BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg947286
Length=3743
Score E
Sequences producing significant alignments: (Bits) Value
AT5G36740.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/... 2261 0.0
AT5G36670.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily... 1930 0.0
> AT5G36740.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type
zinc finger protein | chr5:14460790-14465727
FORWARD LENGTH=3540
Length=3540
Score = 2261 bits (1224), Expect = 0.0
Identities = 1357/1422 (95%), Gaps = 5/1422 (0%)
Strand=Plus/Plus
Query 1825 GAAAAATAAAGAGGGAAGAAAAACATAATAGAAAGCGTTGTACTCCGTCAGCGCGTAGTT 1884
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 1514 GAAAAATAAAGAGGGAAGAAAAACATAGTAGAAAGCGTTGTACTCCGTCAGCTCGTAGTT 1573
Query 1885 CTTTAG-AGGATGCAGATGCCAAGGAGGGTGGATACATTTTATTTGAAGGGAAACGCACC 1943
|||| | | |||| ||| ||||||||| ||| ||||| |||||||||||||||||||||
Sbjct 1574 CTTT-GAAAGATGTGGATTCCAAGGAGGATGGGTACATATTATTTGAAGGGAAACGCACC 1632
Query 1944 ATGCTGGGGTGGATGATTGATTCAACCATTGTGCCACTTAACGGAAAAGTTCAGTGCATG 2003
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1633 ATGCTGGGTTGGATGATTGATTCAACCATTGTGCCACTTAACGGAAAAGTTCAGTGCATG 1692
Query 2004 GACTGCAAGAAGACAGACATGCTTCTAGAAGGAATAATTACAAAAGAGGGTATTCGATGC 2063
|||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct 1693 GACTGCAAGAAGACAGACATACTTCTAGAAGGAATTATCACAAAAGAGGGTATTCGATGC 1752
Query 2064 AACTGCTGCGATGAAGTGTTCTCTGTTCTTGATTTCGAGGTTCATGCTGGAGGGAAGCAC 2123
|||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| | |
Sbjct 1753 AACTGCTGTGATGAAGTGTTCTCTGTTCTCGATTTCGAGGTTCATGCTGGCGGGAATCGC 1812
Query 2124 AACCAGCCATTCAAAAGTCTGTATTTAGAGGGTGGGAATTCTCTCTTGCAGTGCCTCCGT 2183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1813 AACCAGCCATTCAAAAGTCTGTATTTAGAGGGTGGGAATTCTCTCTTGCAGTGCCTCCAT 1872
Query 2184 GACTTTATGAATAAACAAAGTGAATCACAACATAAAGGGTACCATTTTGTGGACTTTTGT 2243
|| | |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct 1873 GAGTCTATGAATAAACAAAGTGAATCACAACTTAAAGGGTACCATTTTGTGGACTTTGGT 1932
Query 2244 TCTGGAGATCCAAATGATGATACGTGTGGTATTTGTGGGGATGGGGGAGATCTAATCTGC 2303
|| || |||||||||||||| || ||||||||||||||||||||||||||||| ||||||
Sbjct 1933 TCGGGGGATCCAAATGATGACACATGTGGTATTTGTGGGGATGGGGGAGATCTTATCTGC 1992
Query 2304 TGTGATGGGTGCCCATCAACATTCCATCAGAGCTGCTTGGACATaaaaaaaTTCCCTTCT 2363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1993 TGTGATGGGTGCCCATCAACATTCCATCAGAGCTGCTTGGACATAAAAAAATTCCCTTCT 2052
Query 2364 GGTGCCTGGTATTGTTGCAACTGCTCATGCAAATTTTGCGAGAAAGTTGAGGCAGCTATA 2423
|||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||| |
Sbjct 2053 GGTGCCTGGTATTGTTACAACTGCTCATGCAAATTTTGCGAGAAAGATGAGGCTGCTAAA 2112
Query 2424 CATGACACTTCAACTCTACACTCCTTATCAAGTTGCCGCCTATGTGAAGAGAAATGCTCT 2483
||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct 2113 CATGAGACTTCAACTCTACCCTCCTTATCGAGTTGCCGCCTATGTGAAGAGAAATGCTCT 2172
Query 2484 AATCATTACCCTCACACTCTTGCAGATCACCAAGCATGCATCAACCAAGATGGCACAGTG 2543
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2173 AAGCATTACCCTCACACTCTTGCAGATCACCAAGCATGCATCAACCAAGATGGCACGGTG 2232
Query 2544 CCTGGTGAAAGGCGTACTGATTCATTTTGTGGAAAGTATTGTCAAGAGTTATTCGAGGAA 2603
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2233 CCTGGTGAAAGGAGTACTGATTCATTTTGTGGAAAGTATTGTCAAGAGTTATTCGAGGAA 2292
