BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg947767
Length=3002
Score E
Sequences producing significant alignments: (Bits) Value
AT5G40100.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 2165 0.0
AT1G17600.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 989 0.0
> AT5G40100.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:16043929-16047355 FORWARD LENGTH=3101
Length=3101
Score = 2165 bits (1172), Expect = 0.0
Identities = 1298/1360 (95%), Gaps = 4/1360 (0%)
Strand=Plus/Plus
Query 1 CTCTTCCAAACCAA-GTTTTTCGACAATGGCTTCCTCATCTGCTTCTCGTGCATCCAACT 59
|||||| || |||| || ||| |||||||||||||||||| || ||||||||||||| ||
Sbjct 23 CTCTTCTAAGCCAAGGTCTTT-GACAATGGCTTCCTCATCCGCATCTCGTGCATCCAGCT 81
Query 60 ATGATGTCTTCCTAAGTTTCCGTGGGGAAGACACTCGACATTCTATCGTCAGCCATTTGT 119
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 82 ATGATGTCTTCTTAAGTTTCCGTGGGGAAGACACTCGACATTCTATCGTCAGCCATTTGT 141
Query 120 ACGAAGCACTTACCAGCAGAGGAATTGCTACATTCAAAGACGACAAAAGGCTTGAGCTAG 179
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 142 ACGAAGCACTTACCAGCAGAGGAATTGCTACCTTCAAAGACGACAAAAGGCTTGAGCTAG 201
Query 180 GCGATCACATTTCTGAAGAACTCCAAAGAGCCATTGAGGGTTCAGATTTCGCTGTCGTGG 239
| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 202 GTGATCACATTTCTGAAGAACTCCAAAGAGCCATTGAGGGTTCAGATTTTGTTGTCGTGG 261
Query 240 TTCTCTCAGAGAACTACCCTACTTCTAGGTGGTGCTTAATGGAGCTCCAATCGATAATGA 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 262 TTCTCTCAGAGAACTACCCTACTTCTAGGTGGTGCTTAATGGAGCTCCAATCGATAATGG 321
Query 300 AGCTTCAGGTGGAGGGAAGACTTGGTGTCTTTCCCGTCTTCTACAGTGTAGAACCCTCTG 359
|||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 322 AGCTTCAGATGGAGGGAAGACTTGGTGTCTTTCCCGTCTTCTACAGAGTAGAACCCTCTG 381
Query 360 CCGTGAGGTATCAGCTAGGAAGTTTCGATCTTGAAGAGTACCAACGTGATCCA-AAACTG 418
| ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||| ||
Sbjct 382 CAGTGAGGTATCAGCTAGGAAGTTTCGATCTAGAAGGGTACCAACGTGATCCACAAA-TG 440
Query 419 GCGGATGTGGTTCCCAAGTGGAGACAAGCTCTTAAACTGATTGCTGATCTTTCAGGCGTG 478
|| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 441 GCTGATATGGTTCCCAAGTGGAGACAAGCTCTTAAACTGATTGCCGATCTTTCAGGCGTG 500
Query 479 GCATCCGGACAGTGCATTGATGAGGCAACTATGGTTCGGAAAATTGTCGAAGATATTTCA 538
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 501 GCATCGGGACAATGCATTGATGAGGCAACTATGGTTCGGAAAATTGTCGAAGATATTTCA 560
Query 539 AGGCGCAAGACATTGAAGCATAAGATAGACTTCAGAAATATTGTTGGGGTGGATACTCAC 598
| ||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||
