BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg947146 Length=1132 Score E Sequences producing significant alignments: (Bits) Value AT1G67270.1 | Symbols: | Zinc-finger domain of monoamine-oxida... 551 6e-156 > AT1G67270.1 | Symbols: | Zinc-finger domain of monoamine-oxidase A repressor R1 protein | chr1:25183177-25185939 REVERSE LENGTH=1772 Length=1772 Score = 551 bits (298), Expect = 6e-156 Identities = 734/941 (78%), Gaps = 44/941 (5%) Strand=Plus/Plus Query 192 TTGAGGTTCAAATGCCTGAAGTTATAAATTTAACTTCCGTTTTAGGCTTTGATGTACCTT 251 |||||| |||| | ||||| | ||||| || |||| |||| | || ||||| |||| Sbjct 733 TTGAGGCTCAACTTCCTGAGGGTATAAGCTTGACTTGTGTTTCACGCATTGATATACCAA 792 Query 252 TTGAAGAAGTTGGAAATTTATTTCAACTTCTAGAATTTTGTTCAGTCTTTGGAAAGG-AT 310 |||||||| ||||||| ||| ||| ||| | || ||||| |||| ||||||||||| | Sbjct 793 CTGAAGAAGCTGGAAATGTATGTCAGCTTTTCGAGTTTTGCTCAGCCTTTGGAAAGGCA- 851 Query 311 CTGGGTTTG-AGAGAAGGACAACCT-ACATCTATTGTGCACGAGCT-TTTTTCAAGCGAG 367 || | |||| || |||||||| || | | ||||||| | ||||| ||| | | | | | Sbjct 852 CTTGCTTTGAAG-GAAGGACATGCTGA-AACTATTGTCCGTGAGCTGTTTAT-ATGTGGG 908 Query 368 CGT-ACA-AAGG-GACAACAATACTGCTCTATTATCTC-GATGATAATCCAGTTGTTGGA 423 ||| ||| |||| ||||||||||||||||||||| ||| |||||| |||||||||||||| Sbjct 909 CGTAACACAAGGAGACAACAATACTGCTCTATTA-CTCAGATGATGATCCAGTTGTTGGA 967 Query 424 GTTAATATCACATGATAGAAATATGTCTTTGTCTTTAAGTGAAATTAATAACAATTGGTT 483 ||||||||| | |||||| | |||||||||||| |||||| || | | || |||||| Sbjct 968 TTTAATATCAAAGGATAGAGAGATGTCTTTGTCTCTAAGTGCAACGGACAGCAGTTGGTT 1027 Query 484 CAATGCTATTGGGGATTTAGTATTGAAGTCGGGAGTTTTAAGTAATGAATTCCCACCT-G 542 || ||||| || || | ||| |||||| | |||||| ||| |||| ||||| || | Sbjct 1028 CACGGCTATAGGAGAGATCCTATCGAAGTCAGAAGTTTTGAGTGATGAGCTCCCA-CTAG 1086 Query 543 AAACATTTAAAGGAGGTGATGCAAAGTATAATG-AGATGGATGCTTCAAGAAGGCTCAAG 601 |||| ||| ||| |||| ||| |||| | | ||||| |||| ||||||| ||||||| Sbjct 1087 AAACTTTTGTAGGGGGTGTTGCTGCGTATGA-GAAGATGAATGCATCAAGAAAGCTCAAG 1145 Query 602 CTTCTGAACTTCTTATGTGATGAATCACTTACCACATTGGCAATGAGGAA-TATCATTAA 660 ||||| || |||||||||||||||||||||| ||||| |||||||||||| || ||| || Sbjct 1146 CTTCTAAATTTCTTATGTGATGAATCACTTAGCACATGGGCAATGAGGAATTA-CATAAA 1204 Query 661 GAACaaaattttggagtttgaagcaa-agaaaaaagaagcaaaacaaaaggctacagttg 719 | | ||| | |||| || || || |||||| ||||| |||||||||||| ||| | Sbjct 1205 TAGCCAAACTGAAGAGTGTGGAG-AACGGAAAAAGGAAGCTAAACAAAAGGCTGCAGCCG 1263 Query 720 caaataaaaaggaaaaaCAACTGAGGA-AGACGATGCGAA-GTGATTTTGCCAAAATCTA 777 |||| ||||||| || || || | | ||| ||||| || |||| ||||| ||||| | Sbjct 1264 CAAAGCAAAAGGAGAAGCAGCTCA-AACAGAAGATGC-AAGGTGAGGTTGCC-AAATCCA 1320 Query 778 -TAAGGA-AAATACCGGAGTTCCGCTCTCCAGTGAAGAGCATAAC-AAACTTTTGTCTCA 834 || ||| ||| | ||||| ||| | || | ||| || || ||| || | ||||||| Sbjct 1321 TTATGGAGAAA-AACGGAGCTCCATTGTCTATTGAGGAACACAACTCAA-TCGTGTCTCA 1378 Query 835 ACTAAGAGCTCAAGCTAAAGAAGCTCATGACGAGATGATGGAGGCAAAGAACAT-AATTT 893 | |||||| | ||||||||||||||||||| || ||||||||||||||| ||| || | Sbjct 1379 AATAAGAGATGAAGCTAAAGAAGCTCATGAAGAAATGATGGAGGCAAAGGGCATGAA-AT 1437 Query 894 CTAAAAAGATGCAAACATGTGATGTTG-TTAGAACTG-ACCAAAACATAATAGAGGACAA 951 |||||| || || | |||||||| | |||||| | ||| || ||| | || || || Sbjct 1438 CTAAAATGACGCTTATATGTGATG-CGCGTAGAACGGAACC-AATCATGTTGGATGATAA 1495 Query 952 TGGACTTGTTCTCTGGAAACTT-AAGTGTTTTGAGGAAGAACCAA-AGTTTTTGCTTCAA 1009 ||| |||||||||||||| || ||||||||||| |||||| ||| |||||||||||| Sbjct 1496 TGGTTTTGTTCTCTGGAAA-TTGAAGTGTTTTGAAGAAGAA-CAATTTTTTTTGCTTCAA 1553 Query 1010 GATCTAGGAACATTTGATGATTTAAGTCCTTATGAAAAATGGTTAGCCTTTAAGGCTGAA 1069 |||||||||||||||||||||||| |||| |||||| ||||||||| ||||| |||| Sbjct 1554 GATCTAGGAACATTTGATGATTTATGTCCACATGAAAGATGGTTAGCTTTTAAACCTGAG 1613 Query 1070 CAGAAAG-AGGAGATAGAGAAATTTATCTCTTCCAAGAGGT 1109 |||||| || |||||||||| | |||||||| ||||||| Sbjct 1614 CAGAAACCAG-AGATAGAGAA-TATATCTCTTGTAAGAGGT 1652 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55521802770 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5