Query 2604 CTTCAGTTACTCATTGGAGTAAAACAACCACTGCCTGAGGGCTTTTCCTGGTCATTCCTT 2663
||||||||| |||||||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct 2293 CTTCAGTTATTCATTGGAGTAAAACACCCACTGCCTGAGGGATTTTCATGGTCATTCCTT 2352
Query 2664 CGCCGCTTTGAGCTCCCTAGTGAGGTTGCCGATTGTGACATATCTGAGAGGGTTGCATAT 2723
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 2353 CGCCGCTTTGAGCTCCCTAGTGAGGTTGCCGATTGTGACATATCTGAGAAGATTGCATAT 2412
Query 2724 AATGCCAAAATGGCTGTTGCATTTTCTGTTATGGATGAGTGCTTTTCACCTTTGGTTGAT 2783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2413 AATGCCAAAATGGCTGTTGCATTTTCTGTTATGGATGAGTGCTTTTCACCTTTGGTTGAT 2472
Query 2784 CACAGGAGTGGTGTCAACCTGCTTCAAAACATTGTTTATAATTTTGGGTCGAACTTCCAT 2843
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2473 CACAGGAGTGGAGTCAACCTGCTTCAAAACATTGTTTATAATTTTGGGTCGAACTTCCAT 2532
Query 2844 CGGCTAAATTTCAGCAGTTTTCTCACTGCTGTTTTGGAGAGGGGTGATGAAATCATTGCT 2903
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2533 CGGCTAGATTTCAGCAGTTTTCTCACTGCTGTTTTGGAGAGGGGTGATGAAATCATTGCT 2592
Query 2904 GTGGCGTCTATCAGGATCCACGGCAATCAACTGGCAGAAATGCCGTTTATCGGAACCCGC 2963
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2593 GTGGCGTCTATTAGGATACACGGCAATCAACTGGCAGAAATGCCGTTTATCGGAACCCGC 2652
Query 2964 TATATGTACAGGCGTCAAGGGATGTGTCGTCGACTAATGGATGGCATTGAATCTGCGCTT 3023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2653 TATATGTACAGGCGTCAAGGGATGTGTCGTCGACTAATGGATGGCATTGAATCTGCGCTT 2712
Query 3024 GGTTCTCTCAAAGTAGACAAGTTAGTCATACCAGCAGTGCCAGAACTGATTGATACATGG 3083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2713 GGTTCTCTCAAAGTAGACAAGTTAGTCATACCAGCAGTGCCAGAACTGATTGATACATGG 2772
Query 3084 ACTTCAGGCTTTGGCTTCACGCCTGTTAATGAATCAGAGaaaaaaaGAATTAAGAATCTG 3143
|||||||||||||||||| | ||||| ||||| || |||||||||| |||||||||||||
Sbjct 2773 ACTTCAGGCTTTGGCTTCGCACCTGTCAATGATTCTGAGAAAAAAACAATTAAGAATCTG 2832
Query 3144 AACTTGTTGGTGTTCCCTGGTGTAGACATGTTGGGGAAATCATTGGTGAAGGAGAAGATC 3203
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2833 AACTTGTTGGTGTTCCCTGGCGTAGACATGTTGGGGAAATCATTGGTGAAGGAGAAGATC 2892
Query 3204 ACTGACTCAATTGTGTCCTCTTCCAATG-TTGA-TAGCTGTT 3243
||||||||| |||| || ||| |||||| || | | ||||||
Sbjct 2893 ACTGACTCAGTTGTTTCATCTCCCAATGGTTTAGT-GCTGTT 2933
Score = 843 bits (456), Expect = 0.0
Identities = 548/593 (92%), Gaps = 4/593 (1%)
Strand=Plus/Plus
Query 1134 GGACCTGAATCTGATGGAAAGAAGATGGTACTTAAGCGTGGAAGACCTCCAACACCACAG 1193
|||||||| ||| |||||| || |||||||| ||||||||||||||||||||||||||||
Sbjct 928 GGACCTGAGTCTAATGGAAGGAGGATGGTACGTAAGCGTGGAAGACCTCCAACACCACAG 987
Query 1194 AAAAAGAGGAAATCGGGGATGACAGATGAATCAGATTATAAAGCAAAGAAGAGACTGAAA 1253
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 988 AAAAAGAGGAAATCGGGGATGACAGATGAATCAGATTGGAAAGCAAAGAAGAGACTGAAA 1047
Query 1254 CTTTTTGAGAGTCCCTTAGAGTCACAGGC-CAACAATCCCTTAATTGATGGCGAAAGGAT 1312
|||| ||||||||| |||||||||| ||| ||||||||| |||||||||| |||||||||
Sbjct 1048 CTTTGTGAGAGTCCGTTAGAGTCAC-GGCACAACAATCCTTTAATTGATGACGAAAGGAT 1106
Query 1313 GATTGGGGAGCAACAGAATAAGCAAACTGAAGCTGGAAGACTATCC-AGATCAAAGTCTA 1371
|||||| || |||| || ||||||||||||||||||| ||| || | |||||||||||||
Sbjct 1107 GATTGGCGAACAACGGAGTAAGCAAACTGAAGCTGGAGGAC-ATTCGAGATCAAAGTCTA 1165
Query 1372 AGAAAATGCTGAGTGACCGGATACTGCAGTTACTTCTAGCTGCTGGTTGGACTGTCGAAT 1431
||||||||||||||||| | |||||||||||||||||| |||||||||||||||| ||||
