BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg947373 Length=480 Score E Sequences producing significant alignments: (Bits) Value AT3G44070.1 | Symbols: | Glycosyl hydrolase family 35 protein ... 158 6e-38 AT3G43580.1 | Symbols: | Beta-galactosidase related protein | ... 63.9 1e-09 > AT3G44070.1 | Symbols: | Glycosyl hydrolase family 35 protein | chr3:15828177-15829088 REVERSE LENGTH=831 Length=831 Score = 158 bits (85), Expect = 6e-38 Identities = 195/247 (79%), Gaps = 12/247 (5%) Strand=Plus/Plus Query 172 TTGCTCGAAACCTTGTCAAAGCACTACCTCGTGTAGTTC-TTCTCGTGCCGGCGAGAATC 230 |||||||| |||||||||||||||||||||||||||| || | |||||| |||| || Sbjct 479 TTGCTCGAGCCCTTGTCAAAGCACTACCTCGTGTAGTTTGTT-TGGTGCCGCCGAGTTTC 537 Query 231 TCGACTTTGGTCCATCCACCAACGCCACTTCGTCTCTTGATAGTGGCTAATTTTTTCT-C 289 || ||||| || | |||||||||||||||||||||||| | || | |||| || || | Sbjct 538 ACGTCTTTGACCCTTACACCAACGCCACTTCGTCTCTTGACAATGACGAATTGTT-CTTC 596 Query 290 CGTTGACTCGCTCTTGGAAGACTCATCAATTAT-TTTTGATCTCACATGTACCAA-AATG 347 | |||| | |||||||||||| | || ||| | |||||||||||| || ||||| || Sbjct 597 CTTTGATTTGCTCTTGGAAGATTTGTCGATT-TCTTTTGATCTCACTTGCACCAACAAA- 654 Query 348 CTT-CATAACTTTTGGCTCAAAACTCTTAAGAAGTT-ATTATCGATTAACTTTATCTATC 405 || | || ||||||| ||||| | || ||| | || || |||||||||| |||||||| Sbjct 655 -TTACCTAGCTTTTGGTTCAAAGCCCTCAAGGATTTGAT-ATCGATTAACCCTATCTATC 712 Query 406 TTTTTAT 412 ||||| Sbjct 713 CCTTTAT 719 > AT3G43580.1 | Symbols: | Beta-galactosidase related protein | chr3:15502143-15503606 FORWARD LENGTH=1464 Length=1464 Score = 63.9 bits (34), Expect = 1e-09 Identities = 46/52 (88%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 12 AACGGCATTATGATCCCGCATCCAAGGAGCGGTGATTACCGAAGCTTCTTCA 63 |||| |||||| ||||| || ||||||||||||||||||||||||||||| Sbjct 904 AACGACATTATCATCCCATTTCTAAGGAGCGGTGATTACCGAAGCTTCTTCA 955 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22856536885 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5