BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg947599
Length=778
Score E
Sequences producing significant alignments: (Bits) Value
AT5G41210.1 | Symbols: ATGSTT1, GST10, GSTT1 | glutathione S-tr... 1192 0.0
AT5G41220.1 | Symbols: ATGSTT3, GST10C, GSTT3 | glutathione S-t... 1031 0.0
AT5G41240.1 | Symbols: ATGSTT2, GST10B, GSTT2 | glutathione S-t... 1014 0.0
> AT5G41210.1 | Symbols: ATGSTT1, GST10, GSTT1 | glutathione S-transferase
THETA 1 | chr5:16492320-16493994 REVERSE LENGTH=1078
Length=1078
Score = 1192 bits (645), Expect = 0.0
Identities = 727/768 (95%), Gaps = 0/768 (0%)
Strand=Plus/Plus
Query 7 AGACGAAGAAGAAGATGATGAAGCTCAAAGTGTATGCAGATCGGATGTCACAGCCATCTC 66
||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 97 AGACGAAAAAGAAGATGATGAAGCTCAAAGTGTATGCAGATCGAATGTCACAGCCATCAC 156
Query 67 GTGCTGTTATCATATTCTGCAAGGTTAATGGAATCCAATTCGATGAGGTTTTGATATCCT 126
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 157 GTGCTGTTATCATATTCTGCAAGGTTAATGGAATCCAATTCGATGAGGTCTTGATTTCCT 216
Query 127 TGGCGAAGCGTCAACAATTATCTCCTGAATTCAAAGATATTAACCCATTGGGGAAAGTTC 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 217 TGGCGAAGCGTCAACAATTATCTCCTGAATTCAAAGATATTAACCCATTGGGGAAAGTTC 276
Query 187 CAGCTATTGTTGATGGCAGACTTAAGCTCTTCGAGAGTCACGCTATCTTGATATATCTTT 246
||||||||||||||||||| ||||||||||| ||||||||||| ||| |||||||||| |
Sbjct 277 CAGCTATTGTTGATGGCAGGCTTAAGCTCTTTGAGAGTCACGCAATCCTGATATATCTAT 336
Query 247 CCTCTGCATTCCCAAGTGTAGCTGATCATTGGTACCCGAATGATCTTTCCAAAAGAGCCA 306
|||| || || |||||||| |||||||||||||| || |||||||| |||||||||||||
Sbjct 337 CCTCGGCGTTTCCAAGTGTTGCTGATCATTGGTATCCAAATGATCTATCCAAAAGAGCCA 396
Query 307 AGATCCACTCAGTTATGGATTGGCATCACACTAATTTACGTCCTGGTGCAGCTGGATATG 366
|||| ||||||||| |||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 397 AGATTCACTCAGTTTTGGATTGGCATCACACCAATTTACGTCGTGGTGCAGCTGGATATG 456
Query 367 TTCTGAATAGTGTACTAGCTCCAGCTCTCGGTCTTCCTCTGAATCCAAAAGCAGCTGCTG 426
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct 457 TTCTGAATAGTGTACTAGGTCCAGCTCTCGGTCTTCCTCTGAATCCGAAAGCAGCTGCTG 516
Query 427 AAGCTGAGAAGTTACTAACAAAGTCTCTGTCCACTCTAGAGACTTTTTGGCTTAAGGGAA 486
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 517 AAGCTGAGCAGTTACTAACAAAGTCTCTGTCCACTCTAGAGACTTTTTGGCTTAAGGGCA 576
Query 487 ATGCCAAGTTCTTGCTCGGTAGCAACCAACCATCTATAGCTGATCTGAGCCTTGTATGCG 546
|||| || ||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 577 ATGCTAAATTCTTGCTCGGAAGCAACCAACCATCTATAGCTGATCTCAGCCTTGTATGCG 636
Query 547 AACTTATGCAGCTGCAGGTTTTGGATGACAAAGATCGTCTTAGATTGCTCAGCCCTCATA 606
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 637 AACTTATGCAGCTGCAGGTTTTGGATGACAAAGATCGTCTTAGATTGCTCAGCACTCATA 696
Query 607 AGAAAGTAGAACAATGGATTGAGAATACGAGAAAGGCAACAATGCCACACTTTGATGAGA 666
||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||||||||
Sbjct 697 AGAAAGTTGAACAATGGATTGAGAATACGAAAAAAGCAACAATGCCTCACTTTGATGAGA 756
Query 667 CCCATGAGATCCTTTTCAAAGCCAAACAAGGATTCCAGAAGCAGCGAGAGATGGGAACCG 726
||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||