Sbjct 1166 AGAAAATGCTGAGTGACAGAATACTGCAGTTACTTCTAACTGCTGGTTGGACTGTTGAAT 1225
Query 1432 ATAGGCCTCGAAATGGGAGAGCTTATGAAGATGCTGTGTATCTTAATCCTGAGGGAAAGA 1491
|||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 1226 ATAGGCCTCGAAATGGGAGAGCTTATCAAGATGCTGTGTATCTTAATCCAGAGGGAAAGA 1285
Query 1492 CTCACTGGTCAGTGACTAAGGCTTATCAAGTTTACAAAAAACATTTGGAAAGCAGCATGA 1551
|||||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||
Sbjct 1286 CTCACTGGTCAGTGACTAAGGCTTATCAAGTTTATAAAAAACAATTGGAAAGCAACCCGA 1345
Query 1552 ATGATCAAATGAACTCTACCACTGGTTCTGGTTGTGGCTTGCTACCAGAAGAGGACCTTC 1611
||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct 1346 ATGATCAAAAGAACTCTACCACTGGTTCTGGTTTTGGCTTGCTACCAGAAGAAGACCTTC 1405
Query 1612 ACCTATTAGAGAGAAGAATTCAGaaaaaaaGGAGCGATACAGGTAAGCATAGGCCAAAAC 1671
| ||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 1406 ATCTATTAGAGAGAACAATTCAGAAAAAAAGGAGCGATACAGGTAAGCAAAGGTCAAAAT 1465
Query 1672 TGAAGGACAGAGATACTAATGAAAACGTGGTTTCAACAAAGGGAAGGGGAAAA 1724
|||||||||||||||||||||| | | |||||||||||||||||| ||||||
Sbjct 1466 TGAAGGACAGAGATACTAATGACATCTTGGTTTCAACAAAGGGAACAGGAAAA 1518
Score = 841 bits (455), Expect = 0.0
Identities = 843/1015 (83%), Gaps = 88/1015 (9%)
Strand=Plus/Plus
Query 21 ATGTTTGAAACTAAAGAGAAAAAGGGTTTTGATTTAAACGAGTGTGCTTCAATTGAAGAT 80
||||| |||||||| ||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 1 ATGTTAGAAACTAACGAGCAAAAGGGTTTTGATTTAAACGTGTGTGCTTCAATTGAAGAT 60
Query 81 TTCAGTGAATCTGAGCGTGAA-ACTGATAGCTTGGTTGATGATGTGATGGAGAGAACTCC 139
|||||||| ||||| | | || ||| || || ||| | |||| || |
Sbjct 61 TTCAGTGAGTCTGA-CATTAAGGCTG--AG---GG-TGA--AACTGAT----AG---TTT 104
Query 140 GAAAGATGGTAACGTGGAGAATGTAATTGAGATTAAGGATAAGAAAAAAGTGAAGGTTAA 199
| |||||||| ||||||||||| |||||||||||||||||| |||| || | |
Sbjct 105 GGTTGATGGTAATGTGGAGAATGTGATTGAGATTAAGGATAAG--AAAA---AA-G-T-- 155
Query 200 GCCGATTGAGCGTGAAATTCTTATTACGCGGAGGGTTCTTCGCTCAGGCTCTGTGGCAAG 259
|||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 156 ---GATTGAGCGTGAGATTCTCATTACGCGTAGGGTTCTTCGCTCAGGCTCTGTGGCAAG 212
Query 260 GGATCCGGTAAACAGTGATAAACATTGTAAGTCTGTGAAAAAGAAAGGAAAGTGTGCTGA 319
|||| |||||||||||||||||||||||| ||||||||| ||||||||| ||| ||
Sbjct 213 GGATTTAGTAAACAGTGATAAACATTGTAAGGCTGTGAAAAGGAAAGGAAA-TGT--TG- 268
Query 320 TAAGGGTGACAAGATGGGTAAAGTTAGTGGCAGAAGTTCTGTTGATGAGGTTAGAGAAGA 379
| | | | ||| | | | | | |||||||||||||||| | ||||||
Sbjct 269 T-----T-A---G-TGG-T---G---G----A-A-GTTCTGTTGATGAGGTGAAAGAAGA 305
Query 380 AGTGGAACATGAGCAT-TTGAAATCTCCTG-TACCTGAGGAGATTTGTGGAGATGATTTT 437
|||| |||| ||| | || || ||| || |||||||||||||| ||||||||||||||
Sbjct 306 AGTGAAACAGGAGTGTGTT-AAGTCTT-TGGTACCTGAGGAGATTCGTGGAGATGATTTT 363
Query 438 GGAAGTCAAGTTAAACTGGAATCTAAGGATGACAGATCAGATGATGGAAATGGGAGTTTT 497
||||| |||| ||| |||||||||||||||| ||||||||||||||||| ||
Sbjct 364 CGAAGTGAAGTGAAAGTGGAATCTAAGGATGATAGATCAGATGATGGAAA----AG---- 415
Query 498 GAGCCCCATGGAAAAGAAGTGGAAGTTCAACGCAAAAGAGGAAGGCCTCGAAAGTTTGGG 557
| | | | ||| | |||||||| |||||||||||||||||||||||||||
Sbjct 416 -A-----A-G-A---GAA----A-GTTCAACGTAAAAGAGGAAGGCCTCGAAAGTTTGGG 459
Query 558 ATCAGCAGTCAATCTGATGATAACGGGTCAATCTCAAACTGTAAAATTGGGACATCTTTA 617
|| |||||||||||||||||||| |||| ||||||||| |||||| || |||||||||||
Sbjct 460 ATGAGCAGTCAATCTGATGATAATGGGTTAATCTCAAATTGTAAACTTCGGACATCTTTA 519
