BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg947665
Length=1588
Score E
Sequences producing significant alignments: (Bits) Value
AT5G40760.1 | Symbols: G6PD6 | glucose-6-phosphate dehydrogenas... 2643 0.0
AT3G27300.1 | Symbols: G6PD5 | glucose-6-phosphate dehydrogenas... 1646 0.0
> AT5G40760.1 | Symbols: G6PD6 | glucose-6-phosphate dehydrogenase
6 | chr5:16310748-16314774 FORWARD LENGTH=1959
Length=1959
Score = 2643 bits (1431), Expect = 0.0
Identities = 1531/1580 (97%), Gaps = 3/1580 (0%)
Strand=Plus/Plus
Query 7 AGGTTTTATAGAAGATGGGATCTGGTCAATGGCACGTTGAGAAAAGGTCTACTTTTAGGA 66
|||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 181 AGGTTTTA-AGGAGATGGGATCTGGTCAATGGCACGTTGAGAAAAGGTCTACGTTTAGGA 239
Query 67 ATGATTCGTTTGTAAGAGAATATGGTACAGTTCCAGAAACTGGTTGTCTTTCAATCATAG 126
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 240 ATGATTCGTTTGTGAGAGAATATGGTATAGTTCCAGAAACTGGTTGTCTTTCAATCATAG 299
Query 127 TTCTTGGTGCTTCTGGTGATCTTGCTAAGAAGAAGACTTTTCCTGCTCTTTTTAACCTAT 186
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 300 TTCTTGGTGCTTCTGGTGATCTTGCTAAGAAGAAGACTTTTCCTGCTCTTTTTAACTTAT 359
Query 187 ACCGTCAGGGGTTTCTCAATCCAGATGAAGTTCATATTTTCGGGTATGCGCGGACTAAGA 246
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 360 ACCGTCAGGGATTTCTCAATCCAGATGAAGTTCATATTTTCGGGTATGCGAGGACTAAGA 419
Query 247 TTTCTGATGAAGAACTGAGAGATCGGATTCGTGGATATCTTGTTGATGAGAAGAATGCTG 306
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 420 TTTCTGATGAAGAGCTGAGAGATAGGATTCGTGGATATCTTGTTGATGAGAAGAATGCTG 479
Query 307 AGCAAGCTGAAGCTTTGTCAAAGTTTCTACAGCTGATTAAGTATGTGAGTGGCCCTTATG 366
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 480 AGCAAGCTGAAGCTTTGTCAAAGTTTCTGCAGCTGATTAAGTATGTGAGTGGCCCTTATG 539
Query 367 ATTCTGAGGAGGGGTTCCAGAGATTAGACAATGCAATTTCAGAGCACGAAATCTCCAAAA 426
|| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 540 ATGCTGAGGAGGGGTTCCAGAGATTAGACAAGGCAATTTCAGAGCACGAAATCTCCAAAA 599
Query 427 ATAGTACTGAAGGGTCTTCTAGGAGACTGTTTTACCTTGCACTTCCACCGTCTGTTTATC 486
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 600 ATAGTACTGAAGGGTCTTCTAGAAGACTGTTTTATCTTGCACTTCCACCGTCTGTTTATC 659
Query 487 CTTCTGTATGCAAGATGATCAAGACGTGCTGCATGAACAAATCTGATCTTGGTGGATGGA 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 CTTCTGTATGCAAGATGATCAAGACGTGCTGCATGAACAAATCTGATCTTGGTGGATGGA 719
Query 547 CACGGATTGTTGTTGAGAAGCCATTTGGCAAGGACCTGGAATCTGCAGAGCAACTGAGTT 606
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 720 CACGGATTGTTGTGGAGAAGCCATTTGGCAAGGACCTTGAATCTGCAGAGCAACTGAGTT 779
Query 607 CTCAGATTGGAGAGTTGTTTGATGAATCACAGATCTATCGTATAGACCATTATCTTGGGA 666
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 CTCAGATTGGAGAGTTATTTGATGAATCACAGATCTATCGTATAGACCATTATCTTGGGA 839
Query 667 AAGAATTGGTTCAAAACATGTTGGTCCTCCGATTTGCCAATCGCTTTTTCTTGCCACTTT 726
| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 840 AGGAATTAGTTCAAAACATGTTGGTCCTCCGGTTTGCAAATCGCTTTTTCTTGCCACTTT 899
Query 727 GGAACCGTGACAATATCGAGAACGTGCAGATTGTTTTCAGGGAAGATTTTGGAACTGAAG 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 GGAACCGTGACAATATCGAGAACGTGCAGATTGTTTTCAGGGAAGATTTTGGAACTGAAG 959
Query 787 GGCGTGGCGGATATTTTGATGAATATGGAATAATCCGTGATATTATTCAAAACCATCTGC 846
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 960 GGCGTGGCGGATATTTTGACGAATATGGAATAATCCGTGATATTATTCAAAACCATCTGC 1019
Query 847 TACAGGTTCTTTGCCTTGTTGCCATGGAGAAACCAATATCTCTTAAACCTGAGCACATCC 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1020 TACAGGTTCTTTGCCTTGTTGCCATGGAGAAACCAATATCTCTTAAACCTGAGCATATCC 1079
Query 907 GGGATGAGAAAGTGAAGGTGCTTCAATCGGTGGTTCCGATAAGCGATGACGAGGTAGTTC 966
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1080 GGGATGAGAAAGTGAAGGTGCTTCAATCTGTGGTTCCGATAAGCGATGACGAGGTAGTTC 1139
Query 967 TTGGACAATATGAAGGATATAGGGATGATTCTACTGTTCCAAACGACTCAAACACTCCAA 1026
|||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1140 TTGGACAATACGAAGGATATAGGGATGATGATACTGTTCCAAACGACTCAAACACTCCAA 1199
Query 1027 CATTTGCCACAACGATTCTTCGCATACACAATGAAAGATGGGAAGGTGTTCCATTTAT-T 1085
||||||||||||| || |||||||||||||| |||||||||||||||||||||||||| |
Sbjct 1200 CATTTGCCACAACAATCCTTCGCATACACAACGAAAGATGGGAAGGTGTTCCATTTATAT 1259
Query 1086 CTAAAGGCCGGAAAGGCGTTGAATTCAAGGAAGGCAGAAATTAGAATTCAGTTCAAGGAT 1145
||||||||||||| ||||||||||||||||||||||||||| | ||||| |||||||||
Sbjct 1260 -TAAAGGCCGGAAAAGCGTTGAATTCAAGGAAGGCAGAAATTCGCATTCAATTCAAGGAT 1318
Query 1146 GTTCCAGGCGATATATTCAAATGTCAGAAGCAAGGAAGGAACGAGTTTGTGATACGCTTG 1205
|| |||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 1319 GTCCCAGGCGACATATTCAGATGTCAAAAGCAAGGAAGGAACGAGTTTGTGATACGCTTG 1378
Query 1206 CAACCTTCAGAGGCAATGTACATGAAACTAACTGTTAAGCAACCAGGTCTAGAGATGAAT 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1379 CAACCTTCAGAGGCAATGTACATGAAACTAACTGTTAAGCAACCAGGTCTAGATATGAAT 1438
Query 1266 ACTGTGCAAAGTGAACTGGACTTGTCGTATGGGCAACGGTATCAAGGTGTCGCGATCCCT 1325
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1439 ACTGTGCAAAGTGAACTAGACTTGTCGTATGGGCAACGGTATCAAGGTGTCGCTATCCCT 1498
Query 1326 GAGGCATACGAGCGCTTAATTCTTGACACAATCAAAGGCGATCAACAACATTTCGTTCGT 1385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1499 GAGGCATACGAGCGCTTAATTCTTGACACAATCAAAGGCGATCAACAACATTTCGTTCGT 1558
Query 1386 AGAGACGAATTAAAGGTTGCGTGGGAGATCTTCACGCCGCTACTTCACAGGATCGACAAA 1445
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1559 AGAGACGAATTAAAGGTTGCGTGGGAGATCTTCACGCCGCTACTCCACAGGATCGACAAA 1618
Query 1446 GGAGAAGTGAAGTCAATCCCATACAAACCAGGAAGCCGAGGACCGAAAGAAGCTGATCAG 1505
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1619 GGAGAAGTAAAGTCAATCCCATACAAACCAGGAAGCCGAGGACCGAAAGAAGCTGATCAG 1678
Query 1506 CTACTAGAAAAAGCTGGTTATCTTCAAACTCATGGCTATATCTGGATCCCTCCTACACTA 1565
|||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1679 CTACTAGAGAAAGCTGGTTATCTTCAGACTCACGGCTATATCTGGATCCCTCCTACACTA 1738
Query 1566 TAAAACCCTACatatatata 1585
||||||||||||||||||||
Sbjct 1739 TAAAACCCTACATATATATA 1758
> AT3G27300.1 | Symbols: G6PD5 | glucose-6-phosphate dehydrogenase
5 | chr3:10083049-10086696 REVERSE LENGTH=1955
Length=1955
Score = 1646 bits (891), Expect = 0.0
Identities = 1349/1570 (86%), Gaps = 31/1570 (2%)
Strand=Plus/Plus
Query 17 GAAGATGGGATCTGGTCAATGGCACGTTGAGAAAAGGTCTACTTTTAGGAATGATTCGTT 76
||||||||| |||||||||||||| | ||||| ||||||||||| | ||||||||||||
Sbjct 132 GAAGATGGGTTCTGGTCAATGGCATATGGAGAAGAGGTCTACTTTAAAGAATGATTCGTT 191
Query 77 TGTAAGAGAATATGGTACAGTTC-CAGAAACTGGTTGTCTTTCAATCATAGTTCTTGGTG 135
||||| |||||| | ||| || | |||||||| |||| || ||||| ||||||||||
Sbjct 192 TGTAAAAGAATACAATCCAG-TCACGGAAACTGGGAGTCTCTCTATCATTGTTCTTGGTG 250
Query 136 CTTCTGGTGATCTTGCTAAGAAGAAGACTTTTCCTGCTCTTTTTAACCTATACCGTCAGG 195
||||||||||||||||||||||||||||||||||||| ||||| || |||| | |||||
Sbjct 251 CTTCTGGTGATCTTGCTAAGAAGAAGACTTTTCCTGCACTTTTCAATCTATTTCATCAGG 310
Query 196 GGTTTCTCAATCCAGATGAAGTTCATAT-TTTCGGGTATGCGCGGACTAAGATTTCTGAT 254
| ||||| |||||||||||||||||||| ||| || ||||| ||| ||||||| |||||
Sbjct 311 GATTTCTTAATCCAGATGAAGTTCATATATTT-GGATATGCAAGGAGTAAGATTACTGAT 369
Query 255 GAAGAACTGAGAGATCGGATTCGTGGATATCTTGTTGATGAGAAGAATGC-TG-A-GCAA 311
|| || || |||||| || || |||||||||||||||||||||||||| | | | ||
Sbjct 370 GAGGAGCTTAGAGATAAAATCCGCGGATATCTTGTTGATGAGAAGAATGCATCTAAGAAA 429
Query 312 GCTGAAGCTTTGTCAAAGTTTCTACAGCTGATTAAGTATGTGAGTGGCCCTTATGATTCT 371
| ||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 430 ACAGAAGCTTTGTCCAAGTTTCTAAAGCTGATTAAGTATGTGAGTGGACCTTATGATTCT 489
Query 372 GAGGAGGGGTTCCAGAGATTAGACAATGCAATTTCAGAGCACGAAATCTCCAAAAATAGT 431
||||| ||||| ||||||||||||| || |||| |||||||| || || ||||| | |
Sbjct 490 GAGGAAGGGTTTAAGAGATTAGACAAGGCGATTTTGGAGCACGAGATATCTAAAAAGACT 549
Query 432 ACTGAAGGGTCTTCTAGGAGACTGTTTTACCTTGCACTTCCACCGTCTGTTTATCCTTCT 491
||||||| ||||| |||||| ||||||| ||||||||||| |||||||| || ||| ||
Sbjct 550 GCTGAAGGATCTTCGAGGAGATTGTTTTATCTTGCACTTCCTCCGTCTGTATACCCTCCT 609
Query 492 GTATGCAAGATGATCAAGACGTGCTGCA-TGAACAAATCTGATCTTGGTGGATGGAC-AC 549
||| |||||||||||||| | || |||| | |||||||||||||||||||||||||| |
Sbjct 610 GTAAGCAAGATGATCAAGGCATGGTGCACT-AACAAATCTGATCTTGGTGGATGGACTA- 667
Query 550 GGATTGTTGTTGAGAAGCCATTTGGCAAGGACCTGGAATCTGCAGAGCAACTGAGTTCTC 609
|||||||||||||||| |||||||| ||||| |||||||||||||||| ||||||||||
Sbjct 668 GGATTGTTGTTGAGAAACCATTTGGAAAGGATTTGGAATCTGCAGAGCAGCTGAGTTCTC 727
Query 610 AGATTGGAGAGTTGTTTGATGAATCACAGATCTATCGTATAGACCATTATCTTGGGAAA- 668
||||||||| |||||||| ||| ||||||| |||||||| || || ||||| ||||||
Sbjct 728 AGATTGGAGCCTTGTTTGAAGAACCACAGATTTATCGTATTGATCACTATCT-GGGAAAA 786
Query 669 GAATTGGTTCAAAACATGTTGGTCCTCCGATTTGCCAATCGCTT-TTTCTTGCCACTTTG 727
|| || ||||||||||||||||| || || |||||||||||||| ||| |||||||| ||
Sbjct 787 GAGTTAGTTCAAAACATGTTGGTTCTTCGGTTTGCCAATCGCTTGTTT-TTGCCACTATG 845
Query 728 GAACCGTGACAATATCG-AGAACGTGCAGATTGTTTTCAGGGAAGATTTTGGAACTGAAG 786
|||||| |||||||| | | ||||| ||||| |||||||| |||||||||||||||||||
Sbjct 846 GAACCGCGACAATATTGCA-AACGTACAGATCGTTTTCAGAGAAGATTTTGGAACTGAAG 904
Query 787 GGCGTGGCGGATATTTTGATGAATATGGAATAATCCGTGATATTATTCAAAACCATCT-G 845
| || || ||||||||||||||||| ||||| || |||||||||||||||||||| || |
Sbjct 905 GTCGCGGTGGATATTTTGATGAATACGGAATCATTCGTGATATTATTCAAAACCA-CTTG 963
Query 846 CTACAGGTTCTTTGCCTTGTTGCCATGGAGAAACCAATATCTCTTAAACCTGAGCACATC 905
|| ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||
Sbjct 964 CTCCAGGTTCTTTGCCTTGTCGCCATGGAGAAACCAATCTCTCTTAAACCCGAGCACATC 1023
Query 906 CGGGATGAGAAAGTGAAGGTGCTTCAATCGGTGGTTCCGATAAGCGATGACGAGGTAGTT 965
|||||||||||||||||||| |||||||| ||| |||| |||| ||||| ||||| |||
Sbjct 1024 CGGGATGAGAAAGTGAAGGTTCTTCAATCTGTGATTCCCATAAAAGATGAAGAGGTGGTT 1083
Query 966 CTTGGACAATATGAAGGATATAGGGATGATTCTACTGTTCCAAACGACTCAAACACTCCA 1025
||||||||||||||||||||||| |||||| | ||||||||||| |||||||||||||||
Sbjct 1084 CTTGGACAATATGAAGGATATAGAGATGATCCAACTGTTCCAAATGACTCAAACACTCCA 1143
Query 1026 ACATTTGCCACAACGATTCTTCGCAT-ACACAATGAAAGATGGGAAGGTGTTCCATTTAT 1084
|| ||||||||||| ||||||||||| | ||||||||||||||||||||||||| |||||
Sbjct 1144 ACGTTTGCCACAACAATTCTTCGCATTA-ACAATGAAAGATGGGAAGGTGTTCCTTTTAT 1202
Query 1085 TCTAAAGGCCGGAAAGGCGTTGAATTCAAGGAAGGCAGAAATTAGAATTCAGTTCAAGGA 1144
|| |||||||||||||| ||| ||||| ||||||||| ||| | |||||||| || ||
Sbjct 1203 ACTGAAGGCCGGAAAGGCAATGAGTTCAAAGAAGGCAGATATTCGCATTCAGTTTAAAGA 1262
Query 1145 TGTTCCAGGCGATATATTCAAATGTCAGAAGCAAGGAAGGAACGAGTTTGTGATACGCTT 1204
|||||| ||||| |||||||||||||| || ||||| |||||||||||||| ||||||||
Sbjct 1263 TGTTCCTGGCGACATATTCAAATGTCAAAACCAAGGGAGGAACGAGTTTGTTATACGCTT 1322
Query 1205 GCAACCTTCAGAGGCAATGTACATGAAACTAACTGTTAAGCAACCAGGTCTAGAGATG-A 1263
||| ||||||||||| ||||||||||| |||||||| |||||||| ||||| |||||| |
Sbjct 1323 GCAGCCTTCAGAGGCCATGTACATGAAGCTAACTGTGAAGCAACCGGGTCTGGAGATGCA 1382
Query 1264 ATACTGTGCAAAGTGAACTGGACTTGTCGTATGGGCAACGGTATCAAGGTGTCGCGATCC 1323
| || ||||| |||||||| ||| | ||||| ||| || || |||| |||| | || |
Sbjct 1383 A-ACCGTGCAGAGTGAACTAGACCTATCGTACAAGCAGCGTTACCAAGATGTCTCAATTC 1441
Query 1324 CTGAGGCATACGAGCGC-TTAATTCTTGACACAATCAAAGGCGATCAACAACA-TTTCGT 1381
| ||||| ||||| ||| ||| ||||||||||||||| |||||| |||||||| ||| ||
Sbjct 1442 CAGAGGCTTACGAACGCCTTA-TTCTTGACACAATCAGAGGCGACCAACAACACTTT-GT 1499
Query 1382 TCGTAGAGACGAATTAAAGGTTGCGTGGGAGATCTTCACGCCGCTACTTCACAGGATCGA 1441
||| |||||||||||||||| || ||||| |||||||| || || ||||||||||||||
Sbjct 1500 TCGCAGAGACGAATTAAAGGCAGCTTGGGAAATCTTCACTCCACTGCTTCACAGGATCGA 1559
Query 1442 CAAAGGAGAAGTGAAGTCAATCCCATACAAACCAGGAAGCCGAGGACCGAAAG-AAGCTG 1500
||| ||||||||||| || |||||||||||| ||| ||||| || || | | |||| |
Sbjct 1560 CAAGGGAGAAGTGAAATCGGTCCCATACAAACAAGGTAGCCGTGGCCC-AGCGGAAGCAG 1618
Query 1501 ATCAGCTACTAGAA-AAAGCTGGTTATCTTCAAACTCATGGCTATATCTGGATCCCTCCT 1559
|||||||||| || |||||||||||| | || ||||||||||| || ||||||||||||
Sbjct 1619 ATCAGCTACTT-AAGAAAGCTGGTTATATGCAGACTCATGGCTACATTTGGATCCCTCCT 1677
Query 1560 ACACTATAAA 1569
||| | ||||
Sbjct 1678 ACATTGTAAA 1687
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78413251290
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5