Sbjct 561 AAGCGCAAGACATTGAAGCATAAGATAGATTTCAGAAATTTTGTTGGTGTGGATACTCAC 620
Query 599 ATGCAAGGTCTCAAGTTGCTCTTGGACATGGACTCCAATAATGATGAGGTTCGTATGATT 658
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 621 CTGCAAGGTCTCAAGTCGCTCTTGGACATGGACTCCAATAATGATGAGGTTCGTATGATT 680
Query 659 GGAATCTGGGGAATGGGAGGCATTGGAAAAACCACCATCGCCAAGTGTCTTTATGACCAG 718
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 681 GGAATATGGGGAATGGGAGGCATTGGAAAAACCACCATCGCCAAGTGTCTCTATGACCAG 740
Query 719 CTCTCATCTCAATTTACAACTAGTTATTTCACACAAGACATTAAGGGTATTCATAAAGAC 778
|||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct 741 CTCTCATCACAATTTACAGCTAGTTATTTCACACAAGACATTAAAGGTATTCATAAAGAG 800
Query 779 CTTGATCTACTGCATTTGCAAAACAAACTTCTCTACAATACCCTTGGTGATGATATTAGG 838
||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |
Sbjct 801 CTTGATCTACTGCATTTGCAAAACAGACTTCTCTACAATACCCTCGGTGATGATATTATG 860
Query 839 CCGTGGAGCGTGGAAGCTGGACGCGAGGTCATAGCGTCAAGACTTGGGAACCACAAGGTT 898
|||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 861 CCGTGGAGTGTGGAAGCTGGACGCGAGGTCATAGCGGCAAGACTTGGGAACCACAAGGTT 920
Query 899 CTTCTTGTACTTGATGGTGTGGATAAATTGGCCCAGATCCATGCTCTGGCAAAAGAGACG 958
|||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 921 CTTCTTGTGCTTGATGGTGTGGATAAACTGGTACAGATCCATGCTCTGGCAAAAGAGACA 980
Query 959 GGATGGTTTGGTCGTCAGAGCCGAATCATCATAACCACCCGAGATAAGGGCTTGCTCAAT 1018
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 981 AGATGGTTTGGTCGTCAGAGCCGAATCATCATAACCACCCGAGACAAGGGCTTGCTCAAT 1040
Query 1019 AGTTGTGGAGTAAAAACCATTTATGATGTTAAATGCTTGGACGATAAGGATTCCTTGCAG 1078
|||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| |||||
Sbjct 1041 AGTTGTGGAGTAAAAACCATCTATGATGTTAAGTGCTTGGACGACAAGGATTCCCTGCAG 1100
Query 1079 ATGTTTAAACAGATTGCTTTTGAAGGAGGCAGTCCTCCTTCTGTTGATTTTGAACAACTC 1138
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1101 ATGTTTAAACAGATTGCTTTTGAAGGAGGCAGTCCTCCTTCTGTTGATTTTGAACAGCTC 1160
Query 1139 TCAATCCGAGCAGCTCGGCTTGCTCACGGGCTTCCTTCTGCCCTTCAAGCCTATGCCTTA 1198
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1161 TCAATCCGAGCAGCTCGGCTTGCGCACGGGCTTCCTTCTGCCCTTCAAGCCTATGCCTTA 1220
Query 1199 TTTCTCCGCAGAAGGGCCAACTCTCCTGAGGAATGGGAAGAAGCAGTATGTGGACTTGAA 1258
|||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1221 TTTCTCCGTGGAAGGGCCAACTCTCCTGAAGAATGGGAAGAAGCAGTATGTGGACTTGAA 1280
Query 1259 AGTACTCCTGACGACAATATAATGGAAATCTTGAAAATTAGCTACGAGGGCTTAGCAAAA 1318
|||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct 1281 AGTACTCCTGACGAGAATATAATGGAAATCCTGAAAATTAGCTACGAGGGTTTAGCAAAA 1340
