BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg947764 Length=1027 Score E Sequences producing significant alignments: (Bits) Value AT5G40150.1 | Symbols: | Peroxidase superfamily protein | chr5... 1554 0.0 AT3G28200.1 | Symbols: | Peroxidase superfamily protein | chr3... 538 4e-152 > AT5G40150.1 | Symbols: | Peroxidase superfamily protein | chr5:16059509-16061043 REVERSE LENGTH=1535 Length=1535 Score = 1554 bits (841), Expect = 0.0 Identities = 956/1012 (94%), Gaps = 5/1012 (0%) Strand=Plus/Plus Query 1 GTTCTCAATCT-CCTTCAACAATGGCGGAACAATCTCAACTCCATAATCTCACCATCA-C 58 ||||| ||||| |||||||||||||||||||||||||||||| | ||||||||||||| | Sbjct 287 GTTCTGAATCTCCCTTCAACAATGGCGGAACAATCTCAACTCAAGAATCTCACCATCATC 346 Query 59 CATCATCATCCTCTGCTTCTCCTTCCAATCACTATCCTCCGCCGCTGAATCTCACCTCAC 118 | || || |||||||||| ||||||||||||||||||| |||||| ||||||||||| || Sbjct 347 C-TCCTCCTCCTCTGCTTATCCTTCCAATCACTATCCTTCGCCGCCGAATCTCACCTAAC 405 Query 119 CGTCGATTTCTACTCCAAATCTTGCCCTAATTTCCTCGACATTATTCGCGAAACCATCAC 178 ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| Sbjct 406 CGTCGATTTCTACTCCAAATCATGCCCTAAATTCCTCGACATTATCCGCGAAACCATCAC 465 Query 179 CAACAAACAGATCTCAACTCCAACAACCGCCGCCGCAGCTCTCCGCCTCTTCTTCCACGA 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 466 CAACAAACAGATCTCAACTCCAACAACCGCCGCCGCAGCTCTCCGCCTCTTCTTCCACGA 525 Query 239 CTGCTTCCCTAACGGCTGCGACGCCTCCGTCCTCGTTTCCTCAACCGCTTTCAACACCGC 298 ||| ||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 526 CTGTTTCCCCAACGGCTGCGACGCCTCCGTCCTCGTTTCTTCCACCGCTTTCAACACCGC 585 Query 299 AGAACGCGATTCATCAATCAATCTCTCTCTTCCGGGCGACGGATTCGACGTCGTAATCCG 358 ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||| Sbjct 586 CGAACGCGATTCATCAATCAATCTCTCTCTCCCCGGAGACGGATTCGACGTAGTAATCCG 645 Query 359 AGCTAAAACAGCTCTAGAACTCGCTTGTCCCAACACAGTCTCTTGCTCCGATATCATCGC 418 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 646 AGCTAAAACAGCTCTCGAACTCGCTTGTCCCAACACAGTCTCTTGCTCCGATATCATCGC 705 Query 419 CGCCGCGGTACGTGATCTACTCGTCACCGTCGGTGGTCCTTACTACGAAATCTCCCTCGG 478 || ||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| Sbjct 706 CGTCGCGGTACGTGATCTCCTCGTAACCGTCGGTGGACCTTACTACGAAATCTCCCTCGG 765 Query 479 CCGTCGCGATTCTCGTGTCT-CGAAATCGTCTCTCGTCTCCGATCTCCTCCCACTTCCGT 537 |||||||||||| || || ||||||| ||||||||||||||||||||||| || |||| Sbjct 766 CCGTCGCGATTCACGAA-CTTCGAAATCATCTCTCGTCTCCGATCTCCTCCCGCTCCCGT 824 Query 538 CGATGCAGATCTCGAAGCTCATCGATCAATTCAGCTCCAGAGGCTTCTCCGTTCAAGAAA 597 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 825 CGATGCAGATATCGAAGCTCATCGATCAATTCAGCTCCAGAGGCTTCTCCGTTCAAGAAA 884 Query 598 TGGTTGCTTTGAGCGGTGCTCACACCATCGGATTCTCACATTGCAAAGAGTTCACTAACC 657 ||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||| Sbjct 885 TGGTTGCTTTGAGTGGTGCTCACACCATCGGATTCTCACATTGCAAGGAGTTCACGAACC 944 Query 658 GGGTCAACCCGAATAATAGTACCGGGTATAACCCGAGATTCGCGGTGGCTTTGAAGAAAG 717 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct 945 GGGTCAACCCGAATAATAGTACCGGGTATAACCCGAGATTCGCGGTAGCTTTAAAGAAAG 1004 Query 718 CTTGTTTGAATTACAGAAATGACCCTACGATCTCTGTCTTCAACGACGTGATGACTCCAA 777 |||||| ||||| || ||||||||||||||| ||||||||||||||||| |||||||| | Sbjct 1005 CTTGTTCGAATTCCAAAAATGACCCTACGATATCTGTCTTCAACGACGTTATGACTCCGA 1064 Query 778 ACAAATTCGATAATATGTATTTCCAGAATATTCCGAAAGGTCTCGGGTTACTTGAATCGG 837 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1065 ACAAATTCGATAATATGTATTTCCAGAATATTCCGAAAGGTCTCGGGTTACTTGAATCGG 1124 Query 838 ATCACGGGTTATTCTCCGACCCGAGAACCCGTCCGTTTGTTGAGTTATACGCGAGAGACC 897 ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1125 ATCACGGTTTATTCTCCGACCCGAGAACCCGTCCGTTCGTTGAGTTATACGCGAGAGACC 1184 Query 898 AAGCTCGATTCTTTAAAGACTTCGCCGGAGCTATGCAGAAGTTGAGTCTTCACGGTGTTT 957 || |||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1185 AATCTCGGTTCTTTAACGACTTTGCCGGAGCTATGCAGAAGTTGAGTCTTCACGGTGTTT 1244 Query 958 TGACCGGACGGCGAGGAGAGATCCGACGAAGGTGTGATGCTATCAACTAAAA 1009 |||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1245 TGACCGGACGGCGAGGAGAGATCCGACGAAGGTGTGATGCGATCAACTAAAA 1296 > AT3G28200.1 | Symbols: | Peroxidase superfamily protein | chr3:10518070-10519166 FORWARD LENGTH=1097 Length=1097 Score = 538 bits (291), Expect = 4e-152 Identities = 700/894 (78%), Gaps = 41/894 (5%) Strand=Plus/Plus Query 126 TTCTACTCCAAATCTTGCCCTAA-TTTCCTCGACATTATTCGCGAAACCATCACCAACAA 184 |||||||| ||| | ||||| || ||||||||||| || || || || ||||| ||||| Sbjct 85 TTCTACTCAAAAACATGCCC-AAGATTCCTCGACATCATCCGTGACACAATCACAAACAA 143 Query 185 ACAGATCTC-AACTCCAACAACCGCCGCCGCAGCTCTCCGCCTCTTCTTCCACGACTGCT 243 ||| ||| | || ||| || ||||| ||||| | | |||| ||||||||||||||||| | Sbjct 144 ACAAATCACTAA-TCCCACCACCGCAGCCGCCGTTATCCGTCTCTTCTTCCACGACTGTT 202 Query 244 TCCCTAACGGCTGCGACGCCTCCGTCCTCGTTTCCTCAACCGCTTTCAACACCGCAGAAC 303 ||||||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||| Sbjct 203 TCCCTAACGGCTGCGACGCCTCCGTCCTCATCTCCTCCACCGCCTTCAACACCGCAGAAC 262 Query 304 GCGATTCATCAATCAATCTCTCTCTTCCGGGCGACGGATTCGACGTCGTAATCCGAGCTA 363 | || || || ||||| ||||| || || || ||||| ||||||||| | ||||||| | Sbjct 263 GTGACTCTTCCATCAACCTCTCACTCCCCGGAGACGGTTTCGACGTCATTGTCCGAGCCA 322 Query 364 AAACAGCTCTAGAACTCGCTTGTCCCAACACAGTCTCTTGCTCCGATATCATCGCCGCCG 423 |||||||||| ||||||||||||||||||||||| |||||||| || |||||| ||| || Sbjct 323 AAACAGCTCTCGAACTCGCTTGTCCCAACACAGTTTCTTGCTCAGACATCATCTCCGTCG 382 Query 424 CGGTACGTGATCTACTCGTCACCGTCGGTGGTCCTTACTACGAAATCTCCCTCGGCCGTC 483 | ||||||||| || ||||||||||||||||||||||||| | | ||||||||||| Sbjct 383 CAACACGTGATCTTCTAATCACCGTCGGTGGTCCTTACTACGACGTTTTCCTCGGCCGTC 442 Query 484 GCGATTCTCGTGTC-TCGAAATCGTCTCTCGTCTCCGATCTCCTCCCACTTCCGTCGATG 542 | ||||| | | |||||||| ||||| | ||||||| || || ||||| || | Sbjct 443 GTGATTCAAGAA-CGTCGAAATCTTCTCTTTTAACCGATCTTCTTCCTCTTCCTTCCACA 501 Query 543 C-AGATCTCGAAGCTCAT-CGATCAATTC-AGCTCCAGAGGCTTCTCCGTTCAAGAAATG 599 | | ||||| || |||| | | || || | || | ||| ||| | |||||||||||| Sbjct 502 CCA-ATCTCTAAAATCATTCAA-CAGTTTGAA-TCAAAAGGTTTCACTGTTCAAGAAATG 558 Query 600 GTTGCT-TTGAGCGGTGCTCACACCATCGGATTCTCACATTGCAAAGAGTTCACTAAC-C 657 |||||| || || || || || | || || || |||||||| |||||||| | | Sbjct 559 GTTGCTCTT-AGTGGAGCACATTCTATAGGGTTTTCACATTGTAAAGAGTTTG-TGGGTC 616 Query 658 GGGTCAACCCGAATAATAGTACCGGGTATAACCCGAGATTCGCGGTGGCTTTGAAGAAAG 717 |||| | |||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct 617 GGGTGGGTCGGAATAATA---CCGGGTATAACCCGAGATTCGCAGTGGCTTTGAAGAAAG 673 Query 718 CTTGTT-TGAATTACAG-AAATGACCCTACGATCTCTGTCTTCAACGACGTGATGACTCC 775 ||||| | |||||| ||| || || || |||||||| || || || | |||||||| Sbjct 674 CTTGTGCT-AATTACCCTAAA-GATCCGACTATCTCTGTGTTTAATGATATTATGACTCC 731 Query 776 AAACAAATTCGATAATATGTATT-TCCAGAATATTCCGAAAGG-TCTCGGGTTACTTGAA 833 || || || ||||||||||||| || ||||| || ||||| ||| |||||||||||| Sbjct 732 TAATAAGTTTGATAATATGTATTATC-AGAATCTTAA-AAAGGGTCTTGGGTTACTTGAA 789 Query 834 TCGGATCACGGGTTAT-TCTCCGACCCGAGAACCCG-TCCGTTTGTTGAG-TTATACGCG 890 |||||||| || |||| | || ||||| |||||| | | |||||||| || || || Sbjct 790 TCGGATCATGGATTATAT-TCTGACCCTAGAACCAGATAT-TTTGTTGATCTT-TATGCT 846 Query 891 AGAGAC-CAAGCTC-GATTCTTT-AAAGACTTCGCCGGAGCTATGCAGAAGTTGAGTCTT 947 | ||| |||| || | || ||| ||||| || || |||||||||||||||||||||| Sbjct 847 A-AGAATCAAGATCTG-TT-TTTCAAAGATTTTGCTAAAGCTATGCAGAAGTTGAGTCTT 903 Query 948 CACGGTGTTTTGACCGG-ACGGCGAGGAGAGATCCGACGAAGGTGTGATGCTAT 1000 ||| | ||| || | | |||||||||||||| ||||||| |||||||| Sbjct 904 TTTGGTATACAGACTGGTA-GAAGAGGAGAGATCCGAAGAAGGTGCGATGCTAT 956 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 50334615294 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5