BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg947866
Length=1769
Score E
Sequences producing significant alignments: (Bits) Value
AT5G39480.1 | Symbols: | F-box family protein | chr5:15801635-... 2309 0.0
AT5G39490.1 | Symbols: | F-box family protein | chr5:15805808-... 2185 0.0
AT5G39460.1 | Symbols: | F-box family protein | chr5:15788289-... 994 0.0
AT5G39450.1 | Symbols: | F-box family protein | chr5:15785717-... 686 0.0
AT5G39470.1 | Symbols: | F-box family protein | chr5:15791952-... 219 1e-55
> AT5G39480.1 | Symbols: | F-box family protein | chr5:15801635-15803341
REVERSE LENGTH=1707
Length=1707
Score = 2309 bits (1250), Expect = 0.0
Identities = 1568/1721 (91%), Gaps = 24/1721 (1%)
Strand=Plus/Plus
Query 21 ATGATGAACACGGAATCATTTGGTGCTTGCTTGCTTCTTACGCTTCCAGAAGATGTGTTT 80
|||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGATGAACAAGGAATCGTTTGGAGCTTGCTTGCTTCTTACGCTTCCAGAAGATGTGTTT 60
Query 81 ACTGTTATCTCTCGTTTTCTTTCACCAAGCGACATTTGCAATCTAATCTTGTGCGGCAAA 140
||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 61 GCTGTTATTTCTCGTTTTCTTTCTCCAAGCGATATTTGCAATCTAATCTTGTGCGGCAAA 120
Query 141 AGTCTTTGTGCCCTTGTCGATTCCGAGAAGACGTGGCTTGTGCAATGTGAAGAAGTAAAG 200
||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct 121 AGTCTGCCTGCCCTTGTCGATACCGAGAAGATGTGGCTTGTGCAATGTGAAGAAGTAAAG 180
Query 201 GTTCTTCCTTTGTTTGAAATAGTCCAATGGCGAAGCGGGATCTCTTCTTACAAGGCACTT 260
|||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct 181 GTTCTTCCTTTGTTGGAAATAGTCCAATGGCGAATCGGGATCTCTTCTTACAAGGCCCTT 240
Query 261 TGTAGGTTTCTTGTAGAGGTGGTGAAGCCTCTTGTTGGGATTTGGGTTCAACAAAACCCT 320
||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||
Sbjct 241 TGTAGGTTTCTTGTAGAGGTGGTGAAGCCGCTTCTTGGGATTTGGGTGCAACAAAACCCT 300
Query 321 GAACTTGGGAATGTCGTTTATGTCATGCCTGGTTTCTTGTCTGTTGTTGGGTGCCGGATA 380
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 301 GAACTTGGGAATGTTGTTTATGTGATGCCTGGTTTCTTGTCTGTTGTTGGGTGCCGGATA 360
Query 381 ATTCCACAAAAGGTTGGTCCTTTGTGGATTCAAGAGGGCCGAGTTAAGTGGTCACCTGTG 440
|||||||||||||||| ||||| |||||||||||||| |||||||||||||||||| |||
Sbjct 361 ATTCCACAAAAGGTTGCTCCTTCGTGGATTCAAGAGGACCGAGTTAAGTGGTCACCGGTG 420
Query 441 TTTGAGATAATCTGCGGTTTTGATGGCTCTACCGGGTTTTTCCTTCATGGAAGAGACAAA 500
||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||
Sbjct 421 TTTGAGATAATCTGCGGGTTTGATGGCTCTAACGGGTTTTTCCTCCATGGAAGAGACAAA 480
Query 501 GAAGGCAGTTGCTTGTACCCTGGTTTTGTTATGGGCATTGAGAAGAGTTGCAATTTGCTT 560
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 481 GAAGGCAGTTGCTTGTACCCTGGTTTTGTTATGGGCATTGAGAAGAGTTGCAATGTACTT 540
Query 561 CAACTCGAAATTGAGCCGAGGCGAGAGAAGAGTTCGTGCAATGAGATTGAGAGAGGAGCC 620
|| ||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 541 CAGCTCGATGTTGTGCCGAGGCAAGAGAAGAGTTCGTGCAATGAGATTGAGAGAGGAGCC 600
Query 621 TCAAGAAAGGGGGAAAAGGAGGGAGAGGTTCCATTTTGGATGCTCGCTTTTAGCGATAGA 680
||||| | | ||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct 601 TCAAG--A----G---AGGAGGGAGAGATTCCATTTTGGATGCTCGCTTTTAGTGATAGA 651