Query 1319 GCACATCAGAATGCTTTTCTCCATGTTGCATGTCTCTTTA 1358
||||||||||||||||||||||||||||||||||||||||
Sbjct 1341 GCACATCAGAATGCTTTTCTCCATGTTGCATGTCTCTTTA 1380
Score = 1151 bits (623), Expect = 0.0
Identities = 759/825 (92%), Gaps = 8/825 (1%)
Strand=Plus/Plus
Query 1801 TCATTTGAAGAAACTAGATGTGACGGGATCTAAGAATCTCAAACAACTTCCAGATCTTTC 1860
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1904 TCATTTGAGGAAACTAGATGTGACGGGATCTAAGAATCTCAAACAACTTCCAGATCTTTC 1963
Query 1861 ATGTAACC-AGAAGCTTGACGAGTTGATTCTAGAACAATGCAAGAGACTAAAAGGAATTC 1919
|||| || || |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1964 ATGT-GCCGAGGAGCTTGACGAGTTGCTTCTAGAACAATGCAAGAGACTAAAAGGAATTC 2022
Query 1920 CAGAGTCAATTGGAGAAAGGTCTACCTTAGGCAGGCTTAACCTATCATACTACGGTGGGC 1979
||||||| |||| ||| ||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 2023 CAGAGTCCATTGCAGAGAGGTCTACCCTAGGCAGGCTTAATCTATCATACTACGGTGGGG 2082
Query 1980 CTAAGAGTCCCATGGGTGTTGTTATACGGAAAGTGTCTCAGACGCAACGTATTACATTGG 2039
|||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct 2083 CTAAGAATCCCATGGGTGTTGTTATACAGAAAGTTTCTCAGACGCAACGTATTACATTGT 2142
Query 2040 AGTTCCCAACTGCAAGCGTGGAAATGCAACTTATGAATATGTCAATCATGGGAGACATTA 2099
|||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct 2143 TGTTCCCAACTTCAAGCGTGGAAATGCAACTTATGAATATATCAATCACGGGAGACATT- 2201
Query 2100 AG-TTTCGTATTTTCACAGATTTTGAAGGATATGCTGAATACTTCTCCTTTAGTACTGAG 2158
|| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2202 AGATTTCGTGTTTTTGCAGATTTTGAAGGATATGCTGAATACTTCTCCTTTAGTACTGAG 2261
Query 2159 CAAAAGATCCATGCTACAAGGACAGTAAGTGTCCACCAAGCTCCTCGGCTCGTCTCGGAG 2218
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2262 CAAAAGATCCATGCTACAAGGACAGTAAGTGTCCACCAAGCTCCTCGGCTCATCTCGGAG 2321
Query 2219 CTCAACAAATCTACTTCGCTCAATATCAGGAGGTTCAGCTACAAAGAGAACATTCGACCT 2278
|| |||||||||||| | ||||||||||||||||||||||||||||||||| |||||||
Sbjct 2322 CTTAACAAATCTACTACACTCAATATCAGGAGGTTCAGCTACAAAGAGAACGGTCGACCT 2381
Query 2279 GTCACCTTT-CACAGTTTTCCATATATACCTGCCCTGGAAGAGCTAAAACTAGTCAACTT 2337
||||| ||| ||||| |||||| |||| |||| |||| || ||||| |||||||||||||
Sbjct 2382 GTCAC-TTTACACAGCTTTCCAGATATTCCTGGCCTGAAACAGCTAGAACTAGTCAACTT 2440
Query 2338 AAATATCCAAAAACTATCAGATGGGATTGGTCACTTGGAACTCCTAGAAAAACTGGA-CT 2396
||| ||||||||||| |||||||||||||||||||| || |||||||||| ||||| ||
Sbjct 2441 AAACATCCAAAAACTGTCAGATGGGATTGGTCACTTTGAGTTCCTAGAAAATCTGGATCT 2500
Query 2397 TCAGCGGAAATGATTTTGAGAACTTACCAGAAGATATGAATAGACTTTCTCGGCTAAAAA 2456