Query 618 GATAAGGAGGAAGAACTGGTAAGAGATGATAATGATGCGAAACTTATTGGCGGAAGCTGC 677
| |||| || ||||||||||| | |||||||||| || ||||||| |||| |||||||||
Sbjct 520 GGTAAGAAGAAAGAACTGGTAGGCGATGATAATGTTGAGAAACTTGTTGGTGGAAGCTGC 579
Query 678 TTTAACAAGGAGAAAGTAGAAGTAAAACTTGAGCACGGGGAATATGCTGAAGCTAAAGAG 737
|||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||
Sbjct 580 TTTAACAAGGAGAAAGCAGAAGTAAAACTTGAGCATGGGGAATATGCTGAAGATAAAGAG 639
Query 738 ATTCCTGGACCTGATTTTAGGAGCCAGGTTAAGATTGAAACCAAGGATGATGAATGTGGT 797
|||| ||||| |||||||||||| ||||||||| |||||| ||||||||||||||||||
Sbjct 640 ATTCTTGGACTTGATTTTAGGAGTCAGGTTAAGGTTGAAATCAAGGATGATGAATGTGG- 698
Query 798 GGGAGTGTCAAGCCACATGATGAAGAGCTGCAAGTTAAACGTAAACGAGGAAGGCCTAGA 857
| | ||| ||| ||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct 699 G--ATTGTTGAGCTACATGATGAAGAGTTGCAAGTTAAACGTAAACGGGGAAGGCCTAGA 756
Query 858 AAGTTGCAGATCGGCAGTCAATCTGATGAGAATCGCCCTAACACAAACTGTAAACTTGCG 917
||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 757 AAGGTGCAGATCAGCAGTCAATCTGATGAGAGTCGCCCTAACACAAACTGTAAACTTGCG 816
Query 918 AGAACTCCAGAATTAAGCAGCCCGTCGAGTGTTGACAGGATCAGTTTGAGTCGTCGGCGT 977
|||||||||||| |||| |||| ||||||||||||||| || ||||||||||||| ||||
Sbjct 817 AGAACTCCAGAACTAAGTAGCCAGTCGAGTGTTGACAGAATTAGTTTGAGTCGTCTGCGT 876
Query 978 GGTAGACCCTCTAAGACCAAGGAGACGGCGGTTGGCCTTTACATAGAAAA-GGAC 1031
||||||||| | |||||||||||||| ||||| |||||||||| ||||| ||||
Sbjct 877 GGTAGACCCCCAAAGACCAAGGAGACCTCGGTTAGCCTTTACATTGAAAAAGGAC 931
Score = 590 bits (319), Expect = 4e-167
Identities = 439/496 (89%), Gaps = 11/496 (2%)
Strand=Plus/Plus
Query 3231 GTTGATAGCTGTTTGAAGTTAACGAATGTAGAAGAGGGGGATAATGAAACAG-A--GAAT 3287
||||||||||| ||||||||||| |||||||||||||||||||||| | || | |||
Sbjct 3049 GTTGATAGCTGCTTGAAGTTAACTTATGTAGAAGAGGGGGATAATGACAGAGAATCCAAT 3108
Query 3288 CTGAAGTTATTTAACGAGTCCGTGGAGGAGAAAGAAGAGA-TAAGAAAACTGACAGATAT 3346
|| |||||| || ||| ||||||||| ||||||||||| | |||| ||| ||||||||||
Sbjct 3109 CTCAAGTTACTTGACGGGTCCGTGGAAGAGAAAGAAGACACTAAG-AAATTGACAGATAT 3167
Query 3347 AGACATCAATTCCCTTCCCGATGAAGTTGATGATTCCCATGCGTATCAAACTGATATAAA 3406
|||||||||||| ||||| |||||||||||||||||||||||| |||||| ||||| ||
Sbjct 3168 AGACATCAATTCTCTTCCTGATGAAGTTGATGATTCCCATGCGGATCAAAGTGATA-CAA 3226
Query 3407 AAG-GCACGAAAGTGGTGATTTAGAAGATAAGA-AGCCATTATCTGATGATGGCTGTGGA 3464
||| ||| |||| || |||| ||||||||||| | || ||||||||||||||||||| |
Sbjct 3227 AAGAGCAGGAAATTGATGATAAAGAAGATAAGACA-CCGTTATCTGATGATGGCTGTGAA 3285
Query 3465 GGTAAAGCTGAGGGTACTGAGGTGTCAGATCAACAACCCGATTGTAAC-ATGATAGATCA 3523
||||||||||||||||| ||| |||| |||||||||| ||| ||||| | | ||||| |
Sbjct 3286 GGTAAAGCTGAGGGTACCAAGGAGTCAAATCAACAACCGGATAGTAACAAAG-TAGATAA 3344
Query 3524 TTCCCAGCCACTTGGTAATGGTGGTACAGGGGAAGAGATTGACAACAAAAACTTAACGCT 3583
|| ||||||||||||||||||||||||||||||||| ||| ||||| || |||| ||||
Sbjct 3345 CTCTCAGCCACTTGGTAATGGTGGTACAGGGGAAGAGCTTGGCAACAGAACCTTAGCGCT 3404
Query 3584 AAAGAGAGAAGTGACTACCACATTGCGAGCATCACCCCGACTGATTCAAAGATCGTGGAG 3643
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3405 AAAGAGAGAAGTGACTCCCACATTGCGAGCATCGCCCCGACTGATTCAAAGATCGTGGAG 3464
Query 3644 AACATCGCGGGTGAACCAGAAGTACACAGGTACTACTAATGCCGTATTGCTTGACTCTCC 3703
|||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||||||
Sbjct 3465 AACATCACGGGTGAACCAGAAGTTCACAGGTACTACTAACGCCGTACTGCTTGACTCTCC 3524
