BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg946996 Length=584 Score E Sequences producing significant alignments: (Bits) Value AT4G08990.1 | Symbols: | DNA (cytosine-5-)-methyltransferase f... 370 9e-102 AT4G14140.2 | Symbols: DMT2 | DNA methyltransferase 2 | chr4:81... 353 9e-97 AT5G49160.1 | Symbols: MET1, MET2, METI, DDM2, DMT01, DMT1 | me... 320 9e-87 AT4G13610.1 | Symbols: MEE57 | DNA (cytosine-5-)-methyltransfer... 215 4e-55 > AT4G08990.1 | Symbols: | DNA (cytosine-5-)-methyltransferase family protein | chr4:5764781-5770496 FORWARD LENGTH=4539 Length=4539 Score = 370 bits (200), Expect = 9e-102 Identities = 240/260 (92%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 61 GGTGTATCGGATACAAAGTGGGCGATCGAGTATGAAGAGCCAGCTGGGCAAGCTTTTAAA 120 |||||||| ||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct 3271 GGTGTATCTAATACAAAGTGGGCGATCGAGTATGAAGAGCCAGCTGGTCATGCGTTTAAA 3330 Query 121 CAAAACCATCCTGACGCGACGGTTTTTGTTGACAACTGCAATGTGATTCTTAGGGCTATA 180 ||||||||||| || || |||||||||||||||||||||||||| ||||||||||||||| Sbjct 3331 CAAAACCATCCCGAAGCAACGGTTTTTGTTGACAACTGCAATGTCATTCTTAGGGCTATA 3390 Query 181 ATGGAGAAATGTGGAGATGTGGATGATTGTATCTCTACTACGGAGGCAGCTGAACTTGCA 240 |||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||| | Sbjct 3391 ATGGAGAAATGTGGAGATGTCGATGATTGTGTCTCTACTGTGGAGGCAGCTGAACTTGTA 3450 Query 241 GCTAAACTTGATGAGAACCAGAAGAGTACTCTGCCACTGCCTTGTCAAGTGGATTTCATC 300 |||||||||||||||||||| |||||||| |||||||| ||| |||||| |||||||||| Sbjct 3451 GCTAAACTTGATGAGAACCAAAAGAGTACCCTGCCACTTCCTGGTCAAGCGGATTTCATC 3510 Query 301 AACGGAGGGCCTCCATGCCA 320 | |||||||||||||||||| Sbjct 3511 AGCGGAGGGCCTCCATGCCA 3530 Score = 279 bits (151), Expect = 1e-74 Identities = 178/191 (93%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 327 GTTCGTAGTACTAAATTTGGTG--CCTTTCCACTCAATCACGGTGAGAGACACAATCGGC 384 ||||||| |||||||||||| | || |||| |||||||||||||||||||||||||||| Sbjct 3904 GTTCGTAATACTAAATTTGGCGCACCGTTCCGCTCAATCACGGTGAGAGACACAATCGGC 3963 Query 385 GATCTTCCACTAGTAGAAAACGGAGAATCCAAGCTAAACAAAGATTATGGAGCTACTCCA 444 |||||||||||||||||||||||||| |||||| |||||||||| ||| || |||||||| Sbjct 3964 GATCTTCCACTAGTAGAAAACGGAGAGTCCAAGATAAACAAAGAGTATAGAACTACTCCA 4023 Query 445 GTCTCGTGGTTCCAAAAGAAGATAAGAGGAAACATGATTGTTCTCACTGATCATATATGC 504 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct 4024 GTCTCGTGGTTCCAAAAGAAGATAAGAGGAAACATGAGTGTTCTCACTGATCATATCTGC 4083 Query 505 AAAGGGCTGAA 515 ||||||||||| Sbjct 4084 AAAGGGCTGAA 4094 > AT4G14140.2 | Symbols: DMT2 | DNA methyltransferase 2 | chr4:8146345-8152131 FORWARD LENGTH=4638 Length=4638 Score = 353 bits (191), Expect = 9e-97 Identities = 280/320 (88%), Gaps = 18/320 (6%) Strand=Plus/Plus Query 2 TTTATCTTTCAAAACGCTTGAACAACATGTATTCATATGCATGGTTTATATGTACACAAG 61 |||||| ||| |||| |||||| ||| | |||| | |||||| |||| | |||| ||||| Sbjct 3327 TTTATC-TTCTAAACACTTGAA-AACTTTTATTAAGATGCAT-GTTT-TGTGTA-ACAAG 3381 Query 62 GTGTATCGGA-TACAAAGTGGGCGATCGAGTATGAAGAGCCAGCTGGGCAAGCTTTTAAA 120 ||||||| | |||||||||||||||||||||||||||||||||||| || || |||||| Sbjct 3382 GTGTATC-TACTACAAAGTGGGCGATCGAGTATGAAGAGCCAGCTGGTCATGCGTTTAAA 3440 Query 121 CAAAACCATCCTGACGCGACGGTTTTTGTTGACAACTGCAATGTGATTCTTAGGGCTATA 180 |||||||||||||| || ||||||||||||||||||||||||| | | | ||| Sbjct 3441 CAAAACCATCCTGAAGCAACGGTTTTTGTTGACAACTGCAATG-G---C--A-----ATA 3489 Query 181 ATGGAGAAATGTGGAGATGTGGATGATTGTATCTCTACTACGGAGGCAGCTGAACTTGCA 240 |||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| Sbjct 3490 ATGGAGAAATGTGGAGATGTCGATGATTGTGTCTCTACTGTGGAGGCAGCTGAACTTGCA 3549 Query 241 GCTAAACTTGATGAGAACCAGAAGAGTACTCTGCCACTGCCTTGTCAAGTGGATTTCATC 300 |||||||||||||||||||| |||||||| |||||||| ||| ||||||| ||||||||| Sbjct 