Query 681 AAAAACTTACTCAATATTGTGACAAGCCATGTAGGTATACATGTGGTGGAGCCATTAAAT 740
||||| || |||||||||||||||||||||||| || ||||||||||||| |||||||||
Sbjct 652 AAAAATTTGCTCAATATTGTGACAAGCCATGTAAGTCTACATGTGGTGGAACCATTAAAT 711
Query 741 GGAAGGTTATTTCCCACATCAAAAGATGATGAAGCAATGTTGGTCGAACGCAGAACCATG 800
| || |||||||||||||| ||| |||||||||||||| |||| ||||||||||||||
Sbjct 712 GAAATGTTATTTCCCACATTGAAATATGATGAAGCAATGCTGGTTGAACGCAGAACCATT 771
Query 801 CTCTTTAAAATGCACAAGTTTGGTGGAAAGTGGAAGAACATGAATTTGGAGGAGGATGAT 860
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 772 CTCCTTAAAATGCACAAGTTTGGTGGAAATTGGAAGAACATGAATTTGGAGGAGGATGAT 831
Query 861 CAGTTGTGTTACAATCCTATGC-AGCTAGACATAAACGAGATGTTGGAAAATCTTGGTGA 919
||||||||||||||||| |||| || || | ||||||||||||||||||||||| |||||
Sbjct 832 CAGTTGTGTTACAATCCCATGCAAG-TAAAAATAAACGAGATGTTGGAAAATCTCGGTGA 890
Query 920 TGACTGGTTTTTTGACATGGAAGAGGAGCTGATAGAGGTCACACCAACGGAGAGCACGCA 979
||||| ||||||| || |||||||||||||||||||||||||||||||||| |||| |
Sbjct 891 TGACTATTTTTTTG--AT-GAAGAGGAGCTGATAGAGGTCACACCAACGGAGAACACGAA 947
Query 980 TGTTTTAGGGGAGTCTAGTTCTTCAAAGAACACAGCACCTTCG-AGCAGTGAAATTAGAC 1038
|||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct 948 TGTTTTAGGGGAGTCTAGTTCTTCAAAGAACACAACACCTTCGCAG-AGTGAAATTAGAG 1006
Query 1039 ATTCGAATCGCCAAAGCTTTCTTAGCTCTGGTGATACATTTGGTCTTAGTCTCAAAGCTT 1098
||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||
Sbjct 1007 TTTCGAATCGCCAAAGCTTTCTTAGCTCTGGTGATACATTCGGTCTTGGTCTCACAGCTT 1066
Query 1099 CCTACTCTGAGCTAAATTCTTACGAAGGGTGGCCATACATGTACGCTCATCACTTTTCAC 1158
||||| |||| | || ||| ||||||||||||||||| || ||| ||||||| ||
Sbjct 1067 CCTACAGTGAGATGTCTTATTATAAAGGGTGGCCATACATGCACTTTCACCACTTTTTAC 1126
Query 1159 TTTATAAACTACCGGTTAAGAAATTCGTTGATCACGAAGTCGAAGTGTATGCCGGTTTGT 1218
||||||||||||| ||||||||| ||| ||| | || |||| |||||| |||||||
Sbjct 1127 TTTATAAACTACCAGTTAAGAAAGCCGTCGAT--C-AA---GAAGCGTATGCTGGTTTGT 1180
Query 1219 GGGGAGGAACGTTTGGCTGGCCAGCTGGGAAATGTCCTAAAAGTAAGCCCGAAAAGTCTC 1278
||||||||||| ||||||| ||||||||||||||||||||| ||||| | ||||||||||
Sbjct 1181 GGGGAGGAACGATTGGCTGCCCAGCTGGGAAATGTCCTAAAGGTAAGACGGAAAAGTCTC 1240
Query 1279 TTTACTTACTGATGCTCACTTATGAAGAATCTGAAGAGTATAATGAGAGAGTTCTCATTG 1338
||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct 1241 TTTACTTACTGATGCTCACTTATGAAGAATCTGAAGAACATAGTGAGAGAGTTCTCATTG 1300
Query 1339 GGACAAAAATACTCGAAGGAAAGCGCTATGTGAGGCGTCCCAATGGAACTGCAATGTTTA 1398
|||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||
Sbjct 1301 GGACAAAAATACTCGAAGGAAAGCGCTATGTGCGTCATCCCAATGGAACTGCAATGTTTG 1360
Query 1399 TTGTAAATATCGATACACCTACCCTTGAGCCCTTTCCGGTGGATGCAGATGAAATAGATT 1458
||||||| |||||||||||| | ||||| |||||||| ||||||||| |||||| | |||
Sbjct 1361 TTGTAAAGATCGATACACCTTCTCTTGATCCCTTTCCAGTGGATGCAAATGAAACACATT 1420
Query 1459 TTGAGAATTCTTACTCGGGA-AACGGTATCGCAGAAGGTTACGGATTCCGCTATCCCGGT 1517
|||||||||||||||||||| || ||||||||||| ||||| |||||||||| | |||
Sbjct 1421 TTGAGAATTCTTACTCGGGAGAA-GGTATCGCAGAGGGTTATTCATTCCGCTATACAGGT 1479