Query 3704 ACACCGGTGTGTCTGA 3719
||||||||||||||||
Sbjct 3525 ACACCGGTGTGTCTGA 3540
> AT5G36670.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:14401491-14406427 FORWARD LENGTH=3582
Length=3582
Score = 1930 bits (1045), Expect = 0.0
Identities = 1160/1216 (95%), Gaps = 6/1216 (0%)
Strand=Plus/Plus
Query 1825 GAAAAATAAAGAGGGAAGAAAAACATAATAGAAAGCGTTGTACTCCGTCAGCGCGTAGTT 1884
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 1514 GAAAAATAAAGAGGGAAGAAAAACATAGTAGAAAGCGTTGTACTCCGTCAGCTCGTAGTT 1573
Query 1885 CTTTAG-AGGATGCAGATGCCAAGGAGGGTGGATACATTTTATTTGAAGGGAAACGCACC 1943
|||| | | |||| ||| ||||||||| ||| ||||| |||||||||||||||||||||
Sbjct 1574 CTTT-GAAAGATGTGGATTCCAAGGAGGATGGGTACATATTATTTGAAGGGAAACGCACC 1632
Query 1944 ATGCTGGGGTGGATGATTGATTCAACCATTGTGCCACTTAACGGAAAAGTTCAGTGCATG 2003
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1633 ATGCTGGGTTGGATGATTGATTCAACCATTGTGCCACTTAACGGAAAAGTTCAGTGCATG 1692
Query 2004 GACTGCAAGAAGACAGACATGCTTCTAGAAGGAATAATTACAAAAGAGGGTATTCGATGC 2063
|||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct 1693 GACTGCAAGAAGACAGACATACTTCTAGAAGGAATTATCACAAAAGAGGGTATTCGATGC 1752
Query 2064 AACTGCTGCGATGAAGTGTTCTCTGTTCTTGATTTCGAGGTTCATGCTGGAGGGAAGCAC 2123
|||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| | |
Sbjct 1753 AACTGCTGTGATGAAGTGTTCTCTGTTCTCGATTTCGAGGTTCATGCTGGCGGGAATCGC 1812
Query 2124 AACCAGCCATTCAAAAGTCTGTATTTAGAGGGTGGGAATTCTCTCTTGCAGTGCCTCCGT 2183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1813 AACCAGCCATTCAAAAGTCTGTATTTAGAGGGTGGGAATTCTCTCTTGCAGTGCCTCCAT 1872
Query 2184 GACTTTATGAATAAACAAAGTGAATCACAACATAAAGGGTACCATTTTGTGGACTTTTGT 2243
|| | |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct 1873 GAGTCTATGAATAAACAAAGTGAATCACAACTTAAAGGGTACCATTTTGTGGACTTTGGT 1932
Query 2244 TCTGGAGATCCAAATGATGATACGTGTGGTATTTGTGGGGATGGGGGAGATCTAATCTGC 2303
|| || |||||||||||||| || ||||||||||||||||||||||||||||| ||||||
Sbjct 1933 TCGGGGGATCCAAATGATGACACATGTGGTATTTGTGGGGATGGGGGAGATCTTATCTGC 1992
Query 2304 TGTGATGGGTGCCCATCAACATTCCATCAGAGCTGCTTGGACATaaaaaaaTTCCCTTCT 2363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1993 TGTGATGGGTGCCCATCAACATTCCATCAGAGCTGCTTGGACATAAAAAAATTCCCTTCT 2052
Query 2364 GGTGCCTGGTATTGTTGCAACTGCTCATGCAAATTTTGCGAGAAAGTTGAGGCAGCTATA 2423
|||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||| |
Sbjct 2053 GGTGCCTGGTATTGTTACAACTGCTCATGCAAATTTTGCGAGAAAGATGAGGCTGCTAAA 2112
Query 2424 CATGACACTTCAACTCTACACTCCTTATCAAGTTGCCGCCTATGTGAAGAGAAATGCTCT 2483
||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct 2113 CATGAGACTTCAACTCTACCCTCCTTATCGAGTTGCCGCCTATGTGAAGAGAAATGCTCT 2172
Query 2484 AATCATTACCCTCACACTCTTGCAGATCACCAAGCATGCATCAACCAAGATGGCACAGTG 2543
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2173 AAGCATTACCCTCACACTCTTGCAGATCACCAAGCATGCATCAACCAAGATGGCACGGTG 2232
Query 2544 CCTGGTGAAAGGCGTACTGATTCATTTTGTGGAAAGTATTGTCAAGAGTTATTCGAGGAA 2603
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2233 CCTGGTGAAAGGAGTACTGATTCATTTTGTGGAAAGTATTGTCAAGAGTTATTCGAGGAA 2292
Query 2604 CTTCAGTTACTCATTGGAGTAAAACAACCACTGCCTGAGGGCTTTTCCTGGTCATTCCTT 2663
||||||||| |||||||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct 2293 CTTCAGTTATTCATTGGAGTAAAACACCCACTGCCTGAGGGATTTTCATGGTCATTCCTT 2352