||||||||||||||||||||| |||||||||||||||||||||||||| || | ||||
Sbjct 2501 -CAGCGGAAATGATTTTGAGAATTTACCAGAAGATATGAATAGACTTTCCCGATTGAAAA 2559
Query 2457 CTCTCTGTCTTCGAAACTGGAGCAAACTCAAGGAATTGCTAGAGCTAACTCAGGTGCAGT 2516
|||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 2560 CTCTCTGTCTCCGAAACTGCAGCAAACTCAAGGAATTGCCAGAGCTAACTCAGGTGCAGT 2619
Query 2517 CACTCACTCTTTCCAACTGTAGGAGCCTCAGATCATTGGTGAAACCCTCTGATGCAAGTC 2576
||||||||||||| ||||||| || ||||||||| ||||||||| ||||||||||||||
Sbjct 2620 CACTCACTCTTTCTAACTGTAAGAACCTCAGATCTTTGGTGAAAATCTCTGATGCAAGTC 2679
Query 2577 AAGATCCGGGCATATACTGTTTGCTTGAGCTTTGCCTTGACAACT 2621
||||||| || ||||| |||||||||||||||||||||||||||
Sbjct 2680 AAGATCCAAGCTTATACAGTTTGCTTGAGCTTTGCCTTGACAACT 2724
Score = 425 bits (230), Expect = 1e-117
Identities = 290/319 (91%), Gaps = 3/319 (1%)
Strand=Plus/Plus
Query 2622 ATCTCAGCAGCCATGACTTTAAGACACTGCCAGCAAGCATCAGAGATCTTACCTCATTGG 2681
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct 2785 ATCTCAGCAGCCATGACTTTAAGAAACTGCCATCAAGCATCAGAGATCTTACCTCATTGG 2844
Query 2682 TAACTCTCTGCCTCAATAACTGCAAGAAACTCAAATCGGTGGAAGAACTTCCACTGAGCC 2741
||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 2845 TAACTCTCTGCCTGAATAACTGCAAGAAACTCAAATCACTGGAAGAACTCCCACTGAGCC 2904
Query 2742 TTCAATTTCTAGATGCACAGGGTTGTGATTCTCTTGAAGCTGATGCTTTAGAACATTTTA 2801
| || ||||| || ||| ||||||||||||||||||||||||||| |||||||||||| |
Sbjct 2905 TCCAGTTTCTCGACGCAAAGGGTTGTGATTCTCTTGAAGCTGATGATTTAGAACATTTCA 2964
Query 2802 AAGAGAGACTAAACAAAGAGGTACCAGCACATCCG-AGTAGTGCTCGCTTCCAAGAAACG 2860
||| |||| |||||| ||||||| ||||||| || | ||||||||||||||||||||||
Sbjct 2965 AAGGGAGAGTAAACAGAGAGGTATCAGCACAACCACA-TAGTGCTCGCTTCCAAGAAACG 3023
Query 2861 CAGATGACGAGTTACGAACAGGATCACCAAGCCACAAAAAAGTCGCCTACCCAAGTTCCT 2920
||||| | |||||||| |||||||||||||||| ||| | |||||||||||||||||||
Sbjct 3024 GAGATGCCAAGTTACGAGCAGGATCACCAAGCCAGAAAGA-GTCGCCTACCCAAGTTCCT 3082
Query 2921 ATGCTGCTCACATTTCTAG 2939
|||||||||| ||||||||
Sbjct 3083 ATGCTGCTCATATTTCTAG 3101
Score = 305 bits (165), Expect = 1e-81
Identities = 214/238 (90%), Gaps = 2/238 (1%)
Strand=Plus/Plus
Query 1514 ACCGGTGTTTTTGGCAAAATGAATAAACTTAGGTTTGTCAAGGTTTACAAGCATGTTGAC 1573
|||||||||||| ||| |||| |||||||||||||| | ||||| |||||||||||| ||
Sbjct 1659 ACCGGTGTTTTTAGCAGAATGTATAAACTTAGGTTTTTAAAGGTCTACAAGCATGTTAAC 1718
Query 1574 GACAGAGGATCGAGGCTGCAGGTGATTCGTGAAGATCAATACCCTTCCATGAATGGTAC- 1632
|| |||| ||||| | |||||||||||| ||||||| ||||||||||||| ||| || |