Query 1518 TCAAAACCTGGTTCCCTTTTCGTGATCACTAATGATCTTCTTGCATTCGTTTGGCAAGAA 1577
|| ||||| ||||||||||||||||| |||||||||||||| |||||||||||| |||||
Sbjct 1480 TCTAAACCCGGTTCCCTTTTCGTGATTACTAATGATCTTCTCGCATTCGTTTGGAAAGAA 1539
Query 1578 ACCAAAGATGTGATTACGTTGCAAAGACTAAACCTTGCAGAGATCTTGAAGAAAGTTTTA 1637
||||||| |||||||||||||||||||||||||||| |||||||||||||||| | |||
Sbjct 1540 ACCAAAGTTGTGATTACGTTGCAAAGACTAAACCTTACAGAGATCTTGAAGAAGGGTTTG 1599
Query 1638 GGTTCTTGTGTGCCGCCTTTGCCTCCAACTAAGAATTTTACTTATATGAGAAGGTCCTAC 1697
|| ||||||||||||||||||||||| | |||||||||||||||||||||||||||| |
Sbjct 1600 GGATCTTGTGTGCCGCCTTTGCCTCCTTCGAAGAATTTTACTTATATGAGAAGGTCCTTC 1659
Query 1698 ATAAACGAGTTTACCAAGTCATCGACCGATCCGTCTTACTC 1738
||||||||||||||||||| ||| |||||| ||||||||||
Sbjct 1660 ATAAACGAGTTTACCAAGTTATCAACCGATTCGTCTTACTC 1700
> AT5G39490.1 | Symbols: | F-box family protein | chr5:15805808-15807508
REVERSE LENGTH=1701
Length=1701
Score = 2185 bits (1183), Expect = 0.0
Identities = 1552/1727 (90%), Gaps = 37/1727 (2%)
Strand=Plus/Plus
Query 24 ATGAACACGGAATCATTTGGTGCTTGCTTGCTTCTTACGCTTCCAGAAGATGTGTTTACT 83
||||||||||||| ||||||||||||||||||||||| ||||||||||||| | ||| |
Sbjct 1 ATGAACACGGAATTATTTGGTGCTTGCTTGCTTCTTATGCTTCCAGAAGATATCTTTGTT 60
Query 84 GTTATCTCTCGTTTTCTTTCACCAAGCGACATTTGCAATCTAATCTTGTGCGGCAAAAGT 143
|||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||
Sbjct 61 GTTATCTCTCGTTTTCTTTCTCCAAGCGATATTTGCAACCTAATCTTGTGCGGCAAAAGT 120
Query 144 CTTTGTGCCCTTGTCGATTCCGAGAAGACGTGGCTTGTGCAATGTGAAGAAGTAAAGGTT 203
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 121 CTTCGTGCCCTTGTCGATTCCGAGAAGACATGGCTTGTGCAATGTGAAGAAGTAAAGGTT 180
Query 204 CTTCCTTTGTTTGAAATAGTCCAATGGCGAAGCGGGATCTCTTCTTACAAGGCACTTTGT 263
||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct 181 CTTCCTTTGTTGGAAATAGTCCAATGGCGAATCGGGATCTCTTCTTACAAGGCCCTTTGT 240
Query 264 AGGTTTCTTGTAGAGGTGGTGAAGCCTCTTGTTGGGATTTGGGTTCAACAAAACCCTGAA 323
|||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||
Sbjct 241 AGGTTTCTTGTAGAGGTGGTGAAGCCGCTTCTTGGGATTTGGGTGCAACAAAACCCTGAA 300
Query 324 CTTGGGAATGTCGTTTATGTCATGCCTGGTTTCTTGTCTGTTGTTGGGTGCCGGATAATT 383
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 301 CTTGGGAATGTTGTTTATGTGATGCCTGGTTTCTTGTCTGTTGTTGGGTGCCGGATAATT 360
Query 384 CCACAAAAGGTTGGTCCTTTGTGGATTCAAGAGGGCCGAGTTAAGTGGTCACCTGTGTTT 443
||||||||||||| ||||| |||||||||||||| |||||||||||||||||| ||||||
Sbjct 361 CCACAAAAGGTTGCTCCTTCGTGGATTCAAGAGGACCGAGTTAAGTGGTCACCGGTGTTT 420
Query 444 GAGATAATCTGCGGTTTTGATGGCTCTACCGGGTTTTTCCTTCATGGAAGAGACAAAGAA 503
|||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct 421 GAGATAATCTGCGGGTTTGATGGCTCTAACGGGTTTTTCCTCCATGGAAGAGACAAAGAA 480
Query 504 GGCAGTTGCTTGTACCCTGGTTTTGTTATGGGCATTGAGAAGAGTTGCAATTTGCTTCAA 563
||||||||||||||||||||||||||||||||||||||||||| |||| || | |||||
Sbjct 481 GGCAGTTGCTTGTACCCTGGTTTTGTTATGGGCATTGAGAAGAATTGCGATGTACTTCAG 540
Query 564 CTCGAAATTGAGCCGAGGCGAGAGAAGAGTTCGTGCAATGAGATTGAGAGAGGAGCCTCA 623