Query 2664 CGCCGCTTTGAGCTCCCTAGTGAGGTTGCCGATTGTGACATATCTGAGAGGGTTGCATAT 2723
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 2353 CGCCGCTTTGAGCTCCCTAGTGAGGTTGCCGATTGTGACATATCTGAGAAGATTGCATAT 2412
Query 2724 AATGCCAAAATGGCTGTTGCATTTTCTGTTATGGATGAGTGCTTTTCACCTTTGGTTGAT 2783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2413 AATGCCAAAATGGCTGTTGCATTTTCTGTTATGGATGAGTGCTTTTCACCTTTGGTTGAT 2472
Query 2784 CACAGGAGTGGTGTCAACCTGCTTCAAAACATTGTTTATAATTTTGGGTCGAACTTCCAT 2843
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2473 CACAGGAGTGGAGTCAACCTGCTTCAAAACATTGTTTATAATTTTGGGTCGAACTTCCAT 2532
Query 2844 CGGCTAAATTTCAGCAGTTTTCTCACTGCTGTTTTGGAGAGGGGTGATGAAATCATTGCT 2903
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2533 CGGCTAGATTTCAGCAGTTTTCTCACTGCTGTTTTGGAGAGGGGTGATGAAATCATTGCT 2592
Query 2904 GTGGCGTCTATCAGGATCCACGGCAATCAACTGGCAGAAATGCCGTTTATCGGAACCCGC 2963
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2593 GTGGCGTCTATTAGGATACACGGCAATCAACTGGCAGAAATGCCGTTTATCGGAACCCGC 2652
Query 2964 TATATGTACAGGCGTCAAGGGATGTGTCGTCGACTAATGGATGGCATTGAATCT---G-C 3019
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 2653 TATATGTACAGGCGTCAAGGGATGTGTCGTCGACTAATGGATGGCATTGAATCTTTCGTC 2712
Query 3020 GCTTGGTTCTCTCAAA 3035
|||| ||||||||||
Sbjct 2713 GCTTATTTCTCTCAAA 2728
Score = 843 bits (456), Expect = 0.0
Identities = 548/593 (92%), Gaps = 4/593 (1%)
Strand=Plus/Plus
Query 1134 GGACCTGAATCTGATGGAAAGAAGATGGTACTTAAGCGTGGAAGACCTCCAACACCACAG 1193
|||||||| ||| |||||| || |||||||| ||||||||||||||||||||||||||||
Sbjct 928 GGACCTGAGTCTAATGGAAGGAGGATGGTACGTAAGCGTGGAAGACCTCCAACACCACAG 987
Query 1194 AAAAAGAGGAAATCGGGGATGACAGATGAATCAGATTATAAAGCAAAGAAGAGACTGAAA 1253
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 988 AAAAAGAGGAAATCGGGGATGACAGATGAATCAGATTGGAAAGCAAAGAAGAGACTGAAA 1047
Query 1254 CTTTTTGAGAGTCCCTTAGAGTCACAGGC-CAACAATCCCTTAATTGATGGCGAAAGGAT 1312
|||| ||||||||| |||||||||| ||| ||||||||| |||||||||| |||||||||
Sbjct 1048 CTTTGTGAGAGTCCGTTAGAGTCAC-GGCACAACAATCCTTTAATTGATGACGAAAGGAT 1106
Query 1313 GATTGGGGAGCAACAGAATAAGCAAACTGAAGCTGGAAGACTATCC-AGATCAAAGTCTA 1371
|||||| || |||| || ||||||||||||||||||| ||| || | |||||||||||||
Sbjct 1107 GATTGGCGAACAACGGAGTAAGCAAACTGAAGCTGGAGGAC-ATTCGAGATCAAAGTCTA 1165
Query 1372 AGAAAATGCTGAGTGACCGGATACTGCAGTTACTTCTAGCTGCTGGTTGGACTGTCGAAT 1431
||||||||||||||||| | |||||||||||||||||| |||||||||||||||| ||||
Sbjct 1166 AGAAAATGCTGAGTGACAGAATACTGCAGTTACTTCTAACTGCTGGTTGGACTGTTGAAT 1225
Query 1432 ATAGGCCTCGAAATGGGAGAGCTTATGAAGATGCTGTGTATCTTAATCCTGAGGGAAAGA 1491
|||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 1226 ATAGGCCTCGAAATGGGAGAGCTTATCAAGATGCTGTGTATCTTAATCCAGAGGGAAAGA 1285
Query 1492 CTCACTGGTCAGTGACTAAGGCTTATCAAGTTTACAAAAAACATTTGGAAAGCAGCATGA 1551
|||||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||
Sbjct 1286 CTCACTGGTCAGTGACTAAGGCTTATCAAGTTTATAAAAAACAATTGGAAAGCAACCCGA 1345
Query 1552 ATGATCAAATGAACTCTACCACTGGTTCTGGTTGTGGCTTGCTACCAGAAGAGGACCTTC 1611
||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct 1346 ATGATCAAAAGAACTCTACCACTGGTTCTGGTTTTGGCTTGCTACCAGAAGAAGACCTTC 1405
Query 1612 ACCTATTAGAGAGAAGAATTCAGaaaaaaaGGAGCGATACAGGTAAGCATAGGCCAAAAC 1671
| ||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 1406 ATCTATTAGAGAGAACAATTCAGAAAAAAAGGAGCGATACAGGTAAGCAAAGGTCAAAAT 1465