Sbjct 757 CCCATGAGATCCTTTTCAAAGTCAAAGAAGGATTCCAGAAGCGGCGAGAGATGGGAACCT 816
Query 727 TATCTAAACCGGGTCTTCAATCTAAGATGTAACAACTTAGAACAAAAC 774
|||||||||||||||||||||| ||||| ||| |||||||||||||||
Sbjct 817 TATCTAAACCGGGTCTTCAATCCAAGATCTAAGAACTTAGAACAAAAC 864
> AT5G41220.1 | Symbols: ATGSTT3, GST10C, GSTT3 | glutathione S-transferase
THETA 3 | chr5:16494426-16497068 REVERSE LENGTH=2006
Length=2006
Score = 1031 bits (558), Expect = 0.0
Identities = 685/746 (92%), Gaps = 10/746 (1%)
Strand=Plus/Plus
Query 14 GAAGAAGATGATGAAGCTCAAAGTGTATGCAGATCGGATGTCACAGCCATCTCGTGCTGT 73
|||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 90 GAAGAAGAAGATGAAGCTCAAAGTGTATGCGGATCGAATGTCACAGCCATCTCGTGCTGT 149
Query 74 TATCATATTCTGCAAGGTTAATGGAATCCAATTCGATGAGGTTTTGATATCCTTGGCGAA 133
||||||||||||||||||||| |||||||||||||||| | ||||| | |||||||||
Sbjct 150 CCTCATATTCTGCAAGGTTAATGAAATCCAATTCGATGAGATATTGATTTACTTGGCGAA 209
Query 134 GCGTCAACAATTATCTCCTGAATTCAAAGATATTAACCCATTGGGGAAAGTTCCAGCTAT 193
|||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||
Sbjct 210 TCGTCAACAATTATCCCCTGAATTTAAAGATATTAACCCAATGGGGAAAGTTCCAGCTAT 269
Query 194 TGTTGATGGCAGACTTAAGCTCTTC-GAGAGTCACGCTATCTTGATATATCTTTCCTCTG 252
||||||||||| |||||||||| || |||||||||||||||||||||||||||||||| |
Sbjct 270 TGTTGATGGCAAACTTAAGCTC-TCTGAGAGTCACGCTATCTTGATATATCTTTCCTCAG 328
Query 253 CATTCCCAAGTGTAGCTGATCATTGGTACCCGAATGATCTTTCCAAAAGAGCCAAG-ATC 311
||| ||||||||||| ||||||||||||||||| ||||||||||||||| ||| || ||
Sbjct 329 CATACCCAAGTGTAGTTGATCATTGGTACCCGACTGATCTTTCCAAAAGGGCC-AGAATT 387
Query 312 CACTCAGTTATGGATTGGCATCACACTAATTTACGTCCTGGTGCAGCTGGATATGTTCTG 371
||||| ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||
Sbjct 388 CACTCTGTTTTGGATTGGCATCACACCAATTTACGCCCTGGTGCAGCTGGATACGTTCTG 447
Query 372 AATAGTGTACTAGCTCCAGCTCTCGGTCTTCCTCTGAATCCAAAAGCAGCTGCTGAAGCT 431
||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 448 AATAGTGTACTAGGTCCAGCTCTCGGTCTTCCTCTGAATCCGAAAGCAGCTGCTGAAGCT 507
Query 432 GAGAAGTTACTAACAAAGTCTCTGTCCACTCTAGAGACTTTTTGGCTTAAGGGAAATGCC 491
||| |||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||
Sbjct 508 GAGCAGTTACTAACAAAGTCTCTGACCACTCTAGACACTTTTTGGCTTAAGGGCAATGCC 567
Query 492 AAGTTCTTGCTCGGTAGCAACCAACCATCTATAGCTGATCTGAGCCTTGTATGCGAACTT 551
| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 568 ATGTTCTTGCTCGGAAGCAACCAACCATCTATAGCTGATCTGAGCCTTGTATGTGAACTA 627
Query 552 ATGCAGCTGCAGGTTTTGGATGACAAAGATCGTCTTAGATTGCTCAGCCCTCATAAGAAA 611
| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 628 ACGCAGCTGCAGGTTTTGGATGATAAAGATCGTCTTAGATTGCTCAGCCCTCATAA-AAA 686
Query 612 -GTAGAACAATGGATTGAGAATACGAGAAAGGCAACAATGCCACACTTTGATGAGACCCA 670
|| |||||||||||||||||||||||||| || || ||||| |||||||||||| |||
Sbjct 687 TGTTGAACAATGGATTGAGAATACGAGAAAAGCGACGATGCCTCACTTTGATGAGGTCCA 746
Query 671 TGAGATCCTTTTCAAAGCCAAACA-AGGAT-TCCAGAAGCAGCGAGAGATGGGAACCGTA 728
|||| ||||||||| ||||||| | || || || |||||||||||||||||| ||||| |
Sbjct 747 TGAGGTCCTTTTCAGAGCCAAAGATAG-ATGTC-AGAAGCAGCGAGAGATGGCAACCGCA 804
Query 729 TCTAAACCGGGTCTTCAATCTAAGAT 754
||||||||||||| ||||||||||||
