATTCAACCGTTGGAACTCTTGATTACATGGCTCCAGAAGTACTCCT-AAAGAAAGG 1127
Query 1022 ATATGGAATGGAATGTGATTGGTGGTCTCTTGGCGCCATTATGTATGAAATGCTT-GTGG 1080
|||||||||||||||||||||||||||||| ||||| ||| ||||||| ||| || || |
Sbjct 1128 ATATGGAATGGAATGTGATTGGTGGTCTCTCGGCGCAATTTTGTATGAGATG-TTAGTTG 1186
Query 1081 GGTTTCCGCCATTTTATTCAGATGATCCAA-TGACAACTTGTAGGAAGATAGTAAATTGG 1139
||| ||| ||||| | ||| ||||| || | | ||| || | |||||| | ||||||
Sbjct 1187 GGTATCCCCCATTCTGTTCTGATGACCCCCGT-ATAACATGCCGCAAGATAATTAATTGG 1245
Query 1140 AGAA-ATTACTTGAAATTCCCAGATGAGGTTAGACTATCACCA-GAAGCCA-AGGATCTT 1196
|| || |||||| ||||| || || | | ||||| | ||||||| || | |||
Sbjct 1246 AGGGTATG-CTTGAAGTTCCCTGAAGAACCAAAAATATCAG-ATGAAGCCAGAG-A-CTT 1301
Query 1197 -ATTTGTAGGCT--TTTATGCAATGTTGAA-CAAAGACTTGG-AACAAAAGGAGCAGATG 1251
|||||| || | ||| || | |||||| ||| | |||| ||| | ||| | || |
Sbjct 1302 GATTTGTCGGTTGCTTTGTG-A-TGTTGATTCAAGG--TTGGGAACCAGAGGTGTTGAGG 1357
Query 1252 AAATTAAGG-GTCACCCATGGTTCAGAGGTACCGAATGGGGA-AAATTGTACCAAATGAA 1309
| || ||| | || |||||||||| ||| ||| ||||| | ||| |||| | ||| |
Sbjct 1358 AGATAAAGTCG-CATCCATGGTTCAAAGGCACCCCATGGG-ACAAACTGTATGACATGGA 1415
Query 1310 GGCTGCCTT-TATTCCCCAG-GTCAATG-ATGAGTTAGACACCCAAAATTTTGAGAAATT 1366
||| || || || ||| | ||| ||| | || ||||||| |||||||||||||| ||
Sbjct 1416 GGCAGC-TTATAGACCC-ATTGTCGATGGA-GAACTAGACACACAAAATTTTGAGAAGTT 1472
Query 1367 T 1367
|
Sbjct 1473 T 1473
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83834910150
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5