BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg947576

Length=324
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G34060.1 | Symbols: DML3 | demeter-like protein 3 | chr4:163...  86.1    2e-16


> AT4G34060.1 | Symbols: DML3 | demeter-like protein 3 | chr4:16314003-16319426 
FORWARD LENGTH=3308
Length=3308

 Score = 86.1 bits (46),  Expect = 2e-16
 Identities = 58/64 (91%), Gaps = 0/64 (0%)
 Strand=Plus/Plus

Query  42    AATGGAACATACTTCCAAACCAATGAGGTTTTTGCTGATCATGACTCTAGCATCAACCCA  101
             ||||||||||||||||||||||||||||||||||||||||||||  | ||| | ||||| 
Sbjct  2837  AATGGAACATACTTCCAAACCAATGAGGTTTTTGCTGATCATGAGACAAGCTTAAACCCC  2896

Query  102   ATTG  105
             ||||
Sbjct  2897  ATTG  2900



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 15080324700


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5