Sbjct 805 TCTAAACCGGGTCCTCAATCTAAGAT 830
> AT5G41240.1 | Symbols: ATGSTT2, GST10B, GSTT2 | glutathione S-transferase
THETA 2 | chr5:16498155-16500858 REVERSE LENGTH=1961
Length=1961
Score = 1014 bits (549), Expect = 0.0
Identities = 678/742 (91%), Gaps = 2/742 (0%)
Strand=Plus/Plus
Query 14 GAAGAAGATGATGAAGCTCAAAGTGTATGCAGATCGGATGTCACAGCCATCTCGTGCTGT 73
|||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 38 GAAGAAGAAGATGAAGCTCAAAGTGTATGCGGATAGGATGTCACAGCCATCTCGTGCTGT 97
Query 74 TATCATATTCTGCAAGGTTAATGGAATCCAATTCGATGAGGTTTTGATATCCTTGGCGAA 133
||||||||||||||||||| | |||||||||||| ||| ||||||| ||||||| |||
Sbjct 98 CCTCATATTCTGCAAGGTTAACGAAATCCAATTCGACGAGATTTTGATTTCCTTGGGGAA 157
Query 134 GCGTCAACAATTATCTCCTGAATTCAAAGATATTAACCCATTGGGGAAAGTTCCAGCTAT 193
|||||||| ||||| |||||||||||||| ||||||||| |||||||||||||||||||
Sbjct 158 ACGTCAACAGTTATCCCCTGAATTCAAAGAAATTAACCCAATGGGGAAAGTTCCAGCTAT 217
Query 194 TGTTGATGGCAGACTTAAGCTCTTCGAGAGTCACGCTATCTTGATATATCTTTCCTCTGC 253
||||||||||||||||||||| || |||||||||||||| ||||||||||||||||| ||
Sbjct 218 TGTTGATGGCAGACTTAAGCTATTTGAGAGTCACGCTATATTGATATATCTTTCCTCAGC 277
Query 254 ATTCCCAAGTGTAGCTGATCATTGGTACCCGAATGATCTTTCCAAAAGAGCCAAGATCCA 313
|| | ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 278 ATACGCAAGTGTAGTTGATCATTGGTACCCGAATGATCTTTCCAAAAGAGCCAAGATTCA 337
Query 314 CTCAGTTATGGATTGGCATCACACTAATTTACGTCCTGGTGCAGCTGGATATGTTCTGAA 373
||| ||| |||||||||||||||| |||||||| ||||||||| ||||||||||||||||
Sbjct 338 CTCCGTTTTGGATTGGCATCACACCAATTTACGCCCTGGTGCATCTGGATATGTTCTGAA 397
Query 374 TAGTGTACTAGCTCCAGCTCTCGGTCTTCCTCTGAATCCAAAAGCAGCTGCTGAAGCTGA 433
||| || |||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct 398 TAGCGTTCTAGCTCCAGCTCTTGGTCTTCCACTGAATCCGAAAGCAGCTGCTGAAGCTGA 457
Query 434 GAAGTTACTAACAAAGTCTCTGTCCACTCTAGAGACTTTTTGGCTTAAGGGAAATGCCAA 493
||| |||||||||| ||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 458 GAACATACTAACAAACTCTCTGTCCACTCTAGAGACTTTTTGGCTTAAGGGCAGTGCCAA 517
Query 494 GTTCTTGCTCGGTAGCAACCAACCATCTATAGCTGATCTGAGCCTTGTATGCGAACTTAT 553
||| || ||||| |||| |||||||||||||||||||| ||||||||||| ||||||||
Sbjct 518 GTTTTTACTCGGGGGCAAGCAACCATCTATAGCTGATCTCAGCCTTGTATGTGAACTTAT 577
Query 554 GCAGCTGCAGGTTTTGGATGACAAAGATCGTCTTAGATTGCTCAGCCCTCATAAGAAAGT 613
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 578 GCAGCTGCAGGTTTTGGATGACAAAGATCGTCTTAGATTGCTTAGCCCTCATAAGAAAGT 637
Query 614 AGAACAATGGATTGAGAATACGAGAAAGGCAACAATGCCACACTTTGATGAGACCCATGA 673
|||||||||||||||| ||||||||| || |||||||| |||| ||||||| ||||||
Sbjct 638 TGAACAATGGATTGAGAGTACGAGAAAAGCGACAATGCCTCACTCTGATGAGGTCCATGA 697
Query 674 GATCCTTTTCAAAGCCAAACA-AGGATTCCAGAAGCAGCGAGAGATGGGAACCGTATCTA 732
| ||||||||| ||||||| | || ||| ||||||||||||||||||| ||||| |||||
Sbjct 698 GGTCCTTTTCAGAGCCAAAGATAG-ATTTCAGAAGCAGCGAGAGATGGCAACCGCATCTA 756
Query 733 AACCGGGTCTTCAATCTAAGAT 754
||||||||| ||||||||||||
Sbjct 757 AACCGGGTCCTCAATCTAAGAT 778
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 37826312691
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5