Sbjct 1719 GAGAGAGAATCGATGTTGCAGGTGATTCCTGAAGATGAATACCCTTCCATAAATTGT-CT 1777
Query 1633 CCTACTCCACTGGGACGCATTTCCATTGAGCACATTGCCTTTCACGTTTAACACATATTG 1692
||||||||| |||||||||||||||||||||| ||| ||| ||| |||||| ||||||||
Sbjct 1778 CCTACTCCATTGGGACGCATTTCCATTGAGCAAATTTCCTCTCAGGTTTAATACATATTG 1837
Query 1693 TCTTGTTGAACTCATTCTGCGTCACAGCAACCTAGAAACACTCTGGAGTGGAGTACTG 1750
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1838 TCTTGTTGAACTCAATCTGCGTCACAGCAACCTAGAAACACTCTGGAGTGGAGTACTG 1895
> AT1G17600.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr1:6052936-6056664 REVERSE LENGTH=3332
Length=3332
Score = 989 bits (535), Expect = 0.0
Identities = 1110/1378 (81%), Gaps = 77/1378 (6%)
Strand=Plus/Plus
Query 16 TTTTTCGACAATGGCT-TCCTCATCTGCTTCTCGTGCATCCAACTATGATGTCTTCCTAA 74
|||||| ||||||| | ||||| ||||| |||||| ||| || || || |||||||| |
Sbjct 83 TTTTTCAACAATGG-TGTCCTCCTCTGCACCTCGTGTATCGAAGTACGACGTCTTCCTCA 141
Query 75 GTTTCCGTGGGGAAGACACTCGAC-ATTCTATCGTCAGCCATTTGTACGAAGCACTT-AC 132
| |||||||| |||||||| || | | | |||||||| ||||| || | ||||||| |
Sbjct 142 GCTTCCGTGGAGAAGACACCCG-CAAAACCATCGTCAGTCATTTATATGCAGCACTTGA- 199
Query 133 CAGCAGAGGAATTGCTACATTCAAAGACGACAAAAGGCTTGAGCTAGGCGATCACATTTC 192
|||||||| |||| ||| |||||||| ||| ||||||||||| ||||||||||||||||
Sbjct 200 TAGCAGAGGCATTGTTACTTTCAAAGATGACCAAAGGCTTGAGATAGGCGATCACATTTC 259
Query 193 TGAAGAACTCCAAAGAGCCA-TTGAGG-GTTCAGA-TTTCGCTGTCGTGGTTCTCTCAGA 249
|| |||||||| |||| || | | || |||| || ||||||||| || |||||||| ||
Sbjct 260 CGATGAACTCCACAGAG-CACTAG-GGAGTTC-GAGTTTCGCTGTTGTTGTTCTCTCCGA 316
Query 250 GAACTACCCTACTTCTAGGTGGTGCTTAATGGAGCTCCAATC-GATAATGAAGCTTCA-G 307
||||||| ||||||| || ||||||||| |||| || ||| | ||||||| ||||| | |
Sbjct 317 GAACTACGCTACTTCGAGATGGTGCTTATTGGAACTTCAA-CTGATAATGGAGCTT-ATG 374
Query 308 GTGGAGGGAAGACTTGGTGTCTTTCCCGTCTTCTACAGTGTAGAACCCTCTGCCGTGAGG 367
|||||||||||||| ||||||||| ||||||| | ||||| || || | ||||||
Sbjct 375 AAGGAGGGAAGACTTGAAGTCTTTCCCATCTTCTATGGAGTAGATCCTTCCGTGGTGAGG 434
Query 368 TATCAGCTAGGAAGTTTCGATC-TT-G-AAGAGTACCAACGTGATC-CAAAACTGGCGGA 423
||||||||||||||||| || || | || |||||||| | | || ||| ||| |||
Sbjct 435 CATCAGCTAGGAAGTTTC--TCTTTAGTAA-AGTACCAA-G-G-TCTTGAAA-TGGTGGA 487
Query 424 TGTGGTTCCCAAGTGGAGACAAGCTCTTAAACTGATTGCTGATCTTTCAGGCGTGGCATC 483
| ||||| || ||||||| |||||||||| || || || ||||||||||||||| ||
Sbjct 488 TAAGGTTCTCAGGTGGAGAGAAGCTCTTAACCTAATCGCCAATCTTTCAGGCGTGGTTTC 547
Query 484 CGGACAGTGCATTGATGAGGCAACT-ATGGTTCGGA-AAATTGTCGA-AGATATTTCAAG 540
| || || |||||||||| | | |||||| ||| |||||| | | ||||||||||||
