BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg947956 Length=344 Score E Sequences producing significant alignments: (Bits) Value AT5G38770.1 | Symbols: AtGDU7, GDU7 | glutamine dumper 7 | chr5... 374 4e-103 > AT5G38770.1 | Symbols: AtGDU7, GDU7 | glutamine dumper 7 | chr5:15526114-15526407 FORWARD LENGTH=294 Length=294 Score = 374 bits (202), Expect = 4e-103 Identities = 273/305 (90%), Gaps = 13/305 (4%) Strand=Plus/Plus Query 21 ATGAGTCTGGATAGTGATTCAATGGTCCCGGTT-ACTTCCGGGTTAGAAAACTTAAACTC 79 ||||||||| |||| |||||||||||||||||| || ||| ||||||| ||| | |||| Sbjct 1 ATGAGTCTGCATAGGGATTCAATGGTCCCGGTTAAC-TCCAGGTTAGAGAACATGGACTC 59 Query 80 TCCAATTCTCTCCAAGATTTGTGCGTGGGGAGTAATGTTGGGGCTATTTGCGATTTCATT 139 ||| |||||||| ||||||||||||||||| |||||| ||||||| |||||| ||||||| Sbjct 60 TCCGATTCTCTCTAAGATTTGTGCGTGGGGCGTAATGCTGGGGCTCTTTGCGCTTTCATT 119 Query 140 GA-TCGCTATGGCCTATGCTTGCTATCACAAGCAACACGCTTCGAATTCATGTATCGAAG 198 | ||||||||||||||||||||||||| |||||| | ||||||||||||| ||||||| Sbjct 120 -ATTCGCTATGGCCTATGCTTGCTATCATAAGCAA-A--CTTCGAATTCATGCATCGAAG 175 Query 199 AGCAAGAGAAATCAGGAAAGAAGCAAGTGTTGAAGCCACTAGATATGGAACCAAAGATTG 258 || | | | | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 176 AG--A-A-ACA--AGGAAAGAAGCAAGTGTTGAAGCCACTAGATATGGAACCAAAGATTG 229 Query 259 TTGTTATAATGGCTGGTAATGAAAACCCTACCTTCTTTGCCAAGCCAACCAAGATCAATG 318 |||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct 230 TTGTAATAATGGCTGGTAATGAAAACCCTACCTTCTTTGCTAAGCCAACCCAGATCAATG 289 Query 319 CATGA 323 ||||| Sbjct 290 CATGA 294 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 16085679680 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5