|||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 541 CTCGAAGTTGTGCCGAGGCAAGAGAAGAGTTCGTGCAATGAGATTGAGAGAGGAGCCTC- 599
Query 624 AGAAAGGGGGAAAAGGAGGGAGAGGTTCCATTTTGGATGCTCGCTTTTAGCGATAGAAAA 683
|| | ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 600 ---AA----G-AAAGGAGGGAGAGATTCCATTTTGGATGCTCGCTTTTAGCGATAGAAAA 651
Query 684 AACTTACTCAATATTGTGACAAGCCATGTAGGTATACATGTGGTGGAGCCATTAAATGGA 743
|||| ||||||||||| |||| |||||||||| ||||||||||||| |||||||||| |
Sbjct 652 CACTTGCTCAATATTGTCACAAACCATGTAGGTCTACATGTGGTGGAACCATTAAATGAA 711
Query 744 AGGTTATTTCCCACATCAAAAGATGATGAAGCAATGTTG-GTCGAACGCAGAACCATGCT 802
| |||||||||||||| ||||||||||||| || | || | |||||||||||||| ||
Sbjct 712 ATGTTATTTCCCACATTGAAAGATGATGAAGTAAAGCTGAAT-GAACGCAGAACCATTCT 770
Query 803 CTTTAAAATGCACAAGTTTGGTGGAAAGTGGAAGAACATGAATTTGGAGGAGGATGATCA 862
| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct 771 CCTTAAAATGCACAAGTTTGGTGGAAATTGGAAGAACATGAATTTGGAGGAGGATGGTCA 830
Query 863 GTTGTGTTACAATCCTATGCAGCTAGACATAAACGAGATGTTGGAAAATCTTGGTGATGA 922
|||| |||||||||| |||||| || | ||||||||||||||||||||||| | ||||||
Sbjct 831 GTTGAGTTACAATCCCATGCAGGTAAAAATAAACGAGATGTTGGAAAATCTCGATGATGA 890
Query 923 CTGGTTTTTTGACA-TGGAAGAGGAGCTGATAGAGGTCACACCAACGGAGAGCACGCATG 981
|| |||||||| | || | ||||| |||||||||||||||||||| |||||||| |||
Sbjct 891 CTTTTTTTTTGA-ATTGCATGAGGATCTGATAGAGGTCACACCAACAGAGAGCACATATG 949
Query 982 TTTTAGGGGAGTCTAGTTCTTCAAAGAACACAGCACCTTCG-AGCAGTGAAATTAGACAT 1040
||||| || ||||||||||||||||||||||| |||||||| || |||||||||||||||
Sbjct 950 TTTTACGGAAGTCTAGTTCTTCAAAGAACACAACACCTTCGCAG-AGTGAAATTAGACAT 1008
Query 1041 TCGAATCGCCAAAGCTTTCTTAGCTCTGGTGATACATTTGGTCTTAGTCTCAAAGCTTCC 1100
||||||||| |||||||||||||||||||||||||||| |||||| | ||||||||||||
Sbjct 1009 TCGAATCGCAAAAGCTTTCTTAGCTCTGGTGATACATTCGGTCTTGGACTCAAAGCTTCC 1068
Query 1101 TACTCTGAGCTAAATTCTTACGAAGGGTGGCCATACATGTACGCT-CATCACTTTTCACT 1159
||| ||||| | || ||| ||||||||||| ||||||||| | || ||||||| |||
Sbjct 1069 TACACTGAGATGTCTTATTATAAAGGGTGGCCAGACATGTACG-TACACCACTTTTTACT 1127
Query 1160 TTATAAACTACCGGTTAAGAAATTCGTTGATCACGAAGTCGAAGTGTATGCCGGTTTGTG 1219
||||||||||| ||||||||| ||| ||||||| | || |||||| ||||||||
Sbjct 1128 CTATAAACTACCAGTTAAGAAAGCCGTCGATCACG-A----AA-CGTATGCTGGTTTGTG 1181
Query 1220 GGGAGGAACGTTTGGCTGGCCAGCTGGGAAATGTCCTAAAAGTAAGCCCGAAAAGTCTCT 1279
||||||||||||||||||||||||||| |||||||||||| ||||| | |||||||||||
Sbjct 1182 GGGAGGAACGTTTGGCTGGCCAGCTGGAAAATGTCCTAAAGGTAAGACGGAAAAGTCTCT 1241
Query 1280 TTACTTACTGATGCTCACTTATGAAGAATCTGAAGAGTATAATGAGAGAGTTCTCATTGG 1339
||||||||||||||||||||||||| || ||| |||| ||||||||||||||||||
Sbjct 1242 TTACTTACTGATGCTCACTTATGAAAAA---GAA---TATAGTGAGAGAGTTCTCATTGG 1295
Query 1340 GACAAAAATACTCGAAGGAAAGCGC-TATGTGAGGCGTCCCAATGGAACTGCAATGTTTA 1398
|||||||||||| |||||||| ||| | |||||| ||||||||||||||| ||||||||
Sbjct 1296 GACAAAAATACTGGAAGGAAATCGCCT-TGTGAGCCGTCCCAATGGAACTACAATGTTTG 1354
Query 1399 TTGTAAATATCGATACACCTACCCTTGAGCCCTTTCCGGTGGATGCAGATGAAATAGATT 1458