Sbjct 548 AAGCCACTGTGTTGATGAGGCTA-TAATGGTT-GGAGAAATTG-CTAGAGATATTTCAAG 604
Query 541 GCGCAAGACATTGAAGCATAAGATAGACTTC-AGAAATATTGTTGGGGTGGATA-CTCAC 598
|| |||||||| |||||| |||||| || |||||||||||||| | || | |||||
Sbjct 605 ACGTGTGACATTGATGCATAAAATAGAC-TCTGGAAATATTGTTGGGAT-GAAAGCTCAC 662
Query 599 ATGCAAGGTCTCAAGT--TGCTCTTGGA-CATGGACTCCAATAATGATGAGGTTCGT-AT 654
||| ||||||| || | | |||||||| || ||| ||| | ||||||||| | |
Sbjct 663 ATGGAAGGTCTTAA-TCAT-CTCTTGGATCA-GGAATCC----A--ATGAGGTTC-TCCT 712
Query 655 GATTGGAATCTGGGGAATGGGAGGCATTGGAAAAACCACCATCGCCAAGTGTCTTTATGA 714
| | |||||||||||||||||||| ||||| |||||| |||| | |||||||| |||||
Sbjct 713 GGTAGGAATCTGGGGAATGGGAGGAATTGGGAAAACCTCCATTGTTAAGTGTCTCTATGA 772
Query 715 CCAGCTCTCATCTCAATTTACAACT-AGTTATTTCACACAAGACATTAAG-G-G-TA-TT 769
|||||||||| || ||||| || || | || ||||| | || |||||||| | | || |
Sbjct 773 CCAGCTCTCACCTAAATTTCCAGCTCA-TTGTTTCATAGAAAACATTAAGAGTGTTAGTA 831
Query 770 CATA-AA-GACCTTGATCTACTGCATTTGCAAAACA-AACTT-CTCTACAATACCCT-TG 824
| | || | || ||||||| |||||||||||| | || || |||| || || ||| |
Sbjct 832 AAGACAATGGCCATGATCTAAAGCATTTGCAAAA-AGAA-TTGCTCTCCAGTATCCTCT- 888
Query 825 GTGATGATATTAGGCCGTGGAGCGTGGAAGCTGGACGCGAGGTCATAGCGTCA-AGACTT 883
|||||||||||||| |||||||||||||||||| || | | ||| | ||||||
Sbjct 889 GTGATGATATTAGGTTATGGAGCGTGGAAGCTGGATGCCAAGAGATA-AAAAAGAGACTT 947
Query 884 GGGAACCACAAGGTTCTTCTTGTACTTGATGGTGTGGATAAATTGGCCCAGATCCATGCT 943
||||| || |||||| ||||||| |||||||||||||||||| |||| ||| | ||||||
Sbjct 948 GGGAATCAAAAGGTTTTTCTTGTGCTTGATGGTGTGGATAAAGTGGCGCAGGTGCATGCT 1007
Query 944 CTGGCAAAAGAGACGGGA-TGGTTTGGTCGTCAGAGCCGAATCATCATAACCACCCGAGA 1002
|||||||||||| | |||||||||| | ||||||||| ||||||||||| |||||
Sbjct 1008 TTGGCAAAAGAGA-AAAACTGGTTTGGTCCTGGGAGCCGAATTATCATAACCACTCGAGA 1066
Query 1003 TAAGGGCTTGCTCAATAGTTGTGGAGTAAAAACCATTTATGATGTTAAATGCTTGGACGA 1062
|| |||||||||||||| ||||||||| || | ||||||| ||||| |||||||| ||
Sbjct 1067 TATGGGCTTGCTCAATACCTGTGGAGTAGAAGTCGTTTATGAGGTTAAGTGCTTGGATGA 1126
Query 1063 TAAGGATTCCTTGCAGATGTTTAAACAGATTGCTTTTGAAGGAGGCA-GTCCTCCTTCTG 1121
||||||| || | |||||||||||||||||||||||||||||||| | |||||||| ||
Sbjct 1127 TAAGGATGCCCTCCAGATGTTTAAACAGATTGCTTTTGAAGGAGG-ACTTCCTCCTTGTG 1185
Query 1122 TTGATTTTGAACAACTCTCAATCCGAGCAGCTCGGCTTGCTCACGGGCTTCCTTCTGCCC 1181
| |||||| ||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 1186 AGGGTTTTGACCAACTCTCAATCCGAGCTTCTAAGCTTGCTCACGGGCTTCCTTCTGCCA 1245
Query 1182 TTCAAGCCTATGCCTTATTTCTCCGCAGAAGGGCCAAC-TCTCCTGAGGAATGGGAAGAA 1240