Query 1672 TGAAGGACAGAGATACTAATGAAAACGTGGTTTCAACAAAGGGAAGGGGAAAA 1724
|||||||||||||||||||||| | | |||||||||||||||||| ||||||
Sbjct 1466 TGAAGGACAGAGATACTAATGACATCTTGGTTTCAACAAAGGGAACAGGAAAA 1518
Score = 841 bits (455), Expect = 0.0
Identities = 843/1015 (83%), Gaps = 88/1015 (9%)
Strand=Plus/Plus
Query 21 ATGTTTGAAACTAAAGAGAAAAAGGGTTTTGATTTAAACGAGTGTGCTTCAATTGAAGAT 80
||||| |||||||| ||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 1 ATGTTAGAAACTAACGAGCAAAAGGGTTTTGATTTAAACGTGTGTGCTTCAATTGAAGAT 60
Query 81 TTCAGTGAATCTGAGCGTGAA-ACTGATAGCTTGGTTGATGATGTGATGGAGAGAACTCC 139
|||||||| ||||| | | || ||| || || ||| | |||| || |
Sbjct 61 TTCAGTGAGTCTGA-CATTAAGGCTG--AG---GG-TGA--AACTGAT----AG---TTT 104
Query 140 GAAAGATGGTAACGTGGAGAATGTAATTGAGATTAAGGATAAGAAAAAAGTGAAGGTTAA 199
| |||||||| ||||||||||| |||||||||||||||||| |||| || | |
Sbjct 105 GGTTGATGGTAATGTGGAGAATGTGATTGAGATTAAGGATAAG--AAAA---AA-G-T-- 155
Query 200 GCCGATTGAGCGTGAAATTCTTATTACGCGGAGGGTTCTTCGCTCAGGCTCTGTGGCAAG 259
|||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 156 ---GATTGAGCGTGAGATTCTCATTACGCGTAGGGTTCTTCGCTCAGGCTCTGTGGCAAG 212
Query 260 GGATCCGGTAAACAGTGATAAACATTGTAAGTCTGTGAAAAAGAAAGGAAAGTGTGCTGA 319
|||| |||||||||||||||||||||||| ||||||||| ||||||||| ||| ||
Sbjct 213 GGATTTAGTAAACAGTGATAAACATTGTAAGGCTGTGAAAAGGAAAGGAAA-TGT--TG- 268
Query 320 TAAGGGTGACAAGATGGGTAAAGTTAGTGGCAGAAGTTCTGTTGATGAGGTTAGAGAAGA 379
| | | | ||| | | | | | |||||||||||||||| | ||||||
Sbjct 269 T-----T-A---G-TGG-T---G---G----A-A-GTTCTGTTGATGAGGTGAAAGAAGA 305
Query 380 AGTGGAACATGAGCAT-TTGAAATCTCCTG-TACCTGAGGAGATTTGTGGAGATGATTTT 437
|||| |||| ||| | || || ||| || |||||||||||||| ||||||||||||||
Sbjct 306 AGTGAAACAGGAGTGTGTT-AAGTCTT-TGGTACCTGAGGAGATTCGTGGAGATGATTTT 363
Query 438 GGAAGTCAAGTTAAACTGGAATCTAAGGATGACAGATCAGATGATGGAAATGGGAGTTTT 497
||||| |||| ||| |||||||||||||||| ||||||||||||||||| ||
Sbjct 364 CGAAGTGAAGTGAAAGTGGAATCTAAGGATGATAGATCAGATGATGGAAA----AG---- 415
Query 498 GAGCCCCATGGAAAAGAAGTGGAAGTTCAACGCAAAAGAGGAAGGCCTCGAAAGTTTGGG 557
| | | | ||| | |||||||| |||||||||||||||||||||||||||
Sbjct 416 -A-----A-G-A---GAA----A-GTTCAACGTAAAAGAGGAAGGCCTCGAAAGTTTGGG 459
Query 558 ATCAGCAGTCAATCTGATGATAACGGGTCAATCTCAAACTGTAAAATTGGGACATCTTTA 617
|| |||||||||||||||||||| |||| ||||||||| |||||| || |||||||||||
Sbjct 460 ATGAGCAGTCAATCTGATGATAATGGGTTAATCTCAAATTGTAAACTTCGGACATCTTTA 519
Query 618 GATAAGGAGGAAGAACTGGTAAGAGATGATAATGATGCGAAACTTATTGGCGGAAGCTGC 677
| |||| || ||||||||||| | |||||||||| || ||||||| |||| |||||||||
Sbjct 520 GGTAAGAAGAAAGAACTGGTAGGCGATGATAATGTTGAGAAACTTGTTGGTGGAAGCTGC 579
Query 678 TTTAACAAGGAGAAAGTAGAAGTAAAACTTGAGCACGGGGAATATGCTGAAGCTAAAGAG 737
|||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||
Sbjct 580 TTTAACAAGGAGAAAGCAGAAGTAAAACTTGAGCATGGGGAATATGCTGAAGATAAAGAG 639
Query 738 ATTCCTGGACCTGATTTTAGGAGCCAGGTTAAGATTGAAACCAAGGATGATGAATGTGGT 797
|||| ||||| |||||||||||| ||||||||| |||||| ||||||||||||||||||
Sbjct 640 ATTCTTGGACTTGATTTTAGGAGTCAGGTTAAGGTTGAAATCAAGGATGATGAATGTGG- 698
Query 798 GGGAGTGTCAAGCCACATGATGAAGAGCTGCAAGTTAAACGTAAACGAGGAAGGCCTAGA 857
| | ||| ||| ||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct 699 G--ATTGTTGAGCTACATGATGAAGAGTTGCAAGTTAAACGTAAACGGGGAAGGCCTAGA 756
Query 858 AAGTTGCAGATCGGCAGTCAATCTGATGAGAATCGCCCTAACACAAACTGTAAACTTGCG 917