3550 GCTAAACTTGATGAGAACCAAAAGAGTACCCTGCCACTTCCTGGTCAAGTAGATTTCATC 3609 Query 301 AACGGAGGGCCTCCATGCCA 320 |||||||||||||||||||| Sbjct 3610 AACGGAGGGCCTCCATGCCA 3629 Score = 278 bits (150), Expect = 5e-74 Identities = 180/194 (93%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 327 GTTCGTAGTACTAAATTTGGTG--CCTTTCCACTCAATCACGGTGAGAGACACAATCGGC 384 ||| ||| |||||||||||||| ||||| | ||||||||||||||||||||||||||| Sbjct 4004 GTT-GTAATACTAAATTTGGTGCACCTTTTCGTTCAATCACGGTGAGAGACACAATCGGC 4062 Query 385 GATCTTCCACTAGTAGAAAACGGAGAATCCAAGCTAAACAAAGATTATGGAGCTACTCCA 444 |||||||||| |||||||||||||||||||||| |||||||||| |||||| |||||||| Sbjct 4063 GATCTTCCACCAGTAGAAAACGGAGAATCCAAGATAAACAAAGAGTATGGAACTACTCCA 4122 Query 445 GTCTCGTGGTTCCAAAAGAAGATAAGAGGAAACATGATTGTTCTCACTGATCATATATGC 504 | ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct 4123 GCCTCGTGGTTCCAAAAGAAGATAAGAGGAAACATGAGTGTTCTCACTGATCATATCTGC 4182 Query 505 AAAGGGCTGAACGA 518 |||||||||||||| Sbjct 4183 AAAGGGCTGAACGA 4196 > AT5G49160.1 | Symbols: MET1, MET2, METI, DDM2, DMT01, DMT1 | methyltransferase 1 | chr5:19932230-19938369 FORWARD LENGTH=4845 Length=4845 Score = 320 bits (173), Expect = 9e-87 Identities = 232/260 (89%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 61 GGTGTATCGGATACAAAGTGGGCGATCGAGTATGAAGAGCCAGCTGGGCAAGCTTTTAAA 120 |||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct 3394 GGTGTATCTGATGCAAAGTGGGCGATTGAGTATGAAGAGCCAGCTGGGCAGGCTTTTAAA 3453 Query 121 CAAAACCATCCTGACG-CGACGGTTTTTGTTGACAACTGCAATGTGATTCTTAGGGCTAT 179 |||||||||||||| | | || |||||||||||||||||||||||||||||||||||||| Sbjct 3454 CAAAACCATCCTGA-GTCAACAGTTTTTGTTGACAACTGCAATGTGATTCTTAGGGCTAT 3512 Query 180 AATGGAGAAATGTGGAGATGTGGATGATTGTATCTCTACTACGGAGGCAGCTGAACTT-G 238 |||||||||| |||||||| ||||||||| |||||||||| |||||| |||| || | Sbjct 3513 AATGGAGAAAGGTGGAGATCAAGATGATTGTGTCTCTACTACAGAGGCAAATGAA-TTAG 3571 Query 239 CAGCTAAACTTGA-TGAGAACCAGAAGAGTACTCTGCCACTGCCTTGTCAAGTGGATTTC 297 |||||||||| | |||| | |||||||||||||||||||||||| |||||||||| ||| Sbjct 3572 CAGCTAAACTA-ACTGAGGAGCAGAAGAGTACTCTGCCACTGCCTGGTCAAGTGGACTTC 3630 Query 298 ATCAACGGAGGGCCTCCATG 317 ||||| || || |||||||| Sbjct 3631 ATCAATGGTGGACCTCCATG 3650 > AT4G13610.1 | Symbols: MEE57 | DNA (cytosine-5-)-methyltransferase family protein | chr4:7915022-7921231 FORWARD LENGTH=4215 Length=4215 Score = 215 bits (116), Expect = 4e-55 Identities = 138/149 (93%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 172 AGGGCTATAATGGAGAAATGTGGAGATGTGGATGATTGTATCTCTACTACGGAGGCAGCT 231 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 3109 AGGGCTATAATGGAGAAATGTGGAGATGTTGATGATTGTATCTCTACTACGGAGGCAGCT 3168 Query 232 GAACTTGCAGCTAAACTTGATGAGAACCAGAAGAGTACTCTGCCACTGCCTTGTCAAGTG 291 ||||||||| | |||||||||||||||||||||||||| || ||||| || |||||||| Sbjct 3169 GAACTTGCAACGAAACTTGATGAGAACCAGAAGAGTACCCTACCACTTCCCGGTCAAGTG 3228 Query 292 GATTTCATCAACGGAGGGCCTCCATGCCA 320 |||||||||| ||||||||||| ||||| Sbjct 3229 GATTTCATCAGTGGAGGGCCTCCGTGCCA 3257 Score = 156 bits (84), Expect = 3e-37 Identities = 104/114 (91%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 61 GGTGTATCGGATACAAAGTGGGCGATCGAGTATGAAGAGCCAGCTGGGCAAGCTTTTAAA 120 |||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct 2965 GGTGTATCCGATACAAAGTGGGCGATCGAGTATGAAGAGCCAGCTGCACAAGCTTTCAAA 3024 Query 121 CAAAACCATCCTGACGCGACGGTTTTTGTTGACAACTGCAATGTGATTCTTAGG 174 ||||||||||| | | |||||||||||||||||||||||||| ||||||||| Sbjct 3025 CAAAACCATCCCAAAACAACGGTTTTTGTTGACAACTGCAATGTAATTCTTAGG 3078 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 28080888173 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5