||||||||||||| ||||||||||| ||| || || | ||||||||| |||||||||
Sbjct 1246 TTCAAGCCTATGCATTATTTCTCCGTGGAA-GGACAGCGAGTCCTGAGGAGTGGGAAGAA 1304
Query 1241 GCAGTATGTGGACTTGAAAGTACTCCTGACGACAATATAATGGAAATCTTGAAAATTAGC 1300
||| | ||| ||||||||| | || |||||| |||||||||||||||||||||||||||
Sbjct 1305 GCACTGGGTGCACTTGAAAGCAGTCTTGACGAGAATATAATGGAAATCTTGAAAATTAGC 1364
Query 1301 TACGAGGGCTTAGCAAAAGCACATCAGAATGCTTTTC-TCCATGTTG-CATGTCTCTT 1356
|||||||||||| ||||| |||||||||||| | ||| | ||||||| | ||||||||
Sbjct 1365 TACGAGGGCTTACCAAAACCACATCAGAATG-TATTCCTTCATGTTGTC-TGTCTCTT 1420
Score = 501 bits (271), Expect = 2e-140
Identities = 658/839 (78%), Gaps = 49/839 (6%)
Strand=Plus/Plus
Query 1804 TTTGAAGAAACTAGATGTGACGGGATCTAAGAATCTCAAACAACTTCCAGATCTTTCATG 1863
|||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||| |
Sbjct 1973 TTTGAAGAGACTAGATGTGACGGGATCTAAGCATCTCAAGCAACTTCCAGATCTTTCAAG 2032
Query 1864 TAACCA-GAAG-CTTGACGAGTTGATTCTAGAACAATGCAAGAGACTAAAAGGAATTCCA 1921
| | || | || ||||| || ||| |||| |||||||||| |||||| | || ||||||
Sbjct 2033 T-ATCACG-AGTCTTGAGGAATTGCTTCTGGAACAATGCACGAGACTGGAGGGCATTCCA 2090
Query 1922 GAGTCAATTGGAGAAAGGTCTACCTT-AGGCAGGCTTAACCTATCATACTACGGTGGGCC 1980
|||| |||||| ||||||||||||| | | | |||||| ||||| ||| || ||||
Sbjct 2091 GAGTGTATTGGAAAAAGGTCTACCTTAAAG-AAGCTTAAGCTATCCTACCGTGGAGGGCG 2149
Query 1981 TAAG-AGT-CCCATG-GGTGTTGTTATACGGAAAGTGTCT-C-AGAC-GCAACGTATTAC 2034
| || ||| ||| || ||| || || ||| |||| ||| | || | ||||| ||||
Sbjct 2150 T-AGAAGTGCCC-TGCGGT-TTTTTCTAC-GAAA--ATCTACAAGGCAGCAACATATTGG 2203
Query 2035 ATTGGAGTTCCCA-ACTGCAAGCGTGGAAATGCA---ACTTATGAATATGTCAATCATGG 2090
||||||||||||| || |||| ||| ||||| | |||||| || || || || ||
Sbjct 2204 ATTGGAGTTCCCAGAC-GCAAAAGTGAAAATGGATGCACTTATAAACATATCGATTGGGG 2262
Query 2091 GAGACATTAAGTTT-CGTATT--TTCACAGATTTTGAAGGATATGCTGAATACTTCTCCT 2147
||||||||| ||| || || |||| | |||| | |||||||||||||||| |||| |
Sbjct 2263 GAGACATTACTTTTGAGT-TTCGTTCA-AAATTTAG-AGGATATGCTGAATACGTCTCTT 2319
Query 2148 TTAGTACTGAGCAAAAGAT--CCATGCTACA-AGGACAG-TAAGTGTCCACCAAGCTCCT 2203
||| | |||||||| |||| |||| || | || | | | ||| | || ||||| |||
Sbjct 2320 TTAATTCTGAGCAACAGATACCCAT--TATATCGG-C-GATGAGTCTGCAACAAGCACCT 2375
Query 2204 CGGCTCGTCTCGGAGCT-CAACA-AATCTACTTCGCTCAATATCAGGAGGTTCAGCTACA 2261
|| || |||| ||| | ||||| | || | ||| ||| |||| |||||||||| |||
Sbjct 2376 TGGGTCATCTCAGAG-TGCAACAGATTC-AATTCCCTCCGCATCATGAGGTTCAGCCACA 2433
Query 2262 AAGAGAACATTCG-ACCTGTCACCTTTCACAGT-TTTCCATATATACCTGCCCTGGAAGA 2319
