BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg947553

Length=581
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G19440.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfam...   830    0.0  


> AT5G19440.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily 
protein | chr5:6556420-6558342 FORWARD LENGTH=1273
Length=1273

 Score =  830 bits (449),  Expect = 0.0
 Identities = 489/509 (96%), Gaps = 0/509 (0%)
 Strand=Plus/Plus

Query  47   GTGATCCGAGAAAGACACAACACTTAGTTTCACTGGAAGGTGCAAAGGAAAGACTTCACT  106
            ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct  198  GTGATCCGAAAAAGACACAACACTTAGTTTCACTAGAAGGTGCAAAGGAAAGACTTCACT  257

Query  107  TGTTCAAAGCAGACCTTTTGGAACAAGGTTCTTTCGACTCTGCTATTGATGGCTGCCATG  166
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct  258  TGTTCAAAGCAGACCTTTTGGAACAAGGTTCTTTCGACTCTGCTATTGATGGTTGCCATG  317

Query  167  GAGTTTTCCACACTGCTTCTCCATTTTTTCACGATGTCAAAGACCCACAGGCTGAACTTA  226
            ||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||
Sbjct  318  GAGTTTTCCACACTGCTTCTCCATTTTTTAATGATGCCAAAGACCCACAGGCTGAACTTA  377

Query  227  TCGATCCTGCGGTCAAGGGGACACTTAACGTTTTGAATTCTTGCACCAAAGCTTCTTCGG  286
            | |||||||||||||||||||| ||||||||||||||||| ||| ||||||| |||||||
Sbjct  378  TTGATCCTGCGGTCAAGGGGACGCTTAACGTTTTGAATTCGTGCGCCAAAGCCTCTTCGG  437

Query  287  TTAAAAGGGTTGTTGTAACCTCCTCCATGGCAGCCGTTGGTTACAATAGAAAACCATGCA  346
            |||| |||||||||||||||||||||||||| ||||||||||||||| |||||||| |||
Sbjct  438  TTAAGAGGGTTGTTGTAACCTCCTCCATGGCTGCCGTTGGTTACAATGGAAAACCACGCA  497

Query  347  CACCTGATGTTACCGTCGATGAAACTTGGTTCTCTGATCCTGAGCTTTGCGAGTCCTCCA  406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct  498  CACCTGATGTTACCGTCGATGAAACTTGGTTCTCTGATCCTGAGCTTTGCGAGGCCTCCA  557

Query  407  AGATGTGGTATGTTCTATCCAAAACTTTGGCGGAAGATGCCGCTTGGAAACTCGCTAAAG  466
            |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct  558  AGATGTGGTATGTTCTATCCAAGACTTTGGCGGAAGATGCAGCTTGGAAACTCGCTAAAG  617

Query  467  AGAAAGGCTTAGACATTGTTACTATTAACCCGACTATGGTGATCGGTCCTCTCCTACAAC  526
            |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct  618  AGAAAGGCTTAGACATTGTTACTATTAACCCGGCTATGGTGATCGGTCCTCTCCTACAGC  677

Query  527  CAACTCTGAACACGAGTGCTGCTGCTATA  555
            |||||||||||||||||||||||||||||
Sbjct  678  CAACTCTGAACACGAGTGCTGCTGCTATA  706



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 27930185732


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5