||||||| |||||||||||| | |||||||||||||| |||||||||||||||||| |||
Sbjct 1355 TTGTAAAAATCGATACACCTTCTCTTGAGCCCTTTCCAGTGGATGCAGATGAAATACATT 1414
Query 1459 TTGAGAATTCTTACTCGGGAAACGGTATCGCAGAAGGTTACGGATTCCGCTATCCCGGTT 1518
|||||||||||||||||||||| ||| || |||| ||||| ||||||||||||| |||||
Sbjct 1415 TTGAGAATTCTTACTCGGGAAAAGGTGTCACAGATGGTTATGGATTCCGCTATCTCGGTT 1474
Query 1519 CAAAACCTGGTTCCCTTTTCGTGATCACTAATGATCTTCTTGCATTCGTTTGGCAAGAAA 1578
| ||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| |
Sbjct 1475 CTAAACCCGGTTCCCTTTTCGTGATCACTAATGATTTTCTTGCATTCGTTTGGAAAGACA 1534
Query 1579 CCAAAGA-TGTGATTACGTTGCAAAGACTAAACCTTGCAGAGATCTTGAAGAAAGTTTTA 1637
||||| | | ||||||||||||| |||||||||||| |||||||||||||||| | |||
Sbjct 1535 CCAAA-ACTATGATTACGTTGCATAGACTAAACCTTACAGAGATCTTGAAGAAGGGTTTG 1593
Query 1638 GGTTCTTGTGTGCCGCCTTTGCCTCCAACT-AAGAATTTTACTTATATGAGAAGGTCCTA 1696
|| |||||||||||||||| || ||| | | |||||||||||||||||||||| |||||
Sbjct 1594 GGATCTTGTGTGCCGCCTTCGCATCCTA-TGAAGAATTTTACTTATATGAGAACGTCCTC 1652
Query 1697 CATAAACGAGTTTACCAAG-TCATCGACCGATCCGTCTTACTCCGAC 1742
||| ||||||||||||| | ||||| || ||| || ||||||||||
Sbjct 1653 CATGAACGAGTTTACCA-GCTCATCAACTGATTTGTGTTACTCCGAC 1698
> AT5G39460.1 | Symbols: | F-box family protein | chr5:15788289-15790004
REVERSE LENGTH=1716
Length=1716
Score = 994 bits (538), Expect = 0.0
Identities = 798/916 (87%), Gaps = 47/916 (5%)
Strand=Plus/Plus
Query 21 ATGATGAACACGGAATCATTTGGTGCTTGCTTGCTTCTTACGCTTCCAGAAGATGTGTTT 80
|||||||||| |||||| ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 1 ATGATGAACAAGGAATCGTTTGGAGCTTGCTTGCTTCTTACGCTTCCCGAAGATGTGTTT 60
Query 81 ACTGTTATCTCTCGTTTTCTTTCACCAAGCGACATTTGCAATCTAATCTTGTGCGGCAAA 140
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 61 GCTGTTATCTCTCGTTTTCTTTCTCCAAGCGACATTTGCAATCTAATCTTGTGCGGCAAA 120
Query 141 AGTCTTTGTGCCCTTGTCGATTCCGAGAAGACGTGGCTTGTGCAATGTGAAGAAGTAAAG 200
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 AGTCTTTGTGCCCTTGTCGATTCCGAGAAGACGTGGCTTGTGCAATGTGAAGAAGTAAAA 180
Query 201 GTTCTTCCTTTGTTTGAAATAGTCCAATGGCGAAGCGGGATCTCTTCTTACAAGGCACTT 260
|||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||| |||
Sbjct 181 GTTCTTCCTTTGATTGAACTAGTCCAATGGCGAATCGGGATCTCTTCTTACAAGGCCCTT 240
Query 261 TGTAGGTTTCTTGTAGAGGTGGTGAAGCCTCTTGTTGGGATTTGGGTTCAACAAAACCCT 320
|||||||||||||| |||||||||||||| ||| ||||||||||||| ||| ||||||||
Sbjct 241 TGTAGGTTTCTTGTGGAGGTGGTGAAGCCGCTTCTTGGGATTTGGGTGCAAGAAAACCCT 300
Query 321 GAACTTGGGAATGTCGTTTATGTCATGCCTGGTTTCTTGTCTGTTGTTGGGTGCCGGATA 380
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 301 GAACTTGGGAATGTTGTTTATGTGATGCCTGGTTTCTTGTCTGTTGTTGGGTGCCGGATA 360
Query 381 ATTCCACAAAAGGTTGGTCCTTTGTGGATTCAAGAGGGCCGAGTTAAGTGGTCACCTGTG 440
|||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||| |||
Sbjct 361 ATTCCACAAAAGGTTGCTCCTTTGTGGATTCAAGAGGGCCAAGTCAAGTGGTCACCGGTG 420
Query 441 TTTGAGATAATCTGCGGTTTTGATGGCTCTACCGGGTTTTT-CCTTCATGGAAGAGACAA 499
||||||||||| ||||| ||||||||||||| |||||||| ||| ||||||||||||||
