BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg947503 Length=311 Score E Sequences producing significant alignments: (Bits) Value AT5G42000.1 | Symbols: | ORMDL family protein | chr5:16799354-... 481 2e-135 > AT5G42000.1 | Symbols: | ORMDL family protein | chr5:16799354-16801028 FORWARD LENGTH=913 Length=913 Score = 481 bits (260), Expect = 2e-135 Identities = 297/313 (95%), Gaps = 9/313 (3%) Strand=Plus/Plus Query 1 ATGCGAATCA-AGTATTTGGAATGTGGAATCCAACAACAAATG-C--CATCGTCATTCAA 56 |||||||||| |||||||||||||||||||||||||||||||| | |||| |||||||| Sbjct 604 ATGCGAATCAGAGTATTTGGAATGTGGAATCCAACAACAAATGCCATCATCATCATTCAA 663 Query 57 CTTGTCTGTACTATACAGACATCGAATCCC--AACCGGAGaaaaaaaTGTGTTATTTGGT 114 | |||||||||||||||||||| ||||||| |||||||| ||||||||||||||||| Sbjct 664 CATGTCTGTACTATACAGACATTGAATCCCTTAACCGGAG---AAAATGTGTTATTTGGT 720 Query 115 CACATCCCATCATCGCTTATTCAAACCTTTCTACTCTTTGTTTGGGGCTTCTAATCAATT 174 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 CACATCCCATCATCGCATATTCAAACCTTTCTACTCTTTGTTTGGGGCTTCTAATCAATT 780 Query 175 CATATTTGATATCTTATGTGGTTGTCTTAGTTTCTTATTTGTATAATCCCAAAACTGGTT 234 |||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 781 CATATTTGATCTCTTTTGTGGTTCTCTTAGTTTCTTATTTGTATAATCCCAAAACTGGTT 840 Query 235 ACAACAGAAAGTTGTTTAGCGAGCAATCTAGGGTTTGAATGAATAGTTGGGGAAGATTTA 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 ACAACAGAAAGTTGTTTAGCGAGCAATCTAGGGTTTGAATGAATAGTTGGGGAAGATTTA 900 Query 295 TTTATATATACCG 307 ||||||||||||| Sbjct 901 TTTATATATACCG 913 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14426843963 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5