BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg947153 Length=313 Score E Sequences producing significant alignments: (Bits) Value AT3G28930.1 | Symbols: AIG2 | AIG2-like (avirulence induced gen... 263 8e-70 > AT3G28930.1 | Symbols: AIG2 | AIG2-like (avirulence induced gene) family protein | chr3:10959686-10960808 REVERSE LENGTH=797 Length=797 Score = 263 bits (142), Expect = 8e-70 Identities = 181/200 (91%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 20 AATGACTAGCTCTGATCAATCTCCGTCGCACAACGTCTTCGTCTACGGCAGTTTCCAAGA 79 |||||| ||||| ||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 80 AATGACAAGCTCCGATCAATCTCCATCGCACGACGTCTTCGTCTACGGCAGTTTCCAAGA 139 Query 80 ACCAGCCGTCGT-AAGTTTGATTCTTGAATGTTCTCCGGTCATCGTCTCTGCTCAACTCC 138 ||||||||| || || ||| ||||| |||||| |||||||||| || || |||||||||| Sbjct 140 ACCAGCCGTTGTTAA-TTTAATTCTCGAATGTGCTCCGGTCATGGTTTCCGCTCAACTCC 198 Query 139 ACGGCTATCACTTGTATAGACTCAAAGGACGTTTGCATCCATGTATTTCTCCTTCTGAGA 198 |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || | Sbjct 199 ACGGCTATCACTTGTATAGACTTAAAGGTCGTTTGCATCCATGTATTTCTCCTTCCGACA 258 Query 199 ATGGAGTAATCAAAGGCAAG 218 ||||| ||||||| |||||| Sbjct 259 ATGGATTAATCAATGGCAAG 278 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14527379461 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5