Sbjct 421 TTTGAGATAATTTGCGGCTTTGATGGCTCTAA-GGGTTTTTTCCTCCATGGAAGAGACAA 479
Query 500 AGAAGGCAGTTGCTTGTACCCTGGTTTTGTTATGGGCATTGAGAAGAGTTGCAATTTGCT 559
| |||| |||| ||| ||||||||||| ||||||| ||| ||||||||||||||| ||||
Sbjct 480 ACAAGGTAGTTTCTTATACCCTGGTTTCGTTATGGACATCGAGAAGAGTTGCAATGTGCT 539
Query 560 TCAACTCGAAATTGAGCCGAGG-CGAGAGAAGAGTTCGTGCAATGAGATTGAGAGAGGAG 618
|| ||||||| ||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct 540 TCTACTCGAAGTTGAGCCGAGGTC-AGAGAAGAGTTCGTGCAATGAGATTGAGAGAGAAG 598
Query 619 CCTCAAGAAAGGGGGAAAAGGAGGGAGAGGTTCCATTTTG-GATGCTCG-CTTTTAGCGA 676
| | | ||| | | |||||| | ||| || | ||| || ||
Sbjct 599 --T-A-G---GGG--A--------------T-CCATTTGGAGAT-CTAGACTTC-AGTGA 632
Query 677 TAGAAAAAACTTACTCA-ATATTGTGACAAGCCATGTAGGTATAC-ATGTGG-TGGAGCC 733
||||| |||||||| | |||| ||||||| |||||| || ||| | || | || | ||
Sbjct 633 TAGAATGAACTTACT-AGATATAGTGACAAAACATGTAAGTCTACGA-GTCGATGAA-CC 689
Query 734 ATTAA-ATGGAAGGTTATTTCCCAC-A--TCAAAAGATGATGAAGCAATGTTGGTCGAAC 789
||||| | |||| ||||||||||| | |||||| |||| ||||| ||| || | ||||
Sbjct 690 ATTAACA-GGAAATTTATTTCCCACCAGGTCAAAATATGACGAAGCGATGATGTTGGAAC 748
Query 790 GCAGAACCATGCTCTTTAAAATGCACAAGTTTGGTGGAAAGTGGAAGAACATGAATTTGG 849
|||||| ||||||| ||||||||| ||| ||||||||||| |||||| |||| || ||||
Sbjct 749 GCAGAAACATGCTCCTTAAAATGCTCAAATTTGGTGGAAACTGGAAGCACATAAACTTGG 808
Query 850 AGGAGGATGATCAGTTGTGTTACAATCCTAT-GCAGCTAGACATAAACGAGAT-GTTGGA 907
|||||||||| |||||||||||||||| ||| | || |||||||||| | || ||||||
Sbjct 809 AGGAGGATGAGCAGTTGTGTTACAATCATATAG-AGATAGACATAAAAAA-ATTGTTGGA 866
Query 908 AAATCTTGGTGATGAC 923
||||||||||||||||
Sbjct 867 AAATCTTGGTGATGAC 882
Score = 549 bits (297), Expect = 3e-155
Identities = 614/760 (81%), Gaps = 49/760 (6%)
Strand=Plus/Plus
Query 996 AGTTCTTCAAAGAACACA-GCACCTTCGAGCAGTGAAATTAGACATTCGAATCGCCAAAG 1054
||||||||||||| || | | |||||||||||||| | |||| |||||||||||||||
Sbjct 988 AGTTCTTCAAAGATCA-ATTCGCCTTCGAGCAGTGAGACAAGACGTTCGAATCGCCAAAG 1046
Query 1055 CTTTCTTAGCTCTGGTGATACATTTGGTCTTAGTCTCAAAGCTTCCT--ACTCTGAGCTA 1112
|||||| ||||||||| |||||||| | |||||||| |||||||| | ||| ||| |
Sbjct 1047 CTTTCTCAGCTCTGGTAATACATTTTGCCTTAGTCTTAAAGCTTCATGCACTTTGA--TG 1104
Query 1113 AATTCTTACGAAGGGTGGCC-ATACATGTACGCTCA-TC-ACTTTTCACTTTATAAACTA 1169
||| || ||||||||||| || |||| | || || | ||||||| ||| ||||||||
Sbjct 1105 TCTTCATATGAAGGGTGGCCAAT-CATG-A-GCGCAGACAACTTTTCCCTTCATAAACTA 1161
Query 1170 CCGGTTAAGAAA-TTCGTTGATCACGAAGTCGAAGTGTATGCCGGTTTGTGGGGAGGAAC 1228
|| | |||||| || | ||||||| | | |||||||| |||||||||||||||||
Sbjct 1162 CCAATGAAGAAACCTC-TCGATCACG-A--C---GTGTATGCGGGTTTGTGGGGAGGAAC 1214
Query 1229 GTTTGGCTGGCCAGCTGGGAAATGTCCTAAAAGTAAGCCCGAAAAGTCTCTT-TACTTAC 1287
|||||||||||| |||||||| | | | | || || |||| ||| | ||||
Sbjct 1215 GTTTGGCTGGCCCCCTGGGAAA-G--AT-ATTG-AA----GATGAGTCCCTTCT-CTTAT 1264
Query 1288 TGATGCTCACTTATGAAGAATCTGAAGAGTATAATGAGAGAGTTCTCATT-GGGACAAAA 1346
| ||||||||||||| ||||||||||||| || ||||||| |||| || ||||| |||