||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 757 AAGGTGCAGATCAGCAGTCAATCTGATGAGAGTCGCCCTAACACAAACTGTAAACTTGCG 816
Query 918 AGAACTCCAGAATTAAGCAGCCCGTCGAGTGTTGACAGGATCAGTTTGAGTCGTCGGCGT 977
|||||||||||| |||| |||| ||||||||||||||| || ||||||||||||| ||||
Sbjct 817 AGAACTCCAGAACTAAGTAGCCAGTCGAGTGTTGACAGAATTAGTTTGAGTCGTCTGCGT 876
Query 978 GGTAGACCCTCTAAGACCAAGGAGACGGCGGTTGGCCTTTACATAGAAAA-GGAC 1031
||||||||| | |||||||||||||| ||||| |||||||||| ||||| ||||
Sbjct 877 GGTAGACCCCCAAAGACCAAGGAGACCTCGGTTAGCCTTTACATTGAAAAAGGAC 931
Score = 590 bits (319), Expect = 4e-167
Identities = 439/496 (89%), Gaps = 11/496 (2%)
Strand=Plus/Plus
Query 3231 GTTGATAGCTGTTTGAAGTTAACGAATGTAGAAGAGGGGGATAATGAAACAG-A--GAAT 3287
||||||||||| ||||||||||| |||||||||||||||||||||| | || | |||
Sbjct 3091 GTTGATAGCTGCTTGAAGTTAACTTATGTAGAAGAGGGGGATAATGACAGAGAATCCAAT 3150
Query 3288 CTGAAGTTATTTAACGAGTCCGTGGAGGAGAAAGAAGAGA-TAAGAAAACTGACAGATAT 3346
|| |||||| || ||| ||||||||| ||||||||||| | |||| ||| ||||||||||
Sbjct 3151 CTCAAGTTACTTGACGGGTCCGTGGAAGAGAAAGAAGACACTAAG-AAATTGACAGATAT 3209
Query 3347 AGACATCAATTCCCTTCCCGATGAAGTTGATGATTCCCATGCGTATCAAACTGATATAAA 3406
|||||||||||| ||||| |||||||||||||||||||||||| |||||| ||||| ||
Sbjct 3210 AGACATCAATTCTCTTCCTGATGAAGTTGATGATTCCCATGCGGATCAAAGTGATA-CAA 3268
Query 3407 AAG-GCACGAAAGTGGTGATTTAGAAGATAAGA-AGCCATTATCTGATGATGGCTGTGGA 3464
||| ||| |||| || |||| ||||||||||| | || ||||||||||||||||||| |
Sbjct 3269 AAGAGCAGGAAATTGATGATAAAGAAGATAAGACA-CCGTTATCTGATGATGGCTGTGAA 3327
Query 3465 GGTAAAGCTGAGGGTACTGAGGTGTCAGATCAACAACCCGATTGTAAC-ATGATAGATCA 3523
||||||||||||||||| ||| |||| |||||||||| ||| ||||| | | ||||| |
Sbjct 3328 GGTAAAGCTGAGGGTACCAAGGAGTCAAATCAACAACCGGATAGTAACAAAG-TAGATAA 3386
Query 3524 TTCCCAGCCACTTGGTAATGGTGGTACAGGGGAAGAGATTGACAACAAAAACTTAACGCT 3583
|| ||||||||||||||||||||||||||||||||| ||| ||||| || |||| ||||
Sbjct 3387 CTCTCAGCCACTTGGTAATGGTGGTACAGGGGAAGAGCTTGGCAACAGAACCTTAGCGCT 3446
Query 3584 AAAGAGAGAAGTGACTACCACATTGCGAGCATCACCCCGACTGATTCAAAGATCGTGGAG 3643
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3447 AAAGAGAGAAGTGACTCCCACATTGCGAGCATCGCCCCGACTGATTCAAAGATCGTGGAG 3506
Query 3644 AACATCGCGGGTGAACCAGAAGTACACAGGTACTACTAATGCCGTATTGCTTGACTCTCC 3703
|||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||||||
Sbjct 3507 AACATCACGGGTGAACCAGAAGTTCACAGGTACTACTAACGCCGTACTGCTTGACTCTCC 3566
Query 3704 ACACCGGTGTGTCTGA 3719
||||||||||||||||
Sbjct 3567 ACACCGGTGTGTCTGA 3582
Score = 207 bits (112), Expect = 5e-52
Identities = 144/159 (91%), Gaps = 3/159 (2%)
Strand=Plus/Plus
Query 3087 TCAGGCTTTGGCTTCACGCCTGTTAATGAATCAGAGaaaaaaaGAATTAAGAATCTGAAC 3146
||||||||||||||| | ||||| ||||| || |||||||||| ||||||||||||||||
Sbjct 2818 TCAGGCTTTGGCTTCGCACCTGTCAATGATTCTGAGAAAAAAACAATTAAGAATCTGAAC 2877
Query 3147 TTGTTGGTGTTCCCTGGTGTAGACATGTTGGGGAAATCATTGGTGAAGGAGAAGATCACT 3206
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2878 TTGTTGGTGTTCCCTGGCGTAGACATGTTGGGGAAATCATTGGTGAAGGAGAAGATCACT 2937
Query 3207 GACTCAATTGTGTCCTCTTCCAATG-TTGA-TAGCTGTT 3243
|||||| |||| || ||| |||||| || | | ||||||
Sbjct 2938 GACTCAGTTGTTTCATCTCCCAATGGTTTAGT-GCTGTT 2975
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 186420360188
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5