BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg948034 Length=485 Score E Sequences producing significant alignments: (Bits) Value AT5G38317.1 | Symbols: LCR58 | low-molecular-weight cysteine-ri... 473 5e-133 > AT5G38317.1 | Symbols: LCR58 | low-molecular-weight cysteine-rich 58 | chr5:15314060-15315226 FORWARD LENGTH=384 Length=384 Score = 473 bits (256), Expect = 5e-133 Identities = 310/335 (93%), Gaps = 7/335 (2%) Strand=Plus/Plus Query 134 TCT-AGTTGTGAATCAGACAAGAGCA-ATTTCATGCGATGAAAGCT-TAGGCCTTTGCAA 190 ||| || ||| ||||||||||||||| | ||||||||||||||| | ||||||||||| | Sbjct 53 TCTCAGGTGTTAATCAGACAAGAGCAGA-TTCATGCGATGAAAG-TCTAGGCCTTTGCGA 110 Query 191 AAAATGTGACGAAAGATGCAAGGCCAAACACGGACCATCATGCATAAGCAAATGTGATGG 250 || |||||||||||||||| ||||||||||||| ||||| ||||||||||||||||| || Sbjct 111 AACATGTGACGAAAGATGCCAGGCCAAACACGGGCCATCGTGCATAAGCAAATGTGACGG 170 Query 251 AGAGGTTGGGATGTTGTCGTGCACATGCACTTACGAGTGTGGACCAACTTTACCCCCCAA 310 |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 171 AGAGGTTGGGATGTTGTCGTGCACGTGCACTTACGAGTGTGGACCACCTTTACCCCCCAA 230 Query 311 AAGAAACGTTTGCAGCGGTGGGACTGGTATGTGCAGTGGGAATTGTCC-TGATAAATGTT 369 | | ||||||||||||||||||||||||||||||||||| || ||||| | ||||||||| Sbjct 231 AGGTAACGTTTGCAGCGGTGGGACTGGTATGTGCAGTGGAAAGTGTCCAT-ATAAATGTT 289 Query 370 GTGATACCAACTGCGCACAAAAGTATAATGGTGGACGTGGATTTTGTAACTCCCTTGGTA 429 ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 290 GTGATACCAGTTGCGCACAAAAGTATAATGGTGGACGTGGATTTTGTAACTCCTTTGGTA 349 Query 430 ATTATAATTTGTGCCAATGCGAATACCCTTGCTAA 464 |||||||||| |||||||||||||||||||||||| Sbjct 350 ATTATAATTTTTGCCAATGCGAATACCCTTGCTAA 384 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23107707620 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5