Sbjct 1265 TAATGCTCACTTATGGAGAATCTGAAGAGGGTAGTGAGAGAATTCT-TTTCGGGACGAAA 1323
Query 1347 ATACTCGAAGGAAAGCGCTATG-TGAGGCGTCCCAATGGA-ACTGCAATGTTTATTGTAA 1404
|||||| | | | | || ||| || ||| |||||| || |||||||| ||||||
Sbjct 1324 ATACTC--A-GTTA---TTTTGCTGA-GCATCCTAATGGATCCT-CAATGTTTGTTGTAA 1375
Query 1405 ATATCGATACACCTACCCTTGAGCCCTTTCCGGTGGATGCAGATGAAATAGATTTTGAGA 1464
|||| || || ||| |||||||||| ||||| | ||| |||||| || |||||| |||
Sbjct 1376 ATATTGACACGCCTTCCCTTGAGCCGTTTCCATTTGATACAGATGGAAGAGATTTCGAGC 1435
Query 1465 ATTCTTACTCGGGAAACGGTATCGCAGAAGGTTACGGATTCCGCTATCCCGGTTCAAAAC 1524
|||||||| ||||| | |||||||| || ||||| |||||||| || |||||||||||||
Sbjct 1436 ATTCTTACACGGGAGAGGGTATCGCTGACGGTTATGGATTCCGATACCCCGGTTCAAAAC 1495
Query 1525 CTGGTTCCCTTTTCGTGATCACTAATGATCTTCTTGCATTCGTTTGGCAAGAAACCAAAG 1584
|||||||||||||||| | | |||||||||||||||||||||||||||||| ||| |||
Sbjct 1496 CTGGTTCCCTTTTCGTAAGCTCTAATGATCTTCTTGCATTCGTTTGGCAAGGAACTGAAG 1555
Query 1585 ATGTGATTACGTTGCAAAGACTAAACCTTGCAGAGATCTTGAAGAA-AGTTTTAGGTTCT 1643
|||||||||| ||||||||| ||||||||| ||||||||||||||| ||||| |||||||
Sbjct 1556 ATGTGATTACATTGCAAAGAATAAACCTTGGAGAGATCTTGAAGAAGAGTTT-AGGTTCT 1614
Query 1644 TGTGTGCCGCCTTTGCCTCCAACTAAGAATTTTACTTATA-TGAGAAGGTCCTACAT-AA 1701
||||| | ||||||| |||||| ||||||||||| |||| | | |||||| ||| | ||
Sbjct 1615 TGTGTTTCACCTTTGCTTCCAACAAAGAATTTTACATATACTAA-AAGGTCTTAC-TCAA 1672
Query 1702 ACGAGTTTACCAAGTCATCGACCGATCCGTCTTACTCCGA 1741
||| |||| |||||||||||||| || |||||| ||||||
Sbjct 1673 ACGTGTTTGCCAAGTCATCGACCTATTCGTCTTCCTCCGA 1712
> AT5G39450.1 | Symbols: | F-box family protein | chr5:15785717-15787946
FORWARD LENGTH=2137
Length=2137
Score = 686 bits (371), Expect = 0.0
Identities = 693/843 (82%), Gaps = 44/843 (5%)
Strand=Plus/Plus
Query 33 GAATCATTTGGTGCTTGCTTGCTTCT-TACGCTTCCAGAAGATGTGT-TTACTGTTATCT 90
|||||||||||| ||||||||||||| | | |||||||||||||| | || |||||||
Sbjct 362 GAATCATTTGGTACTTGCTTGCTTCTGT-CTCTTCCAGAAGATGT-TATTGCTGTTATAG 419
Query 91 CTCGTTTTCTTTCACCAAGCGACATTTGCAATCTAATCTTGTGCGGCAAAAGTCTTTGTG 150
| |||||| | || ||||| |||||||||||||| | ||| ||| |||||||||| ||||
Sbjct 420 CACGTTTTGTATCTCCAAGAGACATTTGCAATCTGAGCTTATGCTGCAAAAGTCTATGTG 479
Query 151 CCCTTGTCGATTCCGAGAA-GA-CGTGGCTTGTGCAATGTGAAGAAGTAAAGGTTCTTCC 208
| |||| ||||| || || || | ||||||||||| ||||||| |||||||||||||||
Sbjct 480 ACGTTGTGGATTCAGA-AAGGATC-TGGCTTGTGCAGTGTGAAGTAGTAAAGGTTCTTCC 537
Query 209 TTTGTTTGAAATAGTCCAATGGCGAAGCGGGATCTCTTCTTACAAGGCACTTTGTAGGTT 268
||| | ||||||| |||||||||||| ||||| |||||||| ||||| |||||| ||||
Sbjct 538 TTTATCTGAAATAATCCAATGGCGAATTGGGATTTCTTCTTATAAGGCGCTTTGTTGGTT 597
Query 269 TCTTGTAGAGGTGGTGAAGCCTCTTGTTGG-GATTTGGGTTCAACAAAACCCTGAACTTG 327
||||| |||||| |||||||||||||||| | |||||||||| ||||||||||||||||
Sbjct 598 TCTTGGAGAGGTAATGAAGCCTCTTGTTGGTG-TTTGGGTTCATCAAAACCCTGAACTTG 656
Query 328 GGAATGTCGTTTATGTCATGCCTGGTTTCTTGTCTGTTGTTGGGTGCCGGATAATTCCAC 387
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 657 GGAATGTTGTTTATGTCATGCCTGGTTTCTTGTCTGTTGTTGGGTGTCGGATAATTCCAC 716
