BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg947402
Length=1414
Score E
Sequences producing significant alignments: (Bits) Value
AT5G37530.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 2285 0.0
> AT5G37530.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr5:14906489-14909177 FORWARD LENGTH=1547
Length=1547
Score = 2285 bits (1237), Expect = 0.0
Identities = 1340/1390 (96%), Gaps = 5/1390 (0%)
Strand=Plus/Plus
Query 6 GAGTAATTAAACGGTAATGGAGGAGAAATTAAAGTATCTGAGTCTCGTCGGAGCCGGAGC 65
||| ||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct 1 GAGAAATCAAACGGTAATGGAGGAGAAATCAAAGTATCTAAGTCTCGTCGGAGCCGGAGC 60
Query 66 T-TTAATCGGATCCATCTCCACCGTCGCTCTCCTTAAACTTCTCTCCAGGACTTCACTGA 124
| || |||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 61 TCTT-ATCGGATCCATCTCCACCGTCGCTCTCCTTAAACTTCTCTCCAGGAGTTCATTGA 119
Query 125 AGCAGCTTAAAGAAAACCCAGAAACTAATTTCTT---AGGAAATGGTATTGAATCTGAAA 181
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 120 AGCAGCTTAATGAAAACCCAGAAACTAATTTCTTAGCAGGAAATGGTATTGAATCTGAAA 179
Query 182 CAAGACCAGTTACTGTAGCAGTTGGTCAGGATCTTTTGAAAGATGAAATTGTTTCTGAAC 241
||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct 180 CAAGACCAGATACTGTAGCAAATGGTCAAGATCTTTTGAAAGATGAAATTGTTTCTGAAC 239
Query 242 ATTTAACTAGGAATATCCAGTTTTTCGGTCTTGAGTCGCAGCGTAAAGTAACTGGATCAT 301
||||||| |||||||| ||||||||||||||||| ||||||| |||||||||||||||||
Sbjct 240 ATTTAACCAGGAATATACAGTTTTTCGGTCTTGAATCGCAGCATAAAGTAACTGGATCAT 299
Query 302 ATGTTGTGGTTATTGGACTTGGAGGTGTAGGGAGTCATGCTGCATCTATGCTCTTGAGGT 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 ATGTTGTGGTTATTGGACTTGGAGGTGTAGGGAGTCATGCTGCATCTATGCTCTTGAGGT 359
Query 362 CAGGTGTTGGCAAGCTTCTCCTTGTTGACTTTGATCAGGTGTCACTATCATCATTAAATC 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 CAGGTGTTGGCAAGCTTCTCCTTGTTGACTTTGATCAGGTGTCACTATCATCATTAAATC 419
Query 422 GACACGCTGTTGCAACACGAGCAGATGTTGGTATTCCGAAAGCTATATGTCTCAAGAAGC 481
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 420 GACACGCTGTTGCAACACGAGCAGATGTTGGTATTCCGAAAGCTATGTGTCTCAAGAAGC 479
Query 482 ATTTCTCTTCAATCTTTCCTGAATGCCGTATAGAAGCCAAGGTGATGCTGTATGACTCAT 541
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 480 ATTTCTCTTCAATCTTTCCTGAATGCCATATAGAAGCCAAGGTGATGCTGTATGACTCAT 539
Query 542 CATCTGAAGAAGAAATTCTTTCAGGCAACCCAGGTTTTGTTCTGGACTGCATTGACAACA 601
|||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||
Sbjct 540 CATCTGAAGAAGAAATTCTTTCAGGCAAGCCAGATTTCGTTCTGGACTGCATTGACAACA 599
Query 602 TCGATACAAAGGTGGGACTTTTGGCTGCATGCGTTAAGAGGGGTTTGAAAGTTCTGAGTG 661
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 600 TCGATACAAAGGTGGGACTTTTGGCTGCATGTGTTAAGAGGGGTTTGAAAGTTCTGAGTG 659
Query 662 CAACTGGTGCAGGTGCTAGAGCTGACCCAACAAGAATCAGAGTGGCTGATATAAGAGAGT 721
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 CAACTGGTGCTGGGGCTAGAGCTGACCCAACAAGAATCAGAGTGGCTGATATAAGAGAGT 719
Query 722 CAACAATTGACCCATTATCTCGATCTGTAAGACACAGATTAAGGAGAGAACACGGCATTG 781
||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 720 CAACAATTGACCCGTTATCTCGATCTGTAAGACACAGATTGAGGAGAAAACACGGCATTG 779
Query 782 AAGGAGGCATTCCTGTTGTGTTTTCCCTGGAAAAACCAAAAGCAAAGCTGCTTCCATTTA 841
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 780 AAGGAGGCATTCCTGTTGTATTTTCCCTGGAAAAACCAAAAGCAAAGCTGCTTCCCTTTG 839
Query 842 AGGGGCCAAATGGGGAAGACGAGAATCCTTCAGATTATCAAGTAGTTCCTGGCTTTCGTG 901
||||| ||||||| |||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct 840 AGGGGACAAATGGAGAAGACGAGAATCCTTTAGATTATCAAGTTGTTCCTGGCTTTCGTG 899
Query 902 TTCGGATAATTCCTGTTCTCGGAACCATCCCGGCTATTTTTGGACAAATCATGGCCTCCT 961
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 900 TTCGGATAATTCCTGTTCTCGGAACCATCCCGGCTATATTTGGACAAATTATGGCCTCCT 959
Query 962 ATGTTATAACACAACTTGCAGGTGTGCAAGTTCAGATGGAGCCAATAGTGAATCTAGATT 1021
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 960 ATGTTATAACACAACTTGCAGGTGTGCAAGTTCAGATGGAGCCTATAGTGAATCTAGATT 1019
Query 1022 TGGATCATTACCGATTGCTTCATCAACGCCTTATTGAGCATGAGGAGACAGTTTATGGCA 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020 TGGATCATTACCGATTGCTTCATCAACGCCTTATTGAGCATGAGGAGACAGTTTATGGCA 1079
Query 1082 CATCTGCAGAAGTCGAGGTGGATGTTGAGGAAGTGATGTACATAGTGAAAGAGTTGTGGC 1141
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 CATCTGCTGAAGTCGAGGTGGATGTTGAGGAAGTGATGTACATAGTGAAAGAGTTGTGGC 1139
Query 1142 ACGGACGAAGTGCTAGAGATGAGACTGCAAAAGATGTTGGCAGAGGGATGTGGCGAGCCA 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 ACGGACGAAGTGCTAGAGATGAGACTGCAAAAGATGTTGGCAGAGGGATGTGGCGAGCCA 1199
Query 1202 TGAATGAGTTGATGCTCATAAGATGGGATGCAAAGAAGCCAGCAACAGTCTCGAACTTGA 1261
||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1200 TGAATGAGTTGATGCTCGTAAGATGGGATGCAAAAAAGCCAGCAACAGTCTCAAACTTGG 1259
Query 1262 TTCTTTTGAAGTTTAAAGAGGCGGATGAACACGAGGCTAAGACTCTTGAGGAAGTGAAGG 1321
||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 1260 TTCTTTTGAAGTTCAAAGAGGCGGATGAACATGAGACTAAGACTCTTGAGGAAGTGAAGG 1319
Query 1322 AAAGTGAAACAGAGTTCTTTGAAAGAGTTTCATGCATACTGAAGAAGGCAGAGCTTGATT 1381
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1320 AAAGTGAAACAGAGTTCTTTGAAAGAGTTTCATGCGTACTGAAGAAGGCAGAGCTTGATT 1379
Query 1382 TCTACGGCTA 1391
||||||||||
Sbjct 1380 TCTACGGCTA 1389
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 69678356460
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5