|||| ||| | | | || || ||||| || || |||||| || | || | |||| ||||
Sbjct 2434 AAGAAAACGGT-GAATCTTTCTCCTTTGAC-GTCTTTCCAGATTTTCCCGACCTGAAAGA 2491
Query 2320 GCTAAAACTAGTCAACTTAAATATCCA--AAAACTATCAGATGGGATTGGTCACTTGGAA 2377
|||||||||||| |||||||| || || |||| | || ||||||| ||||| ||||
Sbjct 2492 GCTAAAACTAGTGAACTTAAACAT-CAGGAAAA-TCCCATCTGGGATTTGTCACCTGGAT 2549
Query 2378 CTCCTAGAAAAACTGGACTTCAGCGGAAATGATTTTGAGAACTTACCAGAAGATATGAAT 2437
| ||||| || |||||| ||||||||||||||||||||||||||||||||| ||||| |
Sbjct 2550 TTACTAGAGAAGCTGGACCTCAGCGGAAATGATTTTGAGAACTTACCAGAAGCTATGAGT 2609
Query 2438 AGACTTTCTCGGCTAAAAACTCTCTGTCTTCGAAACTGGAGCAAACTCAAGGAATTGCTA 2497
|| ||||| ||| ||||||||||||| |||| |||||| || ||| |||| |||| |
Sbjct 2610 AGCCTTTCCCGGTTAAAAACTCTCTGGCTTCAAAACTGCTTTAAGCTCCAGGAGTTGCCA 2669
Query 2498 GAGCTAACTCAGGTGCAGTCACTCACTCTTTCCAACTGTAGGAGCCTCAGATCATTGGTG 2557
||||||||||||||||| |||| || ||| |||||||||||| ||| |||||||||| |
Sbjct 2670 AAGCTAACTCAGGTGCAGACACTTACACTTACCAACTGTAGGAACCTTAGATCATTGGCG 2729
Query 2558 AAACCCTCTGATGCAAGTCAAGATCCGGGCATATACTGTTTGCTTGAGCTTTGCCTTGA 2616
|||| ||| | ||||||||||| ||| | |||||||||||||||||||||||||||
Sbjct 2730 AAACTATCTAACACAAGTCAAGATGAGGGAAGATACTGTTTGCTTGAGCTTTGCCTTGA 2788
Score = 233 bits (126), Expect = 6e-60
Identities = 239/291 (82%), Gaps = 17/291 (6%)
Strand=Plus/Plus
Query 2622 ATCTCAGCAGCCATGACTTTAAGACACTGCCAGCAAGCATCAGAGATCTTACCTCATTGG 2681
||||||||| |||||| ||| ||||| ||||| |||||||||||||||||||||||||||
Sbjct 2854 ATCTCAGCAACCATGATTTTGAGACATTGCCATCAAGCATCAGAGATCTTACCTCATTGG 2913
Query 2682 TAACTCTCTGCCTCAATAACTGCAAGAAACTCAAATCGGTGGAAGAACTTCCACTGAGCC 2741
|||| || |||||||||||||||||||||||||||||||||||| ||||||| || | |
Sbjct 2914 TAACACTTTGCCTCAATAACTGCAAGAAACTCAAATCGGTGGAAAAACTTCC-CTT-GTC 2971
Query 2742 T-TC-AATTTCTAGATGCACAGGGTTGTGATTCTCTTGAAGCTGATGCTTTAGAACATTT 2799
| || ||||||| |||||||| || ||||||||||| ||||||| | || |||||||||
Sbjct 2972 TCTCCAATTTCTCGATGCACACGGCTGTGATTCTCTCGAAGCTGGTTCTGCAGAACATTT 3031
Query 2800 TAAAGAGAGACTAAACAAAGAGGTACCAGCACATCCGAGTAGTG-CTCGCTTCCAAGAAA 2858
| | || | || |||||| |||| || | ||| | || | || || |||||||||||
Sbjct 3032 TGAGGACATACCAAACAAGGAGGCAC-AT-ACA-C-GAA-A-TGACTA-CTTCCAAGAAA 3084
Query 2859 C-GCAGATGACGAGTTACGAACAGGATCAC-CAAGCCACAAAAAAGTCGCC 2907
| | ||||| ||||||| | || | | || |||||||||| ||| |||||
Sbjct 3085 CTG-AGATGTCGAGTTATGTACTGAAA-ACTCAAGCCACAAGAAA-TCGCC 3132
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 149246655425
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5