Query 388 AAAAGGTTGGTCCTTTGTGGATTCAAGAGGGC-CGAGTTAAGTGGTCACCTGTGTTTGAG 446
|| |||||||||||||| ||||| | |||| | ||||||| |||||||||||||||||||
Sbjct 717 AAGAGGTTGGTCCTTTGGGGATTGAGGAGG-CTCGAGTTATGTGGTCACCTGTGTTTGAG 775
Query 447 ATAATCTGCGGTTTTGATGGCTCTACCGGGTTTTTCCTTCATGGAAGAGACA-AAGAAG- 504
|| ||||| |||||||||||||| || ||||||||| ||||| ||||| || |||
Sbjct 776 ATTATCTGTGGTTTTGATGGCTCCGCCAAGTTTTTCCTCCATGGGAGAGATGGAA-AAGT 834
Query 505 GCAGTTGCT-TGT--ACCCTGGTTTTGTTATGGGCATTGAGAAGAGTTGCAATTTGCTTC 561
||| | ||| | | |||||||||| |||| |||||||||||||||||| ||| ||||||
Sbjct 835 GCAAT-GCTGTCTGCACCCTGGTTTCGTTAGGGGCATTGAGAAGAGTTGTAATGTGCTTC 893
Query 562 AACTCGAAATTGAGCCGAGGCGAGAGAAGA-GTTCGTGCAATGAGATTGA-GAGAG-GAG 618
||| || ||||| ||||||||||||||| ||| ||||||||||||||| |||| | |
Sbjct 894 TACTTGAGGTTGAGACGAGGCGAGAGAAGAAGTT-GTGCAATGAGATTGATGAGACTGTG 952
Query 619 CCTCAAGAAAGGGGGAAAAGGAGGGAG-AGGTT-CCATTTTGGATGCT-CGCTTTTAGCG 675
| | || || | || ||| || || |||||| | | || | | |||||
Sbjct 953 T-T---GTT-GGTAGAGACGG-GGGTTCAG-TTACCATTTCGCAAACTAC-CATTTAGTT 1004
Query 676 ATAGAAAAAACTTACT-CA-ATATTGTGACAAGC-CATGTAGGTATACATGTGG-TGGAG 731
|||||| || ||||| || ||| ||||||||| | ||| ||||||| ||| || |
Sbjct 1005 ATAGAAGGAATTTACTTCACATA--GTGACAAGCAC-TGTTGGTATACCTGTACCTG-AT 1060
Query 732 CCATTAAATGGAAGGTTATTTCCCACATCAAAAGATGATGAAGCAATGTTGGTCGAACGC 791
| || || || || ||||||||| || ||||||||||||||||| ||||| | ||||||
Sbjct 1061 CTATCAAGTGAAAAGTTATTTCCTACGTCAAAAGATGATGAAGCGGTGTTGTTGGAACGC 1120
Query 792 AGAACCATGCT-CTTTAAAATGCACAAGTTTGGTGGAAAGTGGAAGAACATGAATTTGGA 850
||||||||||| ||| |||||||||||||||||||| | ||||| ||||||| ||||
Sbjct 1121 AGAACCATGCTTCTT-AAAATGCACAAGTTTGGTGGTGATTGGAATCACATGAACCTGGA 1179
Query 851 GGA 853
|||
Sbjct 1180 GGA 1182
> AT5G39470.1 | Symbols: | F-box family protein | chr5:15791952-15793062
REVERSE LENGTH=513
Length=513
Score = 219 bits (118), Expect = 1e-55
Identities = 148/163 (91%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 40 TTGGTGCTTGCTTGCTTCTTACGCTTCCAGAAGATGTGTTTACTGTTATCTCTCGTTTTC 99
|||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||
Sbjct 272 TTGGTGCTTGCTTGCTTCTTACGCTTCCCGAAGATGTGTTTTCTGTTATCTCTCACTTTC 331
Query 100 TTTCACCAAGCGACATTTGCAATCTAATCTTGTGCGGCAAAAGTCTTTGTGCCCTTGTCG 159
|||| ||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||
Sbjct 332 TTTCTCCAAGCGACATTTGCGATATAATCTTTTGCTGCAAAAGTCTTTGTGCCCTTGTCG 391
Query 160 ATTCCGAGAAGACGTGGCTTGTGCAATGTGAAGAAGTAAAGGT 202
||||||||||||| |||||||| |||| ||||| || |||||
Sbjct 392 ATTCCGAGAAGACATGGCTTGTTCAATATGAAGTCGTTAAGGT 434
Score = 78.7 bits (42), Expect = 2e-13
Identities = 52/56 (93%), Gaps = 4/56 (7%)
Strand=Plus/Plus
Query 277 AGGTGGTGAAGCCTCTTGTTGGGATTTGGGTTCAACAA-AACCCTG-AACTTGGGA 330
||||||||||||||||||||||||||||||||||| || ||||||| || ||||||
Sbjct 431 AGGTGGTGAAGCCTCTTGTTGGGATTTGGGTTCAA-AAGAACCCTGTAA-TTGGGA